FFCP PHASE1:Hg19::chr6:135679339..135679355,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:135679339..135679355,- | |||
|description=CAGE_peak_at_chr6:135679339..135679355,- | |description=CAGE_peak_at_chr6:135679339..135679355,- | ||
|id=chr6:135679339..135679355,- | |id=chr6:135679339..135679355,- | ||
|ontology_enrichment_celltype=CL:0000359!1.06e-34!32;CL:0000192!2.37e-33!42;CL:0000514!2.37e-33!42;CL:0000680!8.30e-31!57;CL:0000056!8.30e-31!57;CL:0000355!8.30e-31!57;CL:0000055!1.65e-29!180;CL:0000187!1.57e-27!54;CL:0000183!1.57e-25!59;CL:0000393!5.76e-25!60;CL:0000211!5.76e-25!60;CL:0000048!1.16e-13!430;CL:0002539!1.84e-13!10;CL:0000723!4.59e-13!436;CL:0000222!1.21e-12!119;CL:0000034!2.67e-12!444;CL:0002371!1.52e-11!591;CL:0000144!1.45e-10!625;CL:0000548!7.42e-09!679;CL:0000004!7.42e-09!679;CL:0000255!7.42e-09!679;CL:0000012!1.18e-08!682;CL:0002595!3.47e-08!5;CL:0000057!1.04e-07!75;CL:0000220!1.05e-07!246;CL:0002494!1.31e-07!16;CL:0002321!1.61e-07!248 | |ontology_enrichment_celltype=CL:0000359!1.06e-34!32;CL:0000192!2.37e-33!42;CL:0000514!2.37e-33!42;CL:0000680!8.30e-31!57;CL:0000056!8.30e-31!57;CL:0000355!8.30e-31!57;CL:0000055!1.65e-29!180;CL:0000187!1.57e-27!54;CL:0000183!1.57e-25!59;CL:0000393!5.76e-25!60;CL:0000211!5.76e-25!60;CL:0000048!1.16e-13!430;CL:0002539!1.84e-13!10;CL:0000723!4.59e-13!436;CL:0000222!1.21e-12!119;CL:0000034!2.67e-12!444;CL:0002371!1.52e-11!591;CL:0000144!1.45e-10!625;CL:0000548!7.42e-09!679;CL:0000004!7.42e-09!679;CL:0000255!7.42e-09!679;CL:0000012!1.18e-08!682;CL:0002595!3.47e-08!5;CL:0000057!1.04e-07!75;CL:0000220!1.05e-07!246;CL:0002494!1.31e-07!16;CL:0002321!1.61e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.91e-27;32!CL:0000192;1.04e-15;43!CL:0002595;3.77e-11;5!CL:0002592;1.58e-10;3!CL:0002582;1.92e-10;3!CL:0002494;1.00e-08;16!CL:0002593;1.53e-07;2!CL:0002539;1.62e-07;10!CL:0002594;1.77e-07;4!CL:0000187;3.30e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.51e-28,32;CL:0000192,5.24e-22,43;CL:0000514,5.24e-22,43;CL:0000680,5.61e-19,58;CL:0000056,5.61e-19,58;CL:0000355,5.61e-19,58;CL:0000187,3.82e-16,55;CL:0000393,4.34e-14,61;CL:0000211,4.34e-14,61;CL:0002595,4.96e-11,5;CL:0002592,1.18e-10,3;CL:0002582,2.33e-10,3;CL:0002494,6.32e-09,16;CL:0000048,2.07e-08,427;CL:0000723,3.93e-08,433;CL:0000222,4.20e-08,121;CL:0000034,8.96e-08,441;CL:0002539,1.55e-07,10;CL:0002594,1.57e-07,4;CL:0002593,2.09e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.04e-15;43!CL:0000355;1.31e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!1.56e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.12e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.78e-11,14 