FFCP PHASE1:Hg19::chr7:75947305..75947322,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:75947305..75947322,- | |||
|description=CAGE_peak_at_chr7:75947305..75947322,- | |description=CAGE_peak_at_chr7:75947305..75947322,- | ||
|id=chr7:75947305..75947322,- | |id=chr7:75947305..75947322,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.04e-13;1!CL:0002575;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.25e-13,1;CL:0002575,2.25e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;8.05e-14;4!DOID:1612;8.05e-14;4!DOID:4960;1.04e-13;1!DOID:0070004;1.04e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.06e-14,4;DOID:1612,8.06e-14,4;DOID:4960,8.58e-14,1;DOID:0070004,8.58e-14,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.09e-07;2!UBERON:0005058;1.09e-07;2!UBERON:0009113;1.09e-07;2!UBERON:0000078;1.70e-07;2!UBERON:0002012;1.70e-07;2!UBERON:0008886;1.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003351,2.66e-09,6;UBERON:0000078,1.87e-07,2;UBERON:0007497,1.87e-07,2;UBERON:0003643,1.87e-07,2;UBERON:0003504,1.87e-07,2;UBERON:0003469,1.87e-07,2;UBERON:0003496,1.87e-07,2;UBERON:0002012,1.87e-07,2;UBERON:0008886,1.87e-07,2;UBERON:0007303,1.87e-07,2;UBERON:0002061,1.87e-07,2;UBERON:0005432,1.87e-07,2;UBERON:0004363,1.87e-07,2 | |||
|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0.602694528023977,0,0,0.61560529038394,1.02000345622126,0.626909442956176,0.286235987131057,0.821246550437305,0.251085279189606,0.687720651731561,0.410502947249729,0.472264687882075,0,0,0,0,0.6024118375565,0.369754010166788,0.0774672005803016,0.426507697462265,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.822405995998037,0.167186495390678,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0.541607727530031,0.896639238079726,0.260118695119756,0.328875809207352,0.552700035571697,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.511946444617674,0,0,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0.443458794925128,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0,0,0,0.760272105718513,0.488124115096339,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0.375355559615893,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0.412210116953756,0,0,0,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0.72995471815166,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0.441463099414651,0.491953754172454,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,4.74122638775565,6.00940313466411,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.576479813667846,0.6312121671319,0,0.381988425558278,1.17217447210047,0,0,0.300343057843917,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0.587403472388222,1.02943027143257,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0,0,0.812839312631559,0,0,0,0.671624264166535,0,0.261435451024901,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.636406495851874,0,0.179872457583315,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.288666338176536,0,1.08890984861323,0.847294206991012,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0,0,0.144269212976445,0.284567373393656,0,0,0,0.211673582723883,0,0,0.912938716132769,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.66866030566487,0.284136146806413,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0.398495976502139,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,1.16641845353302,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.503464760927528,0.189753732724185,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0.889563386041866,0.370691816839509,0,0.134802265961354,0,0.234264445725339,0.364909578431332,0,0,0,0,0.91821828489147,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.19351266257817,0.146178634172371,0.410577285266046,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.305994652908965,0.288950589901519,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0.338693328263138,0,0.272406812223151,0,0.550157746388935,0.415440338029185,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0,0,0,0,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0.327872630709804,0,0,0.366078794705889,0,0,0.332787154610557,0.0620964029413835,0,0.249960815924213,0.151649117541648,0,0,0,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0.71635536432595,0.308801447160972,0,0,0.38582807654183,0.168942440653073,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0.213383459388282,1.20550485762571,0,0.184105950251841,0,0,0.127894371303652,0.215649622793364,0.471797825567689,0.218419276384028,0,0.212574920101683,0.495743057036009,0,0,2.44471409503885,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.131545547125698,0.118193840883968,0.111231401892069,0,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.795803100645473,0,0,0.329821550236287,0,0,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0,0.534434810531121,0.18378979906969,0.50141507858475,0.0757786982182394,0,0