FFCP PHASE1:Hg19::chr7:27208886..27208937,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:27208886..27208937,+ to FFCP PHASE1:Hg19::chr7:27208886..27208937,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=173bp_to_ENST00000523790_5end | |||
|cluster_id=chr7:27208886..27208937,+ | |||
|description=CAGE_peak_1_at_ENST00000523790_5end | |||
|id=chr7:27208886..27208937,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.67e-08!254;CL:1000497!2.18e-08!18;CL:0002518!2.18e-08!18;CL:1000507!1.13e-07!12;CL:1000494!1.13e-07!12;CL:1000449!5.43e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.08e-08;17!CL:0002518;1.08e-08;17!CL:0000244;1.63e-08;4!CL:0000731;1.63e-08;4!CL:1000507;2.54e-08;10!CL:1000494;2.54e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.49e-13,253;CL:1000497,6.83e-09,17;CL:0002518,6.83e-09,17;CL:1000507,1.59e-08,10;CL:1000494,1.59e-08,10;CL:0000244,1.84e-08,4;CL:0000731,1.84e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.77e-08;10!UBERON:0007687;4.77e-08;10 | |||
|ontology_enrichment_disease=DOID:305!1.59e-14!106;DOID:0050687!2.55e-13!143;DOID:14566!1.00e-10!239;DOID:162!1.98e-09!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.18e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.46e-17,106;DOID:0050687,3.61e-15,143;DOID:1749,9.70e-10,14;DOID:14566,6.13e-08,239;DOID:162,6.54e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0001008!3.11e-23!45;UBERON:0006554!9.33e-23!44;UBERON:0003064!2.83e-14!37;UBERON:0001046!3.52e-11!19;UBERON:0000162!7.33e-11!14;UBERON:0001353!7.33e-11!14;UBERON:0000163!7.33e-11!14;UBERON:0006866!7.33e-11!14;UBERON:0000164!7.33e-11!14;UBERON:0000931!7.33e-11!14;UBERON:0002113!9.74e-11!27;UBERON:0003918!9.74e-11!27;UBERON:0005095!9.74e-11!27;UBERON:0007687!9.74e-11!27;UBERON:0000489!5.17e-10!32;UBERON:0004122!8.17e-10!15;UBERON:0002367!3.05e-09!11;UBERON:0010147!3.05e-09!11;UBERON:0009846!3.05e-09!11;UBERON:0003353!3.05e-09!11;UBERON:0004902!3.05e-09!11;UBERON:0003820!3.05e-09!11;UBERON:0009847!3.05e-09!11;UBERON:0003937!3.60e-08!12;UBERON:0005399!3.60e-08!12;UBERON:0006555!1.06e-07!17;UBERON:0005103!1.06e-07!17;UBERON:0000083!1.06e-07!17;UBERON:0009201!1.06e-07!17;UBERON:0004819!1.06e-07!17;UBERON:0006553!1.06e-07!17;UBERON:0003074!1.06e-07!17;UBERON:0003060!1.06e-07!17;UBERON:0009773!1.13e-07!12;UBERON:0001231!1.13e-07!12;UBERON:0004810!1.13e-07!12;UBERON:0005156!1.28e-07!59;UBERON:0000990!1.28e-07!59;UBERON:0003104!4.78e-07!238;UBERON:0009142!4.78e-07!238;UBERON:0000080!4.94e-07!18;UBERON:0002120!4.94e-07!18;UBERON:0004875!4.94e-07!18;UBERON:0005721!4.94e-07!18;UBERON:0005754!4.94e-07!18;UBERON:0007297!4.94e-07!18;UBERON:0004211!5.43e-07!16;UBERON:0001285!5.43e-07!16;UBERON:0007684!5.43e-07!16;UBERON:0003220!5.43e-07!16;UBERON:0004208!5.43e-07!16;UBERON:0004876!8.21e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.14e-19;30!UBERON:0001008;1.14e-19;30!UBERON:0002113;2.04e-13;24!UBERON:0011143;2.04e-13;24!UBERON:0000489;3.88e-12;29!UBERON:0000365;3.11e-10;5!UBERON:0002367;4.11e-09;11!UBERON:0010147;4.11e-09;11!UBERON:0005910;2.02e-08;6!UBERON:0004211;2.54e-08;10!UBERON:0009773;2.54e-08;10!UBERON:0001231;2.54e-08;10!UBERON:0004810;2.54e-08;10!UBERON:0003343;2.90e-08;4!UBERON:0004785;2.90e-08;4!UBERON:0003937;3.19e-08;12!UBERON:0005399;3.19e-08;12!UBERON:0011135;4.48e-08;5!UBERON:0002216;4.48e-08;5!UBERON:0011134;4.48e-08;5!UBERON:0002209;4.48e-08;5!UBERON:0002213;4.48e-08;5!UBERON:0007844;4.48e-08;5!UBERON