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FFCP PHASE1:Mm9::chr10:127325744..127325806,-: Difference between revisions

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{{FFCP|EntrezGene=54150|HGNC=|MCL_coexpression_id=8|UniProt=O88451|association_with_transcript=0bp_to_NM_001150749,NM_017473,uc007hkv.2_5end|description=CAGE_peak_1_at_Rdh7_5end|id=chr10:127325744..127325806,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,1.40e-08,25;CL:0002563,4.70e-08,9;CL:0002251,4.70e-08,9;CL:0000223,1.76e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.80e-14!22;UBERON:0007499!7.80e-14!22;UBERON:0006925!7.80e-14!22;UBERON:0009497!7.80e-14!22;UBERON:0000015!7.80e-14!22;UBERON:0002423!7.80e-14!22;UBERON:0006235!7.80e-14!22;UBERON:0008835!7.80e-14!22;UBERON:0003894!7.80e-14!22;UBERON:0004161!7.80e-14!22;UBERON:0008836!7.80e-14!22;UBERON:0009854!8.40e-13!23;UBERON:0009856!8.40e-13!23;UBERON:0001007!2.40e-11!128;UBERON:0001555!2.40e-11!128;UBERON:0007026!2.40e-11!128;UBERON:0002365!5.20e-11!25;UBERON:0002330!5.20e-11!25;UBERON:0005172!6.20e-11!49;UBERON:0005173!6.20e-11!49;UBERON:0002417!6.20e-11!49;UBERON:0000916!6.20e-11!49;UBERON:0004119!8.81e-11!130;UBERON:0000925!8.81e-11!130;UBERON:0006595!8.81e-11!130;UBERON:0005409!1.38e-10!59;UBERON:0004921!2.13e-10!126;UBERON:0004185!2.13e-10!126;UBERON:0000344!7.53e-10!15;UBERON:0000160!4.33e-09!43;UBERON:0001242!1.52e-08!13;UBERON:0000060!1.52e-08!13;UBERON:0001262!1.52e-08!13;UBERON:0004786!1.52e-08!13;UBERON:0003929!5.50e-08!55;UBERON:0004923!5.17e-07!24;UBERON:0009569!7.70e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.20e-16,22;UBERON:0007499,7.20e-16,22;UBERON:0006925,7.20e-16,22;UBERON:0009497,7.20e-16,22;UBERON:0000015,7.20e-16,22;UBERON:0002423,7.20e-16,22;UBERON:0006235,7.20e-16,22;UBERON:0008835,7.20e-16,22;UBERON:0003894,7.20e-16,22;UBERON:0004161,7.20e-16,22;UBERON:0008836,7.20e-16,22;UBERON:0009854,7.33e-15,23;UBERON:0009856,7.33e-15,23;UBERON:0000160,1.91e-13,31;UBERON:0002365,4.26e-13,25;UBERON:0002330,4.26e-13,25;UBERON:0000344,2.04e-12,15;UBERON:0001242,1.04e-10,13;UBERON:0001262,1.04e-10,13;UBERON:0004786,1.04e-10,13;UBERON:0005409,1.43e-10,47;UBERON:0001007,3.04e-10,116;UBERON:0001555,3.04e-10,116;UBERON:0007026,3.04e-10,116;UBERON:0004119,8.29e-10,118;UBERON:0000925,8.29e-10,118;UBERON:0006595,8.29e-10,118;UBERON:0004921,3.40e-09,114;UBERON:0003929,1.55e-08,55;UBERON:0003350,4.70e-08,9;UBERON:0004808,4.70e-08,9;UBERON:0001277,4.70e-08,9;UBERON:0005256,2.06e-07,45|phase1_expression=0,97.0151633237424,105.104824298983,128.84975401671,147.764240334172,24.342494427224,18.9226238882376,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,79.0362568599429,89.4696196161963,123.459872284729,117.598024951427,78.4315286976636,35.1543325994292,44.8613630972677,3.54768817048488,0,0,0,9.82095507154334,23.6053196409059,12.4543307320045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,3.76823835312181,971.418557111985,757.488065750434,1490.12051211201,1461.99693925726,1038.52632429162,318.668389278945,0,0,0,0,0,0,0,0,0,0,468.724826246741,0,3.41416919849097,0,0.608930956624282,5.30415643688935,8.74191315205211,7.05532242814229,5.52933001850572,0.247194967734374,0.433798070759735,0,0,0,0,0,0,0,60.2878650292276,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0,1.65775299619287,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0,0.146199987425332,0,0.134206418760372,0,0,99.4560536781232,79.0707194323997,0,0,0,0.605050573870028,0.22237804384487,2.47293313946327,64.5359523700536,4.77626968699632,10.304743560811,10.544693018181,14.4273424468149,64.714997423104,108.285162987222,145.572270748942,0,0,0,0.407302655690628,0.387904974335251,0.210407459670956,0.0632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