FFCP PHASE1:Mm9::chr7:146768691..146768707,-: Difference between revisions
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{{FFCP|EntrezGene=14912|HGNC=|MCL_coexpression_id=20|UniProt=E9Q9J2,D3Z4R4|association_with_transcript=0bp_to_ENSMUST00000039606,ENSMUST00000097974,NM_183248,NR_027857,uc012fvu.1_5end|description=CAGE_peak_1_at_Nkx6-2_5end|id=chr7:146768691..146768707,-|ontology_enrichment_celltype=CL:0000117!1.24e-07!23;CL:0000337!1.24e-07!23;CL:0002319!1.78e-07!43;CL:0000221!4.45e-07!44;CL:0000133!4.45e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.12e-10,23;CL:0000337,2.12e-10,23;CL:0002319,4.84e-08,43;CL:0000221,9.70e-08,44;CL:0000133,9.70e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.27e-18!75;UBERON:0001016!4.27e-18!75;UBERON:0001017!2.38e-17!73;UBERON:0005743!2.38e-17!73;UBERON:0001049!2.21e-14!52;UBERON:0005068!2.21e-14!52;UBERON:0006241!2.21e-14!52;UBERON:0007135!2.21e-14!52;UBERON:0000955!1.38e-13!50;UBERON:0006238!1.38e-13!50;UBERON:0007811!3.95e-13!86;UBERON:0002616!5.36e-13!49;UBERON:0004121!7.13e-12!102;UBERON:0000924!7.13e-12!102;UBERON:0006601!7.13e-12!102;UBERON:0000033!1.35e-11!63;UBERON:0002346!8.16e-11!71;UBERON:0003075!8.16e-11!71;UBERON:0007284!8.16e-11!71;UBERON:0000153!9.10e-11!94;UBERON:0002020!1.08e-10!34;UBERON:0003076!3.85e-09!12;UBERON:0003057!3.85e-09!12;UBERON:0002791!4.22e-08!29;UBERON:0003528!4.22e-08!29;UBERON:0001893!4.22e-08!29;UBERON:0003056!8.03e-08!49;UBERON:0002021!1.00e-07!10;UBERON:0000411!1.00e-07!10;UBERON:0001950!1.00e-07!10;UBERON:0003080!1.18e-07!40;UBERON:0002780!4.43e-07!39;UBERON:0001890!4.43e-07!39;UBERON:0006240!4.43e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.14e-27,73;UBERON:0001016,9.30e-26,75;UBERON:0000073,3.68e-23,54;UBERON:0001049,7.14e-21,52;UBERON:0005068,7.14e-21,52;UBERON:0006241,7.14e-21,52;UBERON:0007135,7.14e-21,52;UBERON:0004121,9.11e-19,95;UBERON:0000924,9.11e-19,95;UBERON:0006601,9.11e-19,95;UBERON:0002346,2.58e-16,64;UBERON:0003075,2.58e-16,64;UBERON:0007284,2.58e-16,64;UBERON:0000955,3.39e-16,47;UBERON:0006238,3.39e-16,47;UBERON:0002616,2.81e-15,46;UBERON:0002020,1.26e-14,34;UBERON:0010371,4.16e-13,73;UBERON:0003076,8.93e-13,12;UBERON:0003057,8.93e-13,12;UBERON:0002021,2.79e-12,10;UBERON:0000411,2.79e-12,10;UBERON:0001950,2.79e-12,10;UBERON:0011216,3.92e-11,194;UBERON:0003080,7.61e-11,40;UBERON:0003528,2.11e-10,29;UBERON:0002791,2.11e-10,29;UBERON:0001893,2.11e-10,29;UBERON:0002780,6.68e-10,39;UBERON:0001890,6.68e-10,39;UBERON:0006240,6.68e-10,39;UBERON:0003056,1.09e-08,49;UBERON:0010314,1.68e-08,92;UBERON:0002619,8.39e-08,17;UBERON:0002240,9.74e-08,6;UBERON:0005174,9.74e-08,6;UBERON:0001137,9.74e-08,6;UBERON:0002950,2.74e-07,4;UBERON:0001891,2.74e-07,4;UBERON:0009616,2.74e-07,4;UBERON:0010286,2.74e-07,4;UBERON:0000956,3.88e-07,21;UBERON:0001869,3.88e-07,21;UBERON:0000203,3.88e-07,21|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.14247797122848,0.439372365468944,0,1.25987779462826,8.62515386189829,0,0,0,0,0,0,4.65327859977075,1.5869729378161,3.80298842103708,0,0,0,0,0,6.5912024314049,11.1423308543251,0,0,0,13.4255962669788,5.07997644188711,0.61245399607477,0.479227355091182,0,6.60695285996332,20.5576614317152,25.1914714540239,1.31886287730194,0.457438218012048,0,29.314214895145,20.8222165711722,20.933359945423,1.17851434189467,1.85083185038834,2.05039390407831,0.530083353332288,0.604572480854284,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0,0,1.86391761218122,5.5628351432194,8.79676168616511,0.255457055208591,0,0,0,18.7238299256028,13.7250180845588,0.125654352112864,7.64827008846016,7.41574826257959,21.1943805450751,20.2801578834697,0.101839363850316,0,0,2.31486