FFCP PHASE1:Mm9::chr19:6264408..6264418,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6264408..6264418,- | |||
|description=CAGE_peak_at_chr19:6264408..6264418,- | |description=CAGE_peak_at_chr19:6264408..6264418,- | ||
|id=chr19:6264408..6264418,- | |id=chr19:6264408..6264418,- | ||
|ontology_enrichment_celltype=CL:0002563!1.18e-23!9;CL:0002251!1.18e-23!9;CL:0000239!2.19e-16!6;CL:0000677!2.19e-16!6;CL:0000212!2.19e-16!6;CL:0000584!2.19e-16!6;CL:0000075!6.27e-14!7;CL:0002076!1.89e-13!15;CL:0000066!3.62e-13!25;CL:0000223!1.25e-09!20;CL:0002250!7.74e-09!3;CL:0000473!2.77e-08!3;CL:0000627!2.77e-08!3;CL:0000682!2.77e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.98e-44,9;CL:0002251,9.98e-44,9;CL:0000239,4.43e-30,6;CL:0000677,4.43e-30,6;CL:0000584,4.43e-30,6;CL:0002076,2.28e-26,15;CL:0000075,7.15e-26,7;CL:0000066,1.81e-21,25;CL:0000223,7.77e-20,20;CL:0002250,3.97e-15,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.24e-32!15;UBERON:0000160!4.80e-32!43;UBERON:0001242!5.54e-28!13;UBERON:0000060!5.54e-28!13;UBERON:0001262!5.54e-28!13;UBERON:0004786!5.54e-28!13;UBERON:0003350!1.18e-23!9;UBERON:0004808!1.18e-23!9;UBERON:0001277!1.18e-23!9;UBERON:0005409!1.19e-23!59;UBERON:0000485!5.15e-19!11;UBERON:0004923!5.69e-19!24;UBERON:0001007!1.71e-10!128;UBERON:0001555!1.71e-10!128;UBERON:0007026!1.71e-10!128;UBERON:0004119!3.11e-10!130;UBERON:0000925!3.11e-10!130;UBERON:0006595!3.11e-10!130;UBERON:0004921!8.42e-09!126;UBERON:0004185!8.42e-09!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.98e-44,9;UBERON:0004808,9.98e-44,9;UBERON:0001277,9.98e-44,9;UBERON:0000485,7.63e-36,11;UBERON:0000344,1.33e-35,15;UBERON:0001242,2.22e-30,13;UBERON:0001262,2.22e-30,13;UBERON:0004786,2.22e-30,13;UBERON:0004923,2.52e-22,24;UBERON:0000160,7.50e-13,31;UBERON:0003199,4.30e-12,1;UBERON:0005409,1.71e-08,47;UBERON:0003929,2.97e-07,55 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,8.16653370528441,6.51164448930251,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,1.60586496747019,1.72269589234506,0.430761996159075,0.430942465371778,0.570070258369122,0,0.665191531965914,0,0,0,1.44425809875637,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0.213288250535234,0,0.644337306610467,0.201683524623343,0.22237804384487,0,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0,0.898819408654221,0.432276099749388,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,1.81999695755814,8.16653370528441,6.51164448930251,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,1.60586496747019,1.72269589234506,0.430761996159075,0.430942465371778,0.570070258369122,0,0.665191531965914,0,0,0,1.44425809875637,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0.213288250535234,0,0.644337306610467,0.201683524623343,0.22237804384487,0,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0,0.898819408654221,0.432276099749388,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:6264408..6264418,- | |short_description=p@chr19:6264408..6264418,- | ||
}} | }} |
Latest revision as of 12:12, 4 August 2015
Short description: | p@chr19:6264408..6264418, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6264408..6264418, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.98e-44 | 9 |
epithelial cell of alimentary canal | 9.98e-44 | 9 |
brush border epithelial cell | 4.43e-30 | 6 |
gut absorptive cell | 4.43e-30 | 6 |
enterocyte | 4.43e-30 | 6 |
endo-epithelial cell | 2.28e-26 | 15 |
columnar/cuboidal epithelial cell | 7.15e-26 | 7 |
epithelial cell | 1.81e-21 | 25 |
endodermal cell | 7.77e-20 | 20 |
intestinal crypt stem cell | 3.97e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 9.98e-44 | 9 |
gastrointestinal system epithelium | 9.98e-44 | 9 |
intestinal epithelium | 9.98e-44 | 9 |
simple columnar epithelium | 7.63e-36 | 11 |
mucosa | 1.33e-35 | 15 |
intestinal mucosa | 2.22e-30 | 13 |
wall of intestine | 2.22e-30 | 13 |
gastrointestinal system mucosa | 2.22e-30 | 13 |
organ component layer | 2.52e-22 | 24 |
intestine | 7.50e-13 | 31 |
egg chamber | 4.30e-12 | 1 |
gastrointestinal system | 1.71e-08 | 47 |
gut epithelium | 2.97e-07 | 55 |