,1351.8239795174,0,0.196558995113203,0.224862112384854,4.05720242777006,21.2235900582127,105.669728489289,234.760048159861,278.548319599511,604.858793253343,626.829380459266,702.602109198134,831.268361177189,843.108294587459,917.976564991625,1113.47964730665,0,0,0,0,0,0,1.90434912708811,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0.283076530788832,2.02405350837447,0,0,0,0,5.34196811001766,0.162886959353576,0,0,0,0,0,0.295301892880773,0.614870295887855,1.80899805217755,0.727067458955011,3.92147116223193,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0.119372344003136,0,65.2917074050866,0,0,0,0.185194527369712,0.753473828018764,0.136694227721025,0.686334519619568,0,0,0,18.1387417422872,0,0,0.324016022465404,0.627264888043406,4.80397640241591,19.9599232649535,64.717655832938,26.9608620243551,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,9.76532886329626,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0.419226325255965,2.5738091183002,15.3350242183115,16.2767695218726,13.7995260124481,12.6348605881899,15.4622372933046,13.5810965797975,13.9525846130125,13.3812568526177,12.6932386391905,14.7651044297753,12.1678542242098,11.3816440073586,10.714233420886,14.7198920134397,20.9150243955103,15.9728225543404,14.7830437767339,14.5346416632329,13.8340789210536,13.5383372626682,14.2683818840763,13.6796249947678,15.2100607507365,11.2228454331548,12.5753119211625,13.4951140854522,11.4584692087513,13.479505183179,10.6098636039628,0,22.6913660192046,35.0239818098726,0,5.29419405886837,2.31867835620421|short_description=p1@Rdh7}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:54150
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=uniprot:O88451
|association_with_transcript=0bp_to_NM_001150749,NM_017473,uc007hkv.2_5end
|cluster_id=chr10:127325744..127325806,-
|description=CAGE_peak_1_at_Rdh7_5end
|id=chr10:127325744..127325806,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,1.40e-08,25;CL:0002563,4.70e-08,9;CL:0002251,4.70e-08,9;CL:0000223,1.76e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!7.80e-14!22;UBERON:0007499!7.80e-14!22;UBERON:0006925!7.80e-14!22;UBERON:0009497!7.80e-14!22;UBERON:0000015!7.80e-14!22;UBERON:0002423!7.80e-14!22;UBERON:0006235!7.80e-14!22;UBERON:0008835!7.80e-14!22;UBERON:0003894!7.80e-14!22;UBERON:0004161!7.80e-14!22;UBERON:0008836!7.80e-14!22;UBERON:0009854!8.40e-13!23;UBERON:0009856!8.40e-13!23;UBERON:0001007!2.40e-11!128;UBERON:0001555!2.40e-11!128;UBERON:0007026!2.40e-11!128;UBERON:0002365!5.20e-11!25;UBERON:0002330!5.20e-11!25;UBERON:0005172!6.20e-11!49;UBERON:0005173!6.20e-11!49;UBERON:0002417!6.20e-11!49;UBERON:0000916!6.20e-11!49;UBERON:0004119!8.81e-11!130;UBERON:0000925!8.81e-11!130;UBERON:0006595!8.81e-11!130;UBERON:0005409!1.38e-10!59;UBERON:0004921!2.13e-10!126;UBERON:0004185!2.13e-10!126;UBERON:0000344!7.53e-10!15;UBERON:0000160!4.33e-09!43;UBERON:0001242!1.52e-08!13;UBERON:0000060!1.52e-08!13;UBERON:0001262!1.52e-08!13;UBERON:0004786!1.52e-08!13;UBERON:0003929!5.50e-08!55;UBERON:0004923!5.17e-07!24;UBERON:0009569!7.70e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.20e-16,22;UBERON:0007499,7.20e-16,22;UBERON:0006925,7.20e-16,22;UBERON:0009497,7.20e-16,22;UBERON:0000015,7.20e-16,22;UBERON:0002423,7.20e-16,22;UBERON:0006235,7.20e-16,22;UBERON:0008835,7.20e-16,22;UBERON:0003894,7.20e-16,22;UBERON:0004161,7.20e-16,22;UBERON:0008836,7.20e-16,22;UBERON:0009854,7.33e-15,23;UBERON:0009856,7.33e-15,23;UBERON:0000160,1.91e-13,31;UBERON:0002365,4.26e-13,25;UBERON:0002330,4.26e-13,25;UBERON:0000344,2.04e-12,15;UBERON:0001242,1.04e-10,13;UBERON:0001262,1.04e-10,13;UBERON:0004786,1.04e-10,13;UBERON:0005409,1.43e-10,47;UBERON:0001007,3.04e-10,116;UBERON:0001555,3.04e-10,116;UBERON:0007026,3.04e-10,116;UBERON:0004119,8.29e-10,118;UBERON:0000925,8.29e-10,118;UBERON:0006595,8.29e-10,118;UBERON:0004921,3.40e-09,114;UBERON:0003929,1.55e-08,55;UBERON:0003350,4.70e-08,9;UBERON:0004808,4.70e-08,9;UBERON:0001277,4.70e-08,9;UBERON:0005256,2.06e-07,45
