FFCP PHASE1:Mm9::chr19:4097337..4097356,+: Difference between revisions
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{{FFCP|EntrezGene=52004|HGNC=|MCL_coexpression_id=3|UniProt=Q9CPY4|association_with_transcript=0bp_to_NM_026373,uc008fym.1_5end|description=CAGE_peak_1_at_Cdk2ap2_5end|id=chr19:4097337..4097356,+|ontology_enrichment_celltype=CL:0000063!3.97e-19!66;CL:0000219!1.77e-16!54;CL:0002320!1.92e-15!46;CL:0000134!1.92e-15!46;CL:0002371!7.69e-14!118;CL:0000144!1.28e-13!121;CL:0000012!1.28e-13!121;CL:0000548!3.09e-12!115;CL:0000004!3.09e-12!115;CL:0000255!3.09e-12!115;CL:0000988!9.05e-11!32;CL:0002032!9.05e-11!32;CL:0000037!9.05e-11!32;CL:0000566!9.05e-11!32;CL:0000837!9.05e-11!32;CL:0002031!5.94e-10!25;CL:0000034!3.38e-09!97;CL:0000723!4.92e-09!91;CL:0000048!4.92e-09!91;CL:0000738!4.68e-07!17;CL:0002087!4.68e-07!17;CL:0000049!8.26e-07!19|ontology_enrichment_celltype_v019_2=CL:0000219,1.77e-16,54;CL:0002320,1.92e-15,46;CL:0000134,1.92e-15,46;CL:0000988,9.05e-11,32;CL:0002032,9.05e-11,32;CL:0000037,9.05e-11,32;CL:0000837,9.05e-11,32;CL:0002031,5.94e-10,25;CL:0000034,3.38e-09,97;CL:0000723,4.92e-09,91;CL:0000048,4.92e-09,91;CL:0000738,4.68e-07,17;CL:0002087,4.68e-07,17;CL:0000049,8.26e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.92e-15!46;UBERON:0002405!1.05e-13!70;UBERON:0004119!1.98e-13!130;UBERON:0000925!1.98e-13!130;UBERON:0006595!1.98e-13!130;UBERON:0001007!4.42e-13!128;UBERON:0001555!4.42e-13!128;UBERON:0007026!4.42e-13!128;UBERON:0004921!4.18e-12!126;UBERON:0004185!4.18e-12!126;UBERON:0000490!3.89e-11!66;UBERON:0002193!6.06e-11!48;UBERON:0004923!1.23e-10!24;UBERON:0002390!1.60e-09!45;UBERON:0003061!1.60e-09!45;UBERON:0002204!2.10e-09!32;UBERON:0000344!6.45e-09!15;UBERON:0003929!1.47e-08!55;UBERON:0005409!3.24e-08!59;UBERON:0002371!4.72e-08!16;UBERON:0000160!7.21e-08!43;UBERON:0001242!1.01e-07!13;UBERON:0000060!1.01e-07!13;UBERON:0001262!1.01e-07!13;UBERON:0004786!1.01e-07!13;UBERON:0001474!3.61e-07!22;UBERON:0004765!3.61e-07!22;UBERON:0001434!3.61e-07!22;UBERON:0005911!8.80e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.92e-15,46;UBERON:0004119,1.38e-11,118;UBERON:0000925,1.38e-11,118;UBERON:0006595,1.38e-11,118;UBERON:0001007,2.89e-11,116;UBERON:0001555,2.89e-11,116;UBERON:0007026,2.89e-11,116;UBERON:0000490,3.89e-11,66;UBERON:0002193,6.06e-11,48;UBERON:0002405,6.06e-11,48;UBERON:0004923,1.23e-10,24;UBERON:0004921,2.35e-10,114;UBERON:0002390,1.60e-09,45;UBERON:0003061,1.60e-09,45;UBERON:0002204,2.10e-09,32;UBERON:0000344,6.45e-09,15;UBERON:0003929,1.47e-08,55;UBERON:0002371,4.72e-08,16;UBERON:0001242,1.01e-07,13;UBERON:0001262,1.01e-07,13;UBERON:0004786,1.01e-07,13;UBERON:0001474,3.61e-07,22;UBERON:0004765,3.61e-07,22;UBERON:0001434,3.61e-07,22;UBERON:0005409,6.57e-07,47;UBERON:0005911,8.80e-07,69|phase1_expression=23.3817316772999,181.467211972468,220.219631864535,106.467402380004,113.202434967874,137.493123695838,136.897007388978,314.157045933355,54.3444467505434,60.1545832647523,45.7151975162098,56.7180050456842,226.156164239123,275.199426815004,51.6320130814277,56.6930748691513,41.2741508095607,108.203522717876,92.9635859846909,140.04858509335,30.2754112937808,42.5958180651798,47.5383616232862,155.672627377985,169.074640146504,212.465826722557,192.981374279266,194.355051882672,117.244449804583,103.080323071812,132.151384350562,45.7222084890934,36.2888224674896,31.6963362030877,62.6808014860266,88.104362040001,68.3967343478937,634.912483827889,543.028064444041,469.600798344497,957.05263102646,884.543903021187,831.679234742366,69.1173530685919,75.9313214834164,32.854868636941,107.970005520029,50.5818362802636,79.3067119671443,51.1350634565365,40.4560758497298,63.2511283205875,84.5624334530991,186.418