:0011138;4.48e-08;5!UBERON:0001130;4.48e-08;5!UBERON:0001066;4.48e-08;5!UBERON:0001468;4.48e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,6.87e-25,47;UBERON:0001008,3.52e-24,48;UBERON:0002113,3.57e-14,26;UBERON:0003918,3.57e-14,26;UBERON:0011143,3.57e-14,26;UBERON:0005095,3.57e-14,26;UBERON:0007687,3.57e-14,26;UBERON:0000489,6.40e-13,31;UBERON:0000365,3.36e-10,5;UBERON:0002367,5.14e-09,11;UBERON:0010147,5.14e-09,11;UBERON:0009846,5.14e-09,11;UBERON:0003353,5.14e-09,11;UBERON:0004902,5.14e-09,11;UBERON:0003820,5.14e-09,11;UBERON:0009847,5.14e-09,11;UBERON:0000162,9.46e-09,14;UBERON:0001353,9.46e-09,14;UBERON:0000163,9.46e-09,14;UBERON:0006866,9.46e-09,14;UBERON:0000164,9.46e-09,14;UBERON:0000931,9.46e-09,14;UBERON:0003104,1.19e-08,160;UBERON:0009142,1.19e-08,160;UBERON:0004810,1.59e-08,10;UBERON:0005910,2.16e-08,6;UBERON:0005153,3.24e-08,37;UBERON:0003343,3.72e-08,4;UBERON:0004785,3.72e-08,4;UBERON:0003937,3.90e-08,12;UBERON:0005399,3.90e-08,12;UBERON:0004122,4.86e-08,15;UBERON:0011135,5.82e-08,5;UBERON:0002216,5.82e-08,5;UBERON:0011134,5.82e-08,5;UBERON:0002209,5.82e-08,5;UBERON:0002213,5.82e-08,5;UBERON:0005856,5.82e-08,5;UBERON:0005866,5.82e-08,5;UBERON:0005863,5.82e-08,5;UBERON:0007844,5.82e-08,5;UBERON:0011138,5.82e-08,5;UBERON:0001130,5.82e-08,5;UBERON:0001066,5.82e-08,5;UBERON:0001468,5.82e-08,5;UBERON:0006555,8.57e-08,16;UBERON:0004819,8.57e-08,16;UBERON:0003064,8.93e-08,28;UBERON:0005911,8.95e-08,82;UBERON:0005172,2.49e-07,54;UBERON:0005173,2.49e-07,54 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,1.23766352960047,3.64537113300707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0.795285947051099,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,2.43042584364528,0.446498641420399,0.44905874525234,0.563057402416611,1.53316637465883,0.949265659568129,0.549605231791222,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0,0,0,0,0,0,3.64064544775211,1.43723628363248,0,0,0,0,0,0,0,0.538168907066586,0.640672166455702,0.211931901159562,0.300091096084402,0.515262646192195,0.257640540045629,0.18611685633159,0.675105328965065,1.65642908774038,0.757301322732344,0.644349290496095,0,2.13005755509969,1.10827308050404,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30137480043828,1.34867752062481,0.964044119533928,1.7647035637183,1.96091499683166,0.237270619111097,0.943819157121151,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,3.68965315629341,0,0,0,7.53967293087231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73174545298229,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,1.32969058292435,0,2.05765899409714,0,2.93064396917709,0,1.08524321078289,0.823240336780769,0,0,2.37585561880029,0,1.74306691720059,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,1.00034104211935,1.62759014219841,0,0,0,0,2.10662269809403,2.27407504055985,0,2.65690239414175,1.84369168541703,0.868836144680828,0,0,0,0,0,0,0,0,0.992431231275107,0.460385919864187,0.280660094433074,0,0,0,1.48418066444991,0.308419387605311,1.24293207719189,0.657017248110473,0,0.697262270759755,3.50492403815704,2.40607764363942,6.44566922551274,1.83703117063371,0.728364672026868,1.04899531967539,0.451199612907412,0.308061348417659,3.92174884588428,2.92278449306521,0.527758144464379,0,0.340187410553031,0.215915916102139,1.54227252690289,2.98041081298238,4.01351819083883,5.3524017339458,4.15538004464362,1.79099803777743,0,0,0,0,0,0.309123034943167,0.457847324091717,0.082509499920588,1.72