FFCP PHASE1:Mm9::chr10:126365524..126365539,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |MCL_coexpression_id=26 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:126365524..126365539,+ | |||
|description=CAGE_peak_at_chr10:126365524..126365539,+ | |description=CAGE_peak_at_chr10:126365524..126365539,+ | ||
|id=chr10:126365524..126365539,+ | |id=chr10:126365524..126365539,+ | ||
|ontology_enrichment_celltype=CL:0002321!2.56e-08!70;CL:0000220!2.56e-08!70;CL:0002563!4.27e-07!9;CL:0002251!4.27e-07!9 | |ontology_enrichment_celltype=CL:0002321!2.56e-08!70;CL:0000220!2.56e-08!70;CL:0002563!4.27e-07!9;CL:0002251!4.27e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.69e-17,9;CL:0002251,1.69e-17,9;CL:0000075,2.49e-17,7;CL:0002321,1.56e-15,70;CL:0000239,1.69e-15,6;CL:0000677,1.69e-15,6;CL:0000584,1.69e-15,6;CL:0000066,4.96e-15,25;CL:0002076,1.01e-12,15;CL:0000223,1.88e-11,20;CL:0000192,7.74e-09,3;CL:0000359,7.74e-09,3;CL:0002539,7.74e-09,3;CL:0000514,7.74e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!8.51e-09!13;UBERON:0000060!8.51e-09!13;UBERON:0001262!8.51e-09!13;UBERON:0004786!8.51e-09!13;UBERON:0000344!3.62e-08!15;UBERON:0000485!5.80e-08!11;UBERON:0003350!4.27e-07!9;UBERON:0004808!4.27e-07!9;UBERON:0001277!4.27e-07!9 | |ontology_enrichment_uberon=UBERON:0001242!8.51e-09!13;UBERON:0000060!8.51e-09!13;UBERON:0001262!8.51e-09!13;UBERON:0004786!8.51e-09!13;UBERON:0000344!3.62e-08!15;UBERON:0000485!5.80e-08!11;UBERON:0003350!4.27e-07!9;UBERON:0004808!4.27e-07!9;UBERON:0001277!4.27e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.01e-21,13;UBERON:0001262,2.01e-21,13;UBERON:0004786,2.01e-21,13;UBERON:0000344,2.96e-18,15;UBERON:0003350,1.69e-17,9;UBERON:0004808,1.69e-17,9;UBERON:0001277,1.69e-17,9;UBERON:0000485,1.88e-17,11;UBERON:0004923,1.52e-10,24;UBERON:0000160,3.12e-09,31;UBERON:0000055,3.89e-09,5;UBERON:0007500,3.89e-09,5;UBERON:0001981,3.89e-09,5;UBERON:0002049,3.89e-09,5;UBERON:0007798,3.89e-09,5;UBERON:0004537,3.89e-09,5;UBERON:0006965,3.89e-09,5;UBERON:0001135,7.74e-09,3;UBERON:0004237,7.74e-09,3;UBERON:0004695,7.74e-09,3;UBERON:0002111,7.74e-09,3;UBERON:0004178,7.74e-09,3;UBERON:0000331,2.00e-07,3;UBERON:0002116,2.00e-07,3;UBERON:0001204,2.00e-07,3;UBERON:0001168,2.00e-07,3 | |||
|phase1_expression=0.640595388419176,4.88565570695105,6.82498859084304,7.25914107136392,6.01074875935617,1.17515490338323,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0.159992422793407,0.22940928106717,6.89078356938024,1.7230479846363,0.646413698057667,1.52018735565099,1.00812051903972,1.33038306393183,0,0,0,1.44425809875637,0.498703936075477,2.6542016314108,0,0,0,0,0,0,3.65100772129174,5.77848507951233,5.87349606917381,1.56478268869608,0.436050312760893,0.659058548203415,1.94429899074283,0.979904951377538,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,1.49800055259202,2.30530983192933,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0,0.075726193333184,0.604572480854284,27.8269909153611,0.860423876981386,0.679971333707751,0,0,0,0,2.04516387093669,3.37721805983729,4.94675404314476,1.12674735821344,6.41632387071589,0,0,0,0,0.505524445014783,0,0,0,0.173485326766136,0.608930956624282,0.691846491768175,0.150722640552623,0,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0.969750506270444,1.86391761218122,0.292780797011547,0.209446706813455,0.510914110417183,0.239630249011841,0,0,0,0.457500602818626,0,0,0,0,0.486723789203273,0.305518091550949,0.497627882440372,0,0,0,0.919608417733892,0.180062129805349,0.60281927134286,1.02054748726992,0.512454881139399,0.562210347358373,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0.393528463494808,0.308534225774757,1.16266972375204,0.268273401399619,0.233530684734339,0.329119699826961,0,0.486412857275134,0.730999937126662,0.439100230582101,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0,0.403367049246685,0.22237804384487,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.779856348476481,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.420814919341911,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0.335012514883631,0.714130922658041,0.585400943573396,0.315270288212382,0,0,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0,0,0.321101179975584,0.117211686592203,0,0.252470927204373,0.94652465824877,0.780877488593277,1.29254038639679,0.955875191810208,1.33679204449436,1.13230612315533,0.404810701674894,1.16902343164525,1.97643888973262,0.321321316421807,0.425820255624806,0.712262414669021,0.651547837414304,0.659880491890142,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0,0,0.727067458955011,0.356497378384721,0,0,0,1.02131881726136,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.913394847343798,0,0.42366414172764,0,0.32977250588296,0.484393280087717,0.120625849856312,0.119372344003136,0,0,0.370850604021019,0,0.412773735926445,0,0,0,0,0.679913719975421,0.69975726161829,0.276399947608848,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.539457385539283,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.39061315453185,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0,0,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.70990322463735,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0.263069711437843,0,1.12228454331548,0,0.29551344712669,0,0,0,0,0,0.859484216193193,0.956441660344217,0,0.695603506861264 | |phase1_expression=0.640595388419176,4.88565570695105,6.82498859084304,7.25914107136392,6.01074875935617,1.17515490338323,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0.159992422793407,0.22940928106717,6.89078356938024,1.7230479846363,0.646413698057667,1.52018735565099,1.00812051903972,1.33038306393183,0,0,0,1.44425809875637,0.498703936075477,2.6542016314108,0,0,0,0,0,0,3.65100772129174,5.77848507951233,5.87349606917381,1.56478268869608,0.436050312760893,0.659058548203415,1.94429899074283,0.979904951377538,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,1.49800055259202,2.30530983192933,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0,0.075726193333184,0.604572480854284,27.8269909153611,0.860423876981386,0.679971333707751,0,0,0,0,2.04516387093669,3.37721805983729,4.94675404314476,1.12674735821344,6.41632387071589,0,0,0,0,0.505524445014783,0,0,0,0.173485326766136,0.608930956624282,0.691846491768175,0.150722640552623,0,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0.969750506270444,1.86391761218122,0.292780797011547,0.209446706813455,0.510914110417183,0.239630249011841,0,0,0,0.457500602818626,0,0,0,0,0.486723789203273,0.305518091550949,0.497627882440372,0,0,0,0.919608417733892,0.180062129805349,0.60281927134286,1.02054748726992,0.512454881139399,0.562210347358373,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0.393528463494808,0.308534225774757,1.16266972375204,0.268273401399619,0.233530684734339,0.329119699826961,0,0.486412857275134,0.730999937126662,0.439100230582101,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0,0.403367049246685,0.22237804384487,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.779856348476481,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.420814919341911,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0.335012514883631,0.714130922658041,0.585400943573396,0.315270288212382,0,0,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0,0,0.321101179975584,0.117211686592203,0,0.252470927204373,0.94652465824877,0.780877488593277,1.29254038639679,0.955875191810208,1.33679204449436,1.13230612315533,0.404810701674894,1.16902343164525,1.97643888973262,0.321321316421807,0.425820255624806,0.712262414669021,0.651547837414304,0.659880491890142,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0,0,0.727067458955011,0.356497378384721,0,0,0,1.02131881726136,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.913394847343798,0,0.42366414172764,0,0.32977250588296,0.484393280087717,0.120625849856312,0.119372344003136,0,0,0.370850604021019,0,0.412773735926445,0,0,0,0,0.679913719975421,0.69975726161829,0.276399947608848,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.539457385539283,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.39061315453185,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0,0,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.70990322463735,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0.263069711437843,0,1.12228454331548,0,0.29551344712669,0,0,0,0,0,0.859484216193193,0.956441660344217,0,0.695603506861264 | ||
|short_description=p@chr10:126365524..126365539,+ | |short_description=p@chr10:126365524..126365539,+ | ||
}} | }} |
Latest revision as of 00:25, 4 August 2015
Short description: | p@chr10:126365524..126365539, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126365524..126365539, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.69e-17 | 9 |
epithelial cell of alimentary canal | 1.69e-17 | 9 |
columnar/cuboidal epithelial cell | 2.49e-17 | 7 |
embryonic cell | 1.56e-15 | 70 |
brush border epithelial cell | 1.69e-15 | 6 |
gut absorptive cell | 1.69e-15 | 6 |
enterocyte | 1.69e-15 | 6 |
epithelial cell | 4.96e-15 | 25 |
endo-epithelial cell | 1.01e-12 | 15 |
endodermal cell | 1.88e-11 | 20 |
smooth muscle cell | 7.74e-09 | 3 |
vascular associated smooth muscle cell | 7.74e-09 | 3 |
aortic smooth muscle cell | 7.74e-09 | 3 |
smooth muscle myoblast | 7.74e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.01e-21 | 13 |
wall of intestine | 2.01e-21 | 13 |
gastrointestinal system mucosa | 2.01e-21 | 13 |
mucosa | 2.96e-18 | 15 |
epithelium of mucosa | 1.69e-17 | 9 |
gastrointestinal system epithelium | 1.69e-17 | 9 |
intestinal epithelium | 1.69e-17 | 9 |
simple columnar epithelium | 1.88e-17 | 11 |
organ component layer | 1.52e-10 | 24 |
intestine | 3.12e-09 | 31 |
vessel | 3.89e-09 | 5 |
epithelial tube open at both ends | 3.89e-09 | 5 |
blood vessel | 3.89e-09 | 5 |
vasculature | 3.89e-09 | 5 |
vascular system | 3.89e-09 | 5 |
blood vasculature | 3.89e-09 | 5 |
vascular cord | 3.89e-09 | 5 |
smooth muscle tissue | 7.74e-09 | 3 |
blood vessel smooth muscle | 7.74e-09 | 3 |
arterial system smooth muscle | 7.74e-09 | 3 |
artery smooth muscle tissue | 7.74e-09 | 3 |
aorta smooth muscle tissue | 7.74e-09 | 3 |
ileal mucosa | 2.00e-07 | 3 |
ileum | 2.00e-07 | 3 |
mucosa of small intestine | 2.00e-07 | 3 |
wall of small intestine | 2.00e-07 | 3 |