FFCP PHASE1:Hg19::chr8:117658838..117658848,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:117658838..117658848,- | |||
|coexpression_cluster_id=C472 | |||
|description=CAGE_peak_at_chr8:117658838..117658848,- | |description=CAGE_peak_at_chr8:117658838..117658848,- | ||
|id=chr8:117658838..117658848,- | |id=chr8:117658838..117658848,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;7.62e-26;1!CL:0002372;7.62e-26;1!CL:0000056;1.80e-07;4!CL:0000737;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,4.61e-26,1;CL:0002372,4.61e-26,1;CL:0000737,1.59e-07,4;CL:0000515,1.59e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.80e-07;4 | |||
|ontology_enrichment_disease=DOID:162!1.92e-09!235;DOID:0050687!2.18e-09!143;DOID:14566!6.96e-09!239;DOID:1749!1.84e-07!14;DOID:1324!6.04e-07!15 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001876;8.82e-51;2!UBERON:0000349;1.89e-45;5!UBERON:0001871;2.47e-15;6!UBERON:0001954;8.28e-14;2!UBERON:0003022;8.28e-14;2!UBERON:0002421;8.28e-14;2!UBERON:0002600;8.28e-14;2!UBERON:0002420;3.74e-12;9!UBERON:0007245;3.74e-12;9!UBERON:0010009;3.74e-12;9!UBERON:0010011;3.74e-12;9!UBERON:0000454;3.74e-12;9!UBERON:0002619;1.69e-10;22!UBERON:0000956;2.31e-09;25!UBERON:0000203;2.31e-09;25!UBERON:0002791;2.10e-07;32!UBERON:0001869;2.10e-07;32!UBERON:0001134;4.02e-07;16!UBERON:0002036;4.02e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,8.82e-51,2;UBERON:0000349,1.89e-45,5;UBERON:0001871,2.47e-15,6;UBERON:0001954,8.28e-14,2;UBERON:0003022,8.28e-14,2;UBERON:0002421,8.28e-14,2;UBERON:0002600,8.28e-14,2;UBERON:0002420,3.74e-12,9;UBERON:0007245,3.74e-12,9;UBERON:0010009,3.74e-12,9;UBERON:0010011,3.74e-12,9;UBERON:0000454,3.74e-12,9;UBERON:0002619,1.69e-10,22;UBERON:0000956,2.31e-09,25;UBERON:0000203,2.31e-09,25;UBERON:0002791,1.66e-07,32;UBERON:0001869,1.66e-07,32;UBERON:0003528,4.12e-07,34;UBERON:0002020,4.12e-07,34;UBERON:0001893,4.12e-07,34 | |||
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| ||
|short_description=p@chr8:117658838..117658848,- | |short_description=p@chr8:117658838..117658848,- | ||
}} | }} |
Latest revision as of 14:17, 31 July 2015
Short description: | p@chr8:117658838..117658848, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:117658838..117658848, - |
Coexpression cluster: | C472_amygdala_medial_hippocampus_insula_frontal_temporal_paracentral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 4.61e-26 | 1 |
myotube | 4.61e-26 | 1 |
striated muscle cell | 1.59e-07 | 4 |
skeletal muscle myoblast | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
amygdala | 8.82e-51 | 2 |
limbic system | 1.89e-45 | 5 |
temporal lobe | 2.47e-15 | 6 |
Ammon's horn | 8.28e-14 | 2 |
lobe parts of cerebral cortex | 8.28e-14 | 2 |
hippocampal formation | 8.28e-14 | 2 |
limbic lobe | 8.28e-14 | 2 |
basal ganglion | 3.74e-12 | 9 |
nuclear complex of neuraxis | 3.74e-12 | 9 |
aggregate regional part of brain | 3.74e-12 | 9 |
collection of basal ganglia | 3.74e-12 | 9 |
cerebral subcortex | 3.74e-12 | 9 |
regional part of cerebral cortex | 1.69e-10 | 22 |
cerebral cortex | 2.31e-09 | 25 |
pallium | 2.31e-09 | 25 |
regional part of telencephalon | 1.66e-07 | 32 |
cerebral hemisphere | 1.66e-07 | 32 |
brain grey matter | 4.12e-07 | 34 |
gray matter | 4.12e-07 | 34 |
telencephalon | 4.12e-07 | 34 |