070496916,144.52033363126,39.8752125855718,39.8281481514872,43.8321278435826,18.2084814773638,20.6306481916093,19.6487735086916,51.5043688745081,52.4683929705572,111.137615084253,136.463558034242,141.385542874274,85.3860314977453,116.418146512431,11.8206158031665,12.8255641415106,13.8814474491912,12.5686433137674,17.8903518170807,9.30930074033651,11.2139201091337,17.4651569455904,22.0231761998777,15.5778552463929,15.8214729253931,16.0901271030836,15.186948838,10.939180781692,20.6595419261022,25.8870800614573,18.9469827243245,17.6777151284201,17.0846016958924,17.1487490159277,17.7956554332983,19.0440331469099,29.8560423362728,111.85510400758,57.117592031451,136.00520429273,75.3740644239296,57.7954684355563,42.9759925603161,34.4269251607677,46.2419088193106,56.8876714961648,34.6474812650634,15.3991772897181,5.09610479413291,0,41.1332977921307,39.7774988795905,34.88118670602,49.2132521589148,64.9934087954401,34.4385762630393,15.9606500624845,29.2286859179656,27.673859670727,31.953199797156,15.6392980490487,41.3443085474632,53.8885029660935,36.005239873058,89.3456657469373,18.2796540440572,33.126227769059,32.9715172131951,35.4144346314432,18.1524094147159,30.369772487951,72.0388895688228,34.506755857705,68.3889113332485,51.5905121916643,8.83764772488454,11.4375150704657,4.64921102817598,8.8650403298061,8.43861009190091,10.5971902725376,7.6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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:52004 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CPY4 | |||
|association_with_transcript=0bp_to_NM_026373,uc008fym.1_5end | |||
|cluster_id=chr19:4097337..4097356,+ | |||
|description=CAGE_peak_1_at_Cdk2ap2_5end | |||
|id=chr19:4097337..4097356,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.97e-19!66;CL:0000219!1.77e-16!54;CL:0002320!1.92e-15!46;CL:0000134!1.92e-15!46;CL:0002371!7.69e-14!118;CL:0000144!1.28e-13!121;CL:0000012!1.28e-13!121;CL:0000548!3.09e-12!115;CL:0000004!3.09e-12!115;CL:0000255!3.09e-12!115;CL:0000988!9.05e-11!32;CL:0002032!9.05e-11!32;CL:0000037!9.05e-11!32;CL:0000566!9.05e-11!32;CL:0000837!9.05e-11!32;CL:0002031!5.94e-10!25;CL:0000034!3.38e-09!97;CL:0000723!4.92e-09!91;CL:0000048!4.92e-09!91;CL:0000738!4.68e-07!17;CL:0002087!4.68e-07!17;CL:0000049!8.26e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.77e-16,54;CL:0002320,1.92e-15,46;CL:0000134,1.92e-15,46;CL:0000988,9.05e-11,32;CL:0002032,9.05e-11,32;CL:0000037,9.05e-11,32;CL:0000837,9.05e-11,32;CL:0002031,5.94e-10,25;CL:0000034,3.38e-09,97;CL:0000723,4.92e-09,91;CL:0000048,4.92e-09,91;CL:0000738,4.68e-07,17;CL:0002087,4.68e-07,17;CL:0000049,8.26e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.92e-15!46;UBERON:0002405!1.05e-13!70;UBERON:0004119!1.98e-13!130;UBERON:0000925!1.98e-13!130;UBERON:0006595!1.98e-13!130;UBERON:0001007!4.42e-13!128;UBERON:0001555!4.42e-13!128;UBERON:0007026!4.42e-13!128;UBERON:0004921!4.18e-12!126;UBERON:0004185!4.18e-12!126;UBERON:0000490!3.89e-11!66;UBERON:0002193!6.06e-11!48;UBERON:0004923!1.23e-10!24;UBERON:0002390!1.60e-09!45;UBERON:0003061!1.60e-09!45;UBERON:0002204!2.10e-09!32;UBERON:0000344!6.45e-09!15;UBERON:0003929!1.47e-08!55;UBERON:0005409!3.24e-08!59;UBERON:0002371!4.72e-08!16;UBERON:0000160!7.21e-08!43;UBERON:0001242!1.01e-07!13;UBERON:0000060!1.01e-07!13;UBERON:0001262!1.01e-07!13;UBERON:0004786!1.01e-07!13;UBERON:0001474!3.61e-07!22;UBERON:0004765!3.61e-07!22;UBERON:0001434!3.61e-07!22;UBERON:0005911!8.80e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.92e-15,46;UBERON:0004119,1.38e-11,118;UBERON:0000925,1.38e-11,118;UBERON:0006595,1.38e-11,118;UBERON:0001007,2.89e-11,116;UBERON:0001555,2.89e-11,116;UBERON:0007026,2.89e-11,116;UBERON:0000490,3.89e-11,66;UBERON:0002193,6.06e-11,48;UBERON:0002405,6.06e-11,48;UBERON:0004923,1.23e-10,24;UBERON:0004921,2.35e-10,114;UBERON:0002390,1.60e-09,45;UBERON:0003061,1.60e-09,45;UBERON:0002204,2.10e-09,32;UBERON:0000344,6.45e-09,15;UBERON:0003929,1.47e-08,55;UBERON:0002371,4.72e-08,16;UBERON:0001242,1.01e-07,13;UBERON:0001262,1.01e-07,13;UBERON:0004786,1.01e-07,13;UBERON:0001474,3.61e-07,22;UBERON:0004765,3.61e-07,22;UBERON:0001434,3.61e-07,22;UBERON:0005409,6.57e-07,47;UBERON:0005911,8.80e-07,69 | |||