041475121,0.130120442962704,0.919608417733892,0.360124259610698,0.150704817835715,0,0,0,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.268412837520744,8.83217783969334,0,0,0,0.639864751605702,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,25.2064426280833,35.9839877838064,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,4.4984984299053,0,0,0,0.164970122972535,0,1.21390318077491,2.41858845571801,0.754420319023592,0.885905678642318,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,0,1.8006109403131,0.388076051348264,0,0,0,0,0,2.11204537257339,0,0,0,0,0,0,0,0.582961673259701,32.2640025498287,0,0,0,0,0,0,0,0,0,11.4560474161814,5.21954389408873,1.21991680276109,1.08005340821801,0.418176592028937,1.52853794622324,1.21377911746339,1.32245529160537,4.71160695571253,0,0,3.38215763210514,0,0,0,0.516639293910924,0.168956125490778,0,0,0.104859344425711,1.20792060413003,2.30424005006292,3.16011120628178,0.608175645870493,1.54066435747241,1.94881234466693,0.895133478337407,1.39076948346885,0.240390899039938,0.590758108698309,0.302899349844443,0.304827226619999,0.806609481094724,1.94915761479505,2.21287235772758,2.80504565235765,0,0,0,0.335769232728157,0,0.187682475451182,0,0,0,5.0827665835536,1.84130094602871,5.15605962095457,3.26521046453006,6.85082519770642,6.0431511791176,4.05013500139084,3.60256962579376,8.60970577069989,3.10656187051092,2.90604573235695,0.399024873401031,0.512200817262403,0,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.470546902076653,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421|short_description=p1@Nkx6-2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14912 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q9J2,uniprot:D3Z4R4 | |||
|association_with_transcript=0bp_to_ENSMUST00000039606,ENSMUST00000097974,NM_183248,NR_027857,uc012fvu.1_5end | |||
|cluster_id=chr7:146768691..146768707,- | |||
|description=CAGE_peak_1_at_Nkx6-2_5end | |||
|id=chr7:146768691..146768707,- | |||
|ontology_enrichment_celltype=CL:0000117!1.24e-07!23;CL:0000337!1.24e-07!23;CL:0002319!1.78e-07!43;CL:0000221!4.45e-07!44;CL:0000133!4.45e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.12e-10,23;CL:0000337,2.12e-10,23;CL:0002319,4.84e-08,43;CL:0000221,9.70e-08,44;CL:0000133,9.70e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.27e-18!75;UBERON:0001016!4.27e-18!75;UBERON:0001017!2.38e-17!73;UBERON:0005743!2.38e-17!73;UBERON:0001049!2.21e-14!52;UBERON:0005068!2.21e-14!52;UBERON:0006241!2.21e-14!52;UBERON:0007135!2.21e-14!52;UBERON:0000955!1.38e-13!50;UBERON:0006238!1.38e-13!50;UBERON:0007811!3.95e-13!86;UBERON:0002616!5.36e-13!49;UBERON:0004121!7.13e-12!102;UBERON:0000924!7.13e-12!102;UBERON:0006601!7.13e-12!102;UBERON:0000033!1.35e-11!63;UBERON:0002346!8.16e-11!71;UBERON:0003075!8.16e-11!71;UBERON:0007284!8.16e-11!71;UBERON:0000153!9.10e-11!94;UBERON:0002020!1.08e-10!34;UBERON:0003076!3.85e-09!12;UBERON:0003057!3.85e-09!12;UBERON:0002791!4.22e-08!29;UBERON:0003528!4.22e-08!29;UBERON:0001893!4.22e-08!29;UBERON:0003056!8.03e-08!49;UBERON:0002021!1.00e-07!10;UBERON:0000411!1.00e-07!10;UBERON:0001950!1.00e-07!10;UBERON:0003080!1.18e-07!40;UBERON:0002780!4.43e-07!39;UBERON:0001890!4.43e-07!39;UBERON:0006240!4.43e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.14e-27,73;UBERON:0001016,9.30e-26,75;UBERON:0000073,3.68e-23,54;UBERON:0001049,7.14e-21,52;UBERON:0005068,7.14e-21,52;UBERON:0006241,7.14e-21,52;UBERON:0007135,7.14e-21,52;UBERON:0004121,9.11e-19,95;UBERON:0000924,9.11e-19,95;UBERON:0006601,9.11e-19,95;UBERON:0002346,2.58e-16,64;UBERON:0003075,2.58e-16,64;UBERON:0007284,2.58e-16,64;UBERON:0000955,3.39e-16,47;UBERON:0006238,3.39e-16,47;