FFCP PHASE1:Hg19::chr7:45953320..45953329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:45953320..45953329,+ | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr7:45953320..45953329,+ | |description=CAGE_peak_at_chr7:45953320..45953329,+ | ||
|id=chr7:45953320..45953329,+ | |id=chr7:45953320..45953329,+ | ||
|ontology_enrichment_celltype=CL:0000135!1.55e-08!3;CL:0000386!1.55e-08!3;CL:0000388!1.55e-08!3;CL:0000667!8.61e-08!6;CL:0000058!8.61e-08!6;CL:0000138!8.61e-08!6;CL:0000153!1.15e-07!9;CL:0000447!1.15e-07!9 | |ontology_enrichment_celltype=CL:0000135!1.55e-08!3;CL:0000386!1.55e-08!3;CL:0000388!1.55e-08!3;CL:0000667!8.61e-08!6;CL:0000058!8.61e-08!6;CL:0000138!8.61e-08!6;CL:0000153!1.15e-07!9;CL:0000447!1.15e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000153;9.87e-40;9!CL:0000447;9.87e-40;9!CL:0000138;1.24e-38;6!CL:0000327;5.57e-34;15!CL:0000499;1.86e-24;28!CL:0002591;1.92e-15;1!CL:0000151;2.03e-12;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,6.12e-40,9;CL:0000447,6.12e-40,9;CL:0000058,9.74e-39,6;CL:0000138,9.74e-39,6;CL:0000327,3.63e-34,15;CL:0000499,1.40e-24,28;CL:0002591,3.17e-15,1;CL:0000151,3.88e-14,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4235;1.92e-15;1!DOID:3571;1.92e-15;1!DOID:3350;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.54e-15,1;DOID:4235,2.38e-15,1;DOID:3350,2.00e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000043!1.55e-08!3 | |ontology_enrichment_uberon=UBERON:0000043!1.55e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.23e-08;2!UBERON:0002012;2.23e-08;2!UBERON:0008886;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.87e-08,2;UBERON:0007497,2.87e-08,2;UBERON:0003643,2.87e-08,2;UBERON:0003504,2.87e-08,2;UBERON:0003469,2.87e-08,2;UBERON:0003496,2.87e-08,2;UBERON:0002012,2.87e-08,2;UBERON:0008886,2.87e-08,2;UBERON:0007303,2.87e-08,2;UBERON:0002061,2.87e-08,2;UBERON:0005432,2.87e-08,2;UBERON:0004363,2.87e-08,2 | |||
|phase1_expression=0.726713517082227,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,6.51739283826656,13.4707262633566,0,4.37971383272372,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.600182192168805,0,0,0.37223371266318,0.168776332241266,0,0.504867548488229,0.368199594569197,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,1.99031692572366,0,0,0,0,0,0,0,0,0,0,1.89996871767898,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,1.18785872333055,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0.453411851024545,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0.863710364874486,3.34426181520935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0.179650404213174,0,0,0,0,0,0 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|phase1_expression=0.726713517082227,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,6.51739283826656,13.4707262633566,0,4.37971383272372,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.600182192168805,0,0,0.37223371266318,0.168776332241266,0,0.504867548488229,0.368199594569197,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,1.99031692572366,0,0,0,0,0,0,0,0,0,0,1.89996871767898,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,1.18785872333055,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0.453411851024545,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0.863710364874486,3.34426181520935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr7:45953320..45953329,+ | |short_description=p@chr7:45953320..45953329,+ | ||
}} | }} |
Latest revision as of 10:25, 31 July 2015
Short description: | p@chr7:45953320..45953329, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:45953320..45953329, + |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 6.12e-40 | 9 |
carbohydrate secreting cell | 6.12e-40 | 9 |
chondroblast | 9.74e-39 | 6 |
chondrocyte | 9.74e-39 | 6 |
extracellular matrix secreting cell | 3.63e-34 | 15 |
stromal cell | 1.40e-24 | 28 |
smooth muscle cell of the pulmonary artery | 3.17e-15 | 1 |
secretory cell | 3.88e-14 | 36 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 2.87e-08 | 2 |
developing epithelial placode | 2.87e-08 | 2 |
respiratory system arterial blood vessel | 2.87e-08 | 2 |
respiratory system blood vessel | 2.87e-08 | 2 |
respiratory system artery | 2.87e-08 | 2 |
head blood vessel | 2.87e-08 | 2 |
pulmonary artery | 2.87e-08 | 2 |
pulmonary vascular system | 2.87e-08 | 2 |
pharyngeal vasculature | 2.87e-08 | 2 |
truncus arteriosus | 2.87e-08 | 2 |
aortic sac | 2.87e-08 | 2 |
pharyngeal arch artery | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.54e-15 | 1 |
spindle cell sarcoma | 2.38e-15 | 1 |
mesenchymal cell neoplasm | 2.00e-08 | 2 |