|phase1_expression=23.3817316772999,181.467211972468,220.219631864535,106.467402380004,113.202434967874,137.493123695838,136.897007388978,314.157045933355,54.3444467505434,60.1545832647523,45.7151975162098,56.7180050456842,226.156164239123,275.199426815004,51.6320130814277,56.6930748691513,41.2741508095607,108.203522717876,92.9635859846909,140.04858509335,30.2754112937808,42.5958180651798,47.5383616232862,155.672627377985,169.074640146504,212.465826722557,192.981374279266,194.355051882672,117.244449804583,103.080323071812,132.151384350562,45.7222084890934,36.2888224674896,31.6963362030877,62.6808014860266,88.104362040001,68.3967343478937,634.912483827889,543.028064444041,469.600798344497,957.05263102646,884.543903021187,831.679234742366,69.1173530685919,75.9313214834164,32.854868636941,107.970005520029,50.5818362802636,79.3067119671443,51.1350634565365,40.4560758497298,63.2511283205875,84.5624334530991,186.418070496916,144.52033363126,39.8752125855718,39.8281481514872,43.8321278435826,18.2084814773638,20.6306481916093,19.6487735086916,51.5043688745081,52.4683929705572,111.137615084253,136.463558034242,141.385542874274,85.3860314977453,116.418146512431,11.8206158031665,12.8255641415106,13.8814474491912,12.5686433137674,17.8903518170807,9.30930074033651,11.2139201091337,17.4651569455904,22.0231761998777,15.5778552463929,15.8214729253931,16.0901271030836,15.186948838,10.939180781692,20.6595419261022,25.8870800614573,18.9469827243245,17.6777151284201,17.0846016958924,17.1487490159277,17.7956554332983,19.0440331469099,29.8560423362728,111.85510400758,57.117592031451,136.00520429273,75.3740644239296,57.7954684355563,42.9759925603161,34.4269251607677,46.2419088193106,56.8876714961648,34.6474812650634,15.3991772897181,5.09610479413291,0,41.1332977921307,39.7774988795905,34.88118670602,49.2132521589148,64.9934087954401,34.4385762630393,15.9606500624845,29.2286859179656,27.673859670727,31.953199797156,15.6392980490487,41.3443085474632,53.8885029660935,36.005239873058,89.3456657469373,18.2796540440572,33.126227769059,32.9715172131951,35.4144346314432,18.1524094147159,30.369772487951,72.0388895688228,34.506755857705,68.3889113332485,51.5905121916643,8.83764772488454,11.4375150704657,4.64921102817598,8.8650403298061,8.43861009190091,10.5971902725376,7.62533936418461,8.04530974417499,41.9251490956013,38.9193047987859,35.7751155007006,14.3132487258974,15.4034409970427,13.8647839950119,17.3310540511072,8.91278138882395,14.8611915530426,21.1765897504987,55.6212247088884,9.48499168904506,9.07709184805532,9.67731182901719,12.0557652835166,14.7365042089567,12.1888258282758,19.9608672315705,10.5488161413801,60.3903341089382,59.1900186363845,65.3576048609863,11.5990432619881,12.195355119017,15.4853372856473,10.180023630164,11.215561209602,15.7352455145126,13.7195027402741,22.2666923161684,7.00592054203017,9.70903114489535,11.984224877774,12.5656654796076,20.7603982143972,22.6136618749782,20.3993756515765,8.41159794256509,4.93942139420565,46.9194671836993,72.4594552658111,14.5036010363959,9.0572302025571,15.4640953586512,22.5885547578144,28.4643896121434,33.669935821923,74.0265336009438,29.4811128955979,45.2403375840485,26.0632978373908,44.2568477760403,48.536248067328,76.9451