,0.310298987585686,0,0,0,2.73128742901775,0.112131862580613,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0.602694528023977,0,0,0.61560529038394,1.02000345622126,0.626909442956176,0.286235987131057,0.821246550437305,0.251085279189606,0.687720651731561,0.410502947249729,0.472264687882075,0,0,0,0,0.6024118375565,0.369754010166788,0.0774672005803016,0.426507697462265,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.822405995998037,0.167186495390678,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0.541607727530031,0.896639238079726,0.260118695119756,0.328875809207352,0.552700035571697,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.511946444617674,0,0,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0.443458794925128,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0,0,0,0.760272105718513,0.488124115096339,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0.375355559615893,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0.412210116953756,0,0,0,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0.72995471815166,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0.441463099414651,0.491953754172454,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,4.74122638775565,6.00940313466411,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.576479813667846,0.6312121671319,0,0.381988425558278,1.17217447210047,0,0,0.300343057843917,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0.587403472388222,1.02943027143257,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0,0,0.812839312631559,0,0,0,0.671624264166535,0,0.261435451024901,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.636406495851874,0,0.179872457583315,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.288666338176536,0,1.08890984861323,0.847294206991012,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0,0,0.144269212976445,0.284567373393656,0,0,0,0.211673582723883,0,0,0.912938716132769,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.66866030566487,0.284136146806413,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0.398495976502139,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,1.16641845353302,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.503464760927528,0.189753732724185,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0.889563386041866,0.370691816839509,0,0.134802265961354,0,0.234264445725339,0.364909578431332,0,0,0,0,0.91821828489147,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.19351266257817,0.146178634172371,0.410577285266046,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.305994652908965,0.288950589901519,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0.338693328263138,0,0.272406812223151,0,0.550157746388935,0.415440338029185,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0,0,0,0,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0.327872630709804,0,0,0.366078794705889,0,0,0.332787154610557,0.0620964029413835,0,0.249960815924213,0.151649117541648,0,0,0,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0.71635536432595,0.308801447160972,0,0,0.38582807654183,0.168942440653073,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0.213383459388282,1.20550485762571,0,0.184105950251841,0,0,0.127894371303652,0.215649622793364,0.471797825567689,0.218419276384028,0,0.212574920101683,0.495743057036009,0,0,2.44471409503885,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.131545547125698,0.118193840883968,0.111231401892069,0,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.795803100645473,0,0,0.329821550236287,0,0,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0,0.534434810531121,0.18378979906969,0.50141507858475,0.0757786982182394,0,0,0.310298987585686,0,0,0,2.73128742901775,0.112131862580613,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:75947305..75947322,- | |short_description=p@chr7:75947305..75947322,- | ||
}} | }} |
Latest revision as of 11:42, 31 July 2015
Short description: | p@chr7:75947305..75947322, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:75947305..75947322, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.25e-13 | 1 |
central nervous system pericyte | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pharyngeal epithelium | 2.66e-09 | 6 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.87e-07 | 2 |
developing epithelial placode | 1.87e-07 | 2 |
respiratory system arterial blood vessel | 1.87e-07 | 2 |
respiratory system blood vessel | 1.87e-07 | 2 |
respiratory system artery | 1.87e-07 | 2 |
head blood vessel | 1.87e-07 | 2 |
pulmonary artery | 1.87e-07 | 2 |
pulmonary vascular system | 1.87e-07 | 2 |
pharyngeal vasculature | 1.87e-07 | 2 |
truncus arteriosus | 1.87e-07 | 2 |
aortic sac | 1.87e-07 | 2 |
pharyngeal arch artery | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.06e-14 | 4 |
breast cancer | 8.06e-14 | 4 |
bone marrow cancer | 8.58e-14 | 1 |
myeloma | 8.58e-14 | 1 |