UBERON:0002616,2.81e-15,46;UBERON:0002020,1.26e-14,34;UBERON:0010371,4.16e-13,73;UBERON:0003076,8.93e-13,12;UBERON:0003057,8.93e-13,12;UBERON:0002021,2.79e-12,10;UBERON:0000411,2.79e-12,10;UBERON:0001950,2.79e-12,10;UBERON:0011216,3.92e-11,194;UBERON:0003080,7.61e-11,40;UBERON:0003528,2.11e-10,29;UBERON:0002791,2.11e-10,29;UBERON:0001893,2.11e-10,29;UBERON:0002780,6.68e-10,39;UBERON:0001890,6.68e-10,39;UBERON:0006240,6.68e-10,39;UBERON:0003056,1.09e-08,49;UBERON:0010314,1.68e-08,92;UBERON:0002619,8.39e-08,17;UBERON:0002240,9.74e-08,6;UBERON:0005174,9.74e-08,6;UBERON:0001137,9.74e-08,6;UBERON:0002950,2.74e-07,4;UBERON:0001891,2.74e-07,4;UBERON:0009616,2.74e-07,4;UBERON:0010286,2.74e-07,4;UBERON:0000956,3.88e-07,21;UBERON:0001869,3.88e-07,21;UBERON:0000203,3.88e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.14247797122848,0.439372365468944,0,1.25987779462826,8.62515386189829,0,0,0,0,0,0,4.65327859977075,1.5869729378161,3.80298842103708,0,0,0,0,0,6.5912024314049,11.1423308543251,0,0,0,13.4255962669788,5.07997644188711,0.61245399607477,0.479227355091182,0,6.60695285996332,20.5576614317152,25.1914714540239,1.31886287730194,0.457438218012048,0,29.314214895145,20.8222165711722,20.933359945423,1.17851434189467,1.85083185038834,2.05039390407831,0.530083353332288,0.604572480854284,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0,0,1.86391761218122,5.5628351432194,8.79676168616511,0.255457055208591,0,0,0,18.7238299256028,13.7250180845588,0.125654352112864,7.64827008846016,7.41574826257959,21.1943805450751,20.2801578834697,0.101839363850316,0,0,2.31486041475121,0.130120442962704,0.919608417733892,0.360124259610698,0.150704817835715,0,0,0,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.268412837520744,8.83217783969334,0,0,0,0.639864751605702,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,25.2064426280833,35.9839877838064,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,4.4984984299053,0,0,0,0.164970122972535,0,1.21390318077491,2.41858845571801,0.754420319023592,0.885905678642318,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,0,1.8006109403131,0.388076051348264,0,0,0,0,0,2.11204537257339,0,0,0,0,0,0,0,0.582961673259701,32.2640025498287,0,0,0,0,0,0,0,0,0,11.4560474161814,5.21954389408873,1.21991680276109,1.08005340821801,0.418176592028937,1.52853794622324,1.21377911746339,1.32245529160537,4.71160695571253,0,0,3.38215763210514,0,0,0,0.516639293910924,0.168956125490778,0,0,0.104859344425711,1.20792060413003,2.30424005006292,3.16011120628178,0.608175645870493,1.54066435747241,1.94881234466693,0.895133478337407,1.39076948346885,0.240390899039938,0.590758108698309,0.302899349844443,0.304827226619999,0.806609481094724,1.94915761479505,2.21287235772758,2.80504565235765,0,0,0,0.335769232728157,0,0.187682475451182,0,0,0,5.0827665835536,1.84130094602871,5.15605962095457,3.26521046453006,6.85082519770642,6.0431511791176,4.05013500139084,3.60256962579376,8.60970577069989,3.10656187051092,2.90604573235695,0.399024873401031,0.512200817262403,0,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.470546902076653,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p1@Nkx6-2 | |||
}} |
Revision as of 11:04, 4 August 2015
Short description: | p1@Nkx6-2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nkx6-2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000039606, ENSMUST00000097974, NM_183248, NR_027857, uc012fvu.1_5end |
EntrezGene: | 14912 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.12e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.12e-10 | 23 |
neural cell | 4.84e-08 | 43 |
ectodermal cell | 9.70e-08 | 44 |
neurectodermal cell | 9.70e-08 | 44 |