279661398852,1.30012049207304,0,0.48335359146061,0.308097234229289,0.15350367472613,0,0.859361958946189,1.0151168573996,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43897966066652,0.54907405947211,1.06031162111118,0,0,0,0,0,0,0.9554993798559,1.27264888758341,0,0,0,0,0,0,1.21746226177622,0.92947049429925,0.563391205064483,1.14729081763241,0.785992328104969,0.7133421029625,1.06428319221179,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,5.16606447205476,3.36942951335251,11.0857538384169,4.36474460393223,0,0,0,0,0,0,0,0,3.84566656058903,0,1.71528151186722,0,0,0,0,0.399158742865633,0.383010740264733,0,0,0.280797178113459,0,0,0,1.52362600021443,0,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0.834245708559542,0,0.556812347790485,0,0,0,0,8.42132431836989,0,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0,0.828851746593443,0.755798243562828,0,0,0,0,1.25314822272926,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,2.12748913591143,0,0,0.520874984799877,0,0,0,0,0,0,0.435753854075961,9.75966209950223,0.846452843541768,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.915975934018623,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,6.52931232636591,0.282706142867882,0.216388639742091,0.995261931078505,0.530745387020035,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65355761355942,2.28114021073944,0,0,0,0,11.9536009332513,0,12.4963011601294,11.2691257026534,5.31061160140456,2.27144668714639,2.57979048707425,0.483781656445426,1.16942907337897,0.903270027585302,0,0,0,0.137041924646751,0,0,1.95551382734803,2.64524106830061,0,0,6.91634002339709,0,0.857974989309823,0,0,13.1988659385405,11.28004910411,13.0753557890416,0,0,0,0,0,0,0,0,0,0,2.59582700648688,0,0,0,0,17.4743924291181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27998238904628,3.77673034571986,0,1.25501137532991,8.63618387937504,0,0,0,1.08599920350743,0.864221491201268,0.326587360109409,0,0.492555124496034,2.3854323049959,0,0,0,0,0,0,1.40963004463334,0,0,0,0,0,0,3.19170628885091,0,0,0,0.327872630709804,1.09937867375164,0,0,0,0,0,0,0,0.499921631848426,0,0,0,1.40500471742064,0.144921028610825,0.597019211547496,0.701139929541673,0.554805861502613,0,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0.686791410365586,1.6837474438296,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0.308801447160972,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853533837553127,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33702242903487,4.24691004051865,2.01771458373847,11.6680922811842,1.90691047733584,0,0.397832444232549,0,0.20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| ||
|short_description=p1@ENST00000523790 | |||
}} | }} |
Latest revision as of 09:04, 31 July 2015
Short description: | p1@ENST00000523790 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000523790_5end |
Coexpression cluster: | NA |
Association with transcript: | 173bp_to_ENST00000523790_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.49e-13 | 253 |
kidney cell | 6.83e-09 | 17 |
kidney epithelial cell | 6.83e-09 | 17 |
kidney tubule cell | 1.59e-08 | 10 |
nephron tubule epithelial cell | 1.59e-08 | 10 |
transitional epithelial cell | 1.84e-08 | 4 |
urothelial cell | 1.84e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.46e-17 | 106 |
cell type cancer | 3.61e-15 | 143 |
squamous cell carcinoma | 9.70e-10 | 14 |
disease of cellular proliferation | 6.13e-08 | 239 |
cancer | 6.54e-08 | 235 |