|phase1_expression=0,97.0151633237424,105.104824298983,128.84975401671,147.764240334172,24.342494427224,18.9226238882376,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,79.0362568599429,89.4696196161963,123.459872284729,117.598024951427,78.4315286976636,35.1543325994292,44.8613630972677,3.54768817048488,0,0,0,9.82095507154334,23.6053196409059,12.4543307320045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,3.76823835312181,971.418557111985,757.488065750434,1490.12051211201,1461.99693925726,1038.52632429162,318.668389278945,0,0,0,0,0,0,0,0,0,0,468.724826246741,0,3.41416919849097,0,0.608930956624282,5.30415643688935,8.74191315205211,7.05532242814229,5.52933001850572,0.247194967734374,0.433798070759735,0,0,0,0,0,0,0,60.2878650292276,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0,1.65775299619287,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0,0.146199987425332,0,0.134206418760372,0,0,99.4560536781232,79.0707194323997,0,0,0,0.605050573870028,0.22237804384487,2.47293313946327,64.5359523700536,4.77626968699632,10.304743560811,10.544693018181,14.4273424468149,64.714997423104,108.285162987222,145.572270748942,0,0,0,0.407302655690628,0.387904974335251,0.210407459670956,0.0632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,1351.8239795174,0,0.196558995113203,0.224862112384854,4.05720242777006,21.2235900582127,105.669728489289,234.760048159861,278.548319599511,604.858793253343,626.829380459266,702.602109198134,831.268361177189,843.108294587459,917.976564991625,1113.47964730665,0,0,0,0,0,0,1.90434912708811,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0.283076530788832,2.02405350837447,0,0,0,0,5.34196811001766,0.162886959353576,0,0,0,0,0,0.295301892880773,0.614870295887855,1.80899805217755,0.727067458955011,3.92147116223193,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0,0,0,0.119372344003136,0,65.2917074050866,0,0,0,0.185194527369712,0.753473828018764,0.136694227721025,0.686334519619568,0,0,0,18.1387417422872,0,0,0.324016022465404,0.627264888043406,4.80397640241591,19.9599232649535,64.717655832938,26.9608620243551,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,9.76532886329626,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0.419226325255965,2.5738091183002,15.3350242183115,16.2767695218726,13.7995260124481,12.6348605881899,15.4622372933046,13.5810965797975,13.9525846130125,13.3812568526177,12.6932386391905,14.7651044297753,12.1678542242098,11.3816440073586,10.714233420886,14.7198920134397,20.9150243955103,15.9728225543404,14.7830437767339,14.5346416632329,13.8340789210536,13.5383372626682,14.2683818840763,13.6796249947678,15.2100607507365,11.2228454331548,12.5753119211625,13.4951140854522,11.4584692087513,13.479505183179,10.6098636039628,0,22.6913660192046,35.0239818098726,0,5.29419405886837,2.31867835620421
|short_description=p1@Rdh7
}}

Revision as of 02:00, 4 August 2015

Short description:p1@Rdh7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rdh7_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_NM_001150749, NM_017473, uc007hkv.2_5end
EntrezGene:54150
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rdh7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I597.02
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6105.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I3128.85
CD326+ enterocyte, pool2.CNhs13197.11849-124I4147.76
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.92
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D179.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D289.47