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001637,8.80e-26,42;UBERON:0003509,8.80e-26,42;UBERON:0004572,8.80e-26,42;UBERON:0004573,1.02e-18,33;UBERON:0004571,1.02e-18,33;UBERON:0001134,2.10e-17,62;UBERON:0002036,2.10e-17,62;UBERON:0003082,2.10e-17,62;UBERON:0007500,7.60e-17,59;UBERON:0001981,7.60e-17,59;UBERON:0004537,7.60e-17,59;UBERON:0006965,7.60e-17,59;UBERON:0002385,1.08e-16,64;UBERON:0001015,1.08e-16,64;UBERON:0000383,1.08e-16,64;UBERON:0003498,1.52e-16,5;UBERON:0005985,1.52e-16,5;UBERON:0004872,4.23e-16,83;UBERON:0002329,1.60e-14,71;UBERON:0003059,1.60e-14,71;UBERON:0007282,1.60e-14,71;UBERON:0004290,1.60e-14,71;UBERON:0009618,1.60e-14,71;UBERON:0002049,2.56e-14,78;UBERON:0007798,2.56e-14,78;UBERON:0003077,3.02e-14,72;UBERON:0007285,3.02e-14,72;UBERON:0007524,5.59e-14,73;UBERON:0000055,6.06e-14,68;UBERON:0004535,3.79e-13,109;UBERON:0007503,9.51e-13,78;UBERON:0001009,1.27e-12,112;UBERON:0000486,1.14e-11,83;UBERON:0003834,4.96e-11,5;UBERON:0001533,4.96e-11,5;UBERON:0003914,7.87e-11,117;UBERON:0001621,1.18e-10,3;UBERON:0000948,2.84e-09,24;UBERON:0005498,2.84e-09,24;UBERON:0004140,2.84e-09,24;UBERON:0009881,2.84e-09,24;UBERON:0004141,2.84e-09,24;UBERON:0003084,2.84e-09,24;UBERON:0007005,2.84e-09,24;UBERON:0004139,2.84e-09,24;UBERON:0004291,2.84e-09,24;UBERON:0007100,4.66e-08,27;UBERON:0002119,4.72e-08,4;UBERON:0000490,4.77e-08,148;UBERON:0005256,4.97e-08,122;UBERON:0003513,7.13e-08,7;UBERON:0000078,1.37e-07,2;UBERON:0007497,1.37e-07,2;UBERON:0003643,1.37e-07,2;UBERON:0003504,1.37e-07,2;UBERON:0003469,1.37e-07,2;UBERON:0003496,1.37e-07,2;UBERON:0002012,1.37e-07,2;UBERON:0008886,1.37e-07,2;UBERON:0007303,1.37e-07,2;UBERON:0002061,1.37e-07,2;UBERON:0005432,1.37e-07,2;UBERON:0004363,1.37e-07,2;UBERON:0004237,1.55e-07,10;UBERON:0004695,1.55e-07,10;UBERON:0002111,1.55e-07,10;UBERON:0004178,1.55e-07,10;UBERON:0001310,1.57e-07,4;UBERON:0002456,2.09e-07,2;UBERON:0000926,3.83e-07,315;UBERON:0004120,3.83e-07,315;UBERON:0006603,3.83e-07,315;UBERON:0003104,5.11e-07,160;UBERON:0009142,5.11e-07,160 | |||
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|short_description=p@chr6:135679339..135679355,- | |short_description=p@chr6:135679339..135679355,- | ||
}} | }} |
Latest revision as of 19:47, 30 July 2015
Short description: | p@chr6:135679339..135679355, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:135679339..135679355, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.51e-28 | 32 |
smooth muscle cell | 5.24e-22 | 43 |
smooth muscle myoblast | 5.24e-22 | 43 |
muscle precursor cell | 5.61e-19 | 58 |
myoblast | 5.61e-19 | 58 |
multi-potent skeletal muscle stem cell | 5.61e-19 | 58 |
muscle cell | 3.82e-16 | 55 |
electrically responsive cell | 4.34e-14 | 61 |
electrically active cell | 4.34e-14 | 61 |
smooth muscle cell of the subclavian artery | 4.96e-11 | 5 |
smooth muscle cell of the coronary artery | 1.18e-10 | 3 |
visceral preadipocyte | 2.33e-10 | 3 |
cardiocyte | 6.32e-09 | 16 |
multi fate stem cell | 2.07e-08 | 427 |
somatic stem cell | 3.93e-08 | 433 |
mesodermal cell | 4.20e-08 | 121 |
stem cell | 8.96e-08 | 441 |
aortic smooth muscle cell | 1.55e-07 | 10 |
smooth muscle cell of the umbilical artery | 1.57e-07 | 4 |
smooth muscle cell of the internal thoracic artery | 2.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.78e-11 | 14 |