FFCP PHASE1:Hg19::chr7:110764297..110764311,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:110764297..110764311,+ | |||
|coexpression_cluster_id=C941 | |||
|description=CAGE_peak_at_chr7:110764297..110764311,+ | |||
|id=chr7:110764297..110764311,+ | |||
|ontology_enrichment_celltype=CL:0002605!9.51e-10!3;CL:0000064!2.08e-08!3;CL:0005012!2.08e-08!3;CL:0000067!2.08e-08!3;CL:0002304!2.08e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002564;2.89e-12;3!CL:0002563;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,3.24e-12,3;CL:0002563,1.44e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.36e-19!34;UBERON:0003528!5.36e-19!34;UBERON:0001869!4.81e-18!32;UBERON:0002346!7.68e-18!90;UBERON:0001049!1.01e-17!57;UBERON:0005068!1.01e-17!57;UBERON:0006241!1.01e-17!57;UBERON:0007135!1.01e-17!57;UBERON:0003056!1.18e-17!61;UBERON:0003075!2.02e-17!86;UBERON:0007284!2.02e-17!86;UBERON:0002791!2.16e-17!33;UBERON:0002780!2.49e-17!41;UBERON:0001890!2.49e-17!41;UBERON:0006240!2.49e-17!41;UBERON:0002616!6.18e-17!59;UBERON:0003080!8.13e-17!42;UBERON:0001893!8.92e-17!34;UBERON:0000153!2.28e-16!129;UBERON:0007811!2.28e-16!129;UBERON:0000956!6.61e-16!25;UBERON:0000203!6.61e-16!25;UBERON:0000955!8.78e-15!69;UBERON:0006238!8.78e-15!69;UBERON:0000033!4.27e-14!123;UBERON:0001017!8.49e-13!82;UBERON:0000924!1.14e-12!173;UBERON:0006601!1.14e-12!173;UBERON:0000073!1.42e-12!94;UBERON:0001016!1.42e-12!94;UBERON:0004121!3.36e-12!169;UBERON:0005743!6.13e-12!86;UBERON:0002619!1.61e-10!22;UBERON:0001950!1.37e-09!20;UBERON:0002771!6.49e-09!3;UBERON:0001871!9.72e-09!7;UBERON:0001778!2.08e-08!3;UBERON:0001775!2.08e-08!3;UBERON:0002420!2.17e-07!9;UBERON:0007245!2.17e-07!9;UBERON:0010009!2.17e-07!9;UBERON:0010011!2.17e-07!9;UBERON:0000454!2.17e-07!9;UBERON:0001876!5.54e-07!2;UBERON:0007023!8.29e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.07e-17;2!UBERON:0002242;2.89e-12;3!UBERON:0001242;1.57e-09;4!UBERON:0001262;1.57e-09;4!UBERON:0004786;1.57e-09;4!UBERON:0004808;1.57e-09;4!UBERON:0001277;1.57e-09;4!UBERON:0011135;7.01e-08;5!UBERON:0002216;7.01e-08;5!UBERON:0011134;7.01e-08;5!UBERON:0002209;7.01e-08;5!UBERON:0002213;7.01e-08;5!UBERON:0007844;7.01e-08;5!UBERON:0011138;7.01e-08;5!UBERON:0001130;7.01e-08;5!UBERON:0001066;7.01e-08;5!UBERON:0001468;7.01e-08;5!UBERON:0000200;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.07e-17,2;UBERON:0002242,3.24e-12,3;UBERON:0003068,3.24e-12,3;UBERON:0002328,3.24e-12,3;UBERON:0004880,3.24e-12,3;UBERON:0001242,1.44e-09,4;UBERON:0001262,1.44e-09,4;UBERON:0004786,1.44e-09,4;UBERON:0004808,1.44e-09,4;UBERON:0001277,1.44e-09,4;UBERON:0011135,7.49e-08,5;UBERON:0002216,7.49e-08,5;UBERON:0011134,7.49e-08,5;UBERON:0002209,7.49e-08,5;UBERON:0002213,7.49e-08,5;UBERON:0005856,7.49e-08,5;UBERON:0005866,7.49e-08,5;UBERON:0005863,7.49e-08,5;UBERON:0007844,7.49e-08,5;UBERON:0011138,7.49e-08,5;UBERON:0001130,7.49e-08,5;UBERON:0001066,7.49e-08,5;UBERON:0001468,7.49e-08,5;UBERON:0000200,8.97e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0.572471974262113,0.410623275218653,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0,0.294605907474837,0,0,0.384273959177026,0.260118695119756,7.39970570716543,8.84320056914715,2.89803085735052,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0.999048047910651,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,1.22026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.54604819096007,0,0.425149840203366,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.0757786982182394,0.267964130156178,0.829169439458779,0,0,0.23806443146374,0.129177819672012,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr7:110764297..110764311,+ | |||
}} |
Latest revision as of 05:01, 31 July 2015
Short description: | p@chr7:110764297..110764311, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:110764297..110764311, + |
Coexpression cluster: | C941_CD4_Mast_Whole_parietal_Cardiac_temporal_gastric |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 3.24e-12 | 3 |
intestinal epithelial cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.07e-17 | 2 |
nucleus pulposus | 3.24e-12 | 3 |
axial mesoderm | 3.24e-12 | 3 |
notochord | 3.24e-12 | 3 |
chordamesoderm | 3.24e-12 | 3 |
intestinal mucosa | 1.44e-09 | 4 |
wall of intestine | 1.44e-09 | 4 |
gastrointestinal system mucosa | 1.44e-09 | 4 |
gastrointestinal system epithelium | 1.44e-09 | 4 |
intestinal epithelium | 1.44e-09 | 4 |
intervertebral cartilage | 7.49e-08 | 5 |
symphysis | 7.49e-08 | 5 |
nonsynovial joint | 7.49e-08 | 5 |
fibrous joint | 7.49e-08 | 5 |
cartilaginous joint | 7.49e-08 | 5 |
developing mesenchymal condensation | 7.49e-08 | 5 |
pre-cartilage condensation | 7.49e-08 | 5 |
cartilaginous condensation | 7.49e-08 | 5 |
cartilage element | 7.49e-08 | 5 |
post-cranial axial skeletal system | 7.49e-08 | 5 |
vertebral column | 7.49e-08 | 5 |
intervertebral disk | 7.49e-08 | 5 |
intervertebral joint | 7.49e-08 | 5 |
gyrus | 8.97e-07 | 6 |