GP2+ M cell, pool1.CNhs13228.11845-124H9123.46
GP2+ M cell, pool2.CNhs13231.11846-124I1117.60
GP2+ M cell, pool3.CNhs13240.11847-124I278.43
Ileum epithelium, pool1.CNhs13199.10252-104B935.15
Ileum epithelium, pool2.CNhs13232.10253-104C144.86
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.61
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7971.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C4757.49
Mouse hepatocyte, donor3.CNhs12615.11637-122C81490.12
Mouse hepatocyte, donor6.CNhs13090.11822-124F41462.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61038.53
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7318.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6468.72
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F58.74
adrenal gland, neonate N00.CNhs11191.1311-23C17.06
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H760.29
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I399.46
intestine, adult.CNhs10496.178-9A379.07
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D164.54
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B810.30
intestine, neonate N07.CNhs11095.720-20F210.54
intestine, neonate N10.CNhs11098.755-23A514.43
intestine, neonate N20.CNhs11187.827-18D164.71
intestine, neonate N25.CNhs11121.1352-25E3108.29
intestine, neonate N30.CNhs11131.1384-42G1145.57
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B21351.82
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F521.22
liver, embryo E17.CNhs10510.481-18A3105.67
liver, embryo E18.CNhs10579.499-43G4234.76
liver, neonate N00.CNhs11117.641-24F4278.55
liver, neonate N03.CNhs11123.1345-25G2604.86
liver, neonate N06.CNhs11101.684-20A8626.83
liver, neonate N07.CNhs11103.716-20H2702.60
liver, neonate N10.CNhs11115.751-24B9831.27
liver, neonate N20.CNhs11220.823-25A3843.11
liver, neonate N25.CNhs11198.1368-26H1917.98
liver, neonate N30.CNhs11106.1382-42D11113.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I165.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B819.96
stomach, neonate N07.CNhs11210.718-18A964.72
stomach, neonate N25.CNhs11104.1355-25E426.96
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I49.77
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.95
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.53
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.48
whole body, embryo E17.5.CNhs10513.490-9F910.61
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B322.69
whole body, neonate N00.CNhs10525.657-19C235.02
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.40e-0825
intestinal epithelial cell4.70e-089
epithelial cell of alimentary canal4.70e-089
endodermal cell1.76e-0720

Uber anatomy
Ontology termp-valuen
liver7.20e-1622
epithelial sac7.20e-1622
digestive gland7.20e-1622
epithelium of foregut-midgut junction7.20e-1622
anatomical boundary7.20e-1622
hepatobiliary system7.20e-1622
foregut-midgut junction7.20e-1622
hepatic diverticulum7.20e-1622
liver primordium7.20e-1622
septum transversum7.20e-1622
liver bud7.20e-1622
digestive tract diverticulum7.33e-1523
sac7.33e-1523
intestine1.91e-1331
exocrine gland4.26e-1325
exocrine system4.26e-1325
mucosa2.04e-1215
intestinal mucosa1.04e-1013
wall of intestine1.04e-1013
gastrointestinal system mucosa1.04e-1013
gastrointestinal system1.43e-1047
digestive system3.04e-10116
digestive tract3.04e-10116
primitive gut3.04e-10116
endoderm-derived structure8.29e-10118
endoderm8.29e-10118
presumptive endoderm8.29e-10118
subdivision of digestive tract3.40e-09114
gut epithelium1.55e-0855
epithelium of mucosa4.70e-089
gastrointestinal system epithelium4.70e-089
intestinal epithelium4.70e-089
trunk mesenchyme2.06e-0745
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