FFCP PHASE1:Hg19::chr9:123291136..123291150,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:123291136..123291150,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_at_chr9:123291136..123291150,- | |description=CAGE_peak_at_chr9:123291136..123291150,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!9.05e-23!7;CL:0000586!9.05e-23!7;CL:0002591!3.41e-11!1;CL:0002537!1.09e-08!5;CL:0000540!3.57e-07!6;CL:0000031!3.57e-07!6;CL:0000404!3.57e-07!6 | |ontology_enrichment_celltype=CL:0000039!9.05e-23!7;CL:0000586!9.05e-23!7;CL:0002591!3.41e-11!1;CL:0002537!1.09e-08!5;CL:0000540!3.57e-07!6;CL:0000031!3.57e-07!6;CL:0000404!3.57e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.17e-75;7!CL:0000586;2.17e-75;7!CL:0002591;7.06e-34;1 | |ontology_enrichment_celltype_v019=CL:0000039;2.17e-75;7!CL:0000586;2.17e-75;7!CL:0002591;7.06e-34;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.63e-75,7;CL:0000586,2.63e-75,7;CL:0002591,5.05e-34,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.61e-53;10!UBERON:0005564;4.61e-53;10 | |ontology_enrichment_development_v019=UBERON:0009117;4.61e-53;10!UBERON:0005564;4.61e-53;10 | ||
|ontology_enrichment_disease=DOID:3095!2.27e-07!22;DOID:2994!2.27e-07!22 | |ontology_enrichment_disease=DOID:3095!2.27e-07!22;DOID:2994!2.27e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.43e-24;22!DOID:2994;1.43e-24;22 | |ontology_enrichment_disease_v019=DOID:3095;1.43e-24;22!DOID:2994;1.43e-24;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.51e-24,22;DOID:2994,1.51e-24,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.84e-20!8;UBERON:0003135!1.39e-14!11;UBERON:0002171!6.14e-11!1;UBERON:0006518!6.14e-11!1;UBERON:0008949!6.14e-11!1;UBERON:0000101!6.14e-11!1;UBERON:0002167!6.14e-11!1;UBERON:0000991!1.02e-07!21;UBERON:0009196!1.02e-07!21;UBERON:0009117!1.02e-07!21;UBERON:0005564!1.02e-07!21;UBERON:0004176!2.27e-07!22;UBERON:0003101!2.27e-07!22;UBERON:0000079!2.27e-07!22;UBERON:0002048!3.79e-07!22;UBERON:0000117!3.79e-07!22;UBERON:0000171!3.79e-07!22;UBERON:0000170!3.79e-07!22;UBERON:0005597!3.79e-07!22;UBERON:0000118!3.79e-07!22 | |ontology_enrichment_uberon=UBERON:0000473!5.84e-20!8;UBERON:0003135!1.39e-14!11;UBERON:0002171!6.14e-11!1;UBERON:0006518!6.14e-11!1;UBERON:0008949!6.14e-11!1;UBERON:0000101!6.14e-11!1;UBERON:0002167!6.14e-11!1;UBERON:0000991!1.02e-07!21;UBERON:0009196!1.02e-07!21;UBERON:0009117!1.02e-07!21;UBERON:0005564!1.02e-07!21;UBERON:0004176!2.27e-07!22;UBERON:0003101!2.27e-07!22;UBERON:0000079!2.27e-07!22;UBERON:0002048!3.79e-07!22;UBERON:0000117!3.79e-07!22;UBERON:0000171!3.79e-07!22;UBERON:0000170!3.79e-07!22;UBERON:0005597!3.79e-07!22;UBERON:0000118!3.79e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.33e-66;8!UBERON:0003135;2.54e-48;11!UBERON:0000991;1.05e-25;21!UBERON:0003101;1.43e-24;22!UBERON:0000079;1.43e-24;22!UBERON:0000078;1.07e-17;2!UBERON:0002012;1.07e-17;2!UBERON:0008886;1.07e-17;2!UBERON:0000922;2.10e-12;49!UBERON:0002323;1.47e-11;45!UBERON:0003133;1.53e-09;44!UBERON:0002553;1.29e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.33e-66;8!UBERON:0003135;2.54e-48;11!UBERON:0000991;1.05e-25;21!UBERON:0003101;1.43e-24;22!UBERON:0000079;1.43e-24;22!UBERON:0000078;1.07e-17;2!UBERON:0002012;1.07e-17;2!UBERON:0008886;1.07e-17;2!UBERON:0000922;2.10e-12;49!UBERON:0002323;1.47e-11;45!UBERON:0003133;1.53e-09;44!UBERON:0002553;1.29e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.12e-66,8;UBERON:0003135,2.86e-48,11;UBERON:0000991,1.12e-25,21;UBERON:0009196,1.12e-25,21;UBERON:0009117,1.12e-25,21;UBERON:0005564,1.12e-25,21;UBERON:0004176,1.51e-24,22;UBERON:0003101,1.51e-24,22;UBERON:0000079,1.51e-24,22;UBERON:0000078,9.07e-18,2;UBERON:0007497,9.07e-18,2;UBERON:0003643,9.07e-18,2;UBERON:0003504,9.07e-18,2;UBERON:0003469,9.07e-18,2;UBERON:0003496,9.07e-18,2;UBERON:0002012,9.07e-18,2;UBERON:0008886,9.07e-18,2;UBERON:0007303,9.07e-18,2;UBERON:0002061,9.07e-18,2;UBERON:0005432,9.07e-18,2;UBERON:0004363,9.07e-18,2;UBERON:0004145,2.59e-12,3;UBERON:0002323,4.39e-12,46;UBERON:0003133,1.32e-11,48;UBERON:0004458,2.22e-11,49;UBERON:0003886,2.23e-10,54;UBERON:0005156,1.52e-09,59;UBERON:0000990,1.52e-09,59;UBERON:0002553,3.00e-09,61;UBERON:0003498,6.55e-08,5;UBERON:0005985,6.55e-08,5;UBERON:0001048,7.94e-08,160;UBERON:0010188,8.48e-07,6;UBERON:0002539,8.48e-07,6;UBERON:0003351,8.48e-07,6;UBERON:0008816,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.609385635809,1.06886962106224,15.5302380213888,8.52405633594075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.609385635809,1.06886962106224,15.5302380213888,8.52405633594075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:123291136..123291150,- | |short_description=p@chr9:123291136..123291150,- | ||
}} | }} |
Latest revision as of 22:18, 31 July 2015
Short description: | p@chr9:123291136..123291150, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:123291136..123291150, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.63e-75 | 7 |
germ cell | 2.63e-75 | 7 |
smooth muscle cell of the pulmonary artery | 5.05e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.51e-24 | 22 |
germ cell cancer | 1.51e-24 | 22 |