457553912,58.3483930635296,21.0531370057921,16.1090402779718,11.270773567308,18.7359221617689,18.4254862809244,8.83711330618014,14.987059298449,22.2891323449199,27.0037811887165,24.3092412925947,59.5869780445169,19.0203420516347,24.176756398924,28.3326261604916,34.283360514657,36.1765739628625,62.1287078346664,54.9499622531048,21.0775794807546,54.6377212244282,15.814502718009,30.5155577088173,38.380633793091,44.4538825186917,71.4001705817211,43.9023604440664,54.8716974794816,13.2643988239339,8.31121379854332,12.5611363473639,16.8976978767722,21.6083072099942,28.3271932654356,26.147908812945,17.9704064281058,17.0527811029557,24.7154891419105,55.2219370592037,52.6689194690981,53.0862044994147,79.9193804878143,74.5150786831632,40.81643466058,29.2492951083016,13.4862495589745,8.08760637486202,39.0165169996488,17.4204939771017,31.8663301610419,35.9203644752907,41.5767157624302,31.3049125317843,30.7462170233704,23.2122755246843,29.5511812222673,25.1340037803728,26.4842811224171,10.2822821254978,32.220399342277,18.5188227813945,8.30723492703238,33.6539050863972,39.8235415019888,29.6192376109077,32.3486205952284,55.449893448234,56.4026615402276,46.1152721915891,16.5394107627662,28.3556308992454,36.7192299736263,69.5280867458795,60.0886068877493,50.5364161916116,26.5542892487955,15.3051929926614,22.7671283457648,13.9319072770535,13.3005175231705,13.3776613201553,15.1385098953951,17.3545020995322,35.670099625684,48.7213762986786,45.8699067954321,19.4565778470946,8.7190790415789,19.2398230520817,25.3069369286649,27.0832484579351,50.717665573594,13.9068976507882,76.3792837166402,40.8645998567181,53.5212184098467,61.4081169835293,50.7135584845003,54.4492052231524,21.2473037492319,28.8299991786735,28.6073945775157,42.9601778106801,8.54107182669065,14.6390016331331,22.4651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| |||
|short_description=p1@Cdk2ap2 | |||
}} |
Revision as of 02:00, 4 August 2015
Short description: | p1@Cdk2ap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdk2ap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_NM_026373, uc008fym.1_5end |
EntrezGene: | 52004 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.77e-16 | 54 |
connective tissue cell | 1.92e-15 | 46 |
mesenchymal cell | 1.92e-15 | 46 |
hematopoietic cell | 9.05e-11 | 32 |
hematopoietic oligopotent progenitor cell | 9.05e-11 | 32 |
hematopoietic stem cell | 9.05e-11 | 32 |
hematopoietic multipotent progenitor cell | 9.05e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 5.94e-10 | 25 |
stem cell | 3.38e-09 | 97 |
somatic stem cell | 4.92e-09 | 91 |
multi fate stem cell | 4.92e-09 | 91 |
leukocyte | 4.68e-07 | 17 |
nongranular leukocyte | 4.68e-07 | 17 |
common myeloid progenitor | 8.26e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.92e-15 | 46 |
endoderm-derived structure | 1.38e-11 | 118 |
endoderm | 1.38e-11 | 118 |
presumptive endoderm | 1.38e-11 | 118 |
digestive system | 2.89e-11 | 116 |
digestive tract | 2.89e-11 | 116 |
primitive gut | 2.89e-11 | 116 |
unilaminar epithelium | 3.89e-11 | 66 |
hemolymphoid system | 6.06e-11 | 48 |
immune system | 6.06e-11 | 48 |
organ component layer | 1.23e-10 | 24 |
subdivision of digestive tract | 2.35e-10 | 114 |
hematopoietic system | 1.60e-09 | 45 |
blood island | 1.60e-09 | 45 |
musculoskeletal system | 2.10e-09 | 32 |
mucosa | 6.45e-09 | 15 |
gut epithelium | 1.47e-08 | 55 |
bone marrow | 4.72e-08 | 16 |
intestinal mucosa | 1.01e-07 | 13 |
wall of intestine | 1.01e-07 | 13 |
gastrointestinal system mucosa | 1.01e-07 | 13 |
bone element | 3.61e-07 | 22 |
skeletal element | 3.61e-07 | 22 |
skeletal system | 3.61e-07 | 22 |
gastrointestinal system | 6.57e-07 | 47 |
endo-epithelium | 8.80e-07 | 69 |