FFCP PHASE1:Mm9::chr1:123242770..123242792,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3225 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:123242770..123242792,- | |||
|description=CAGE_peak_at_chr1:123242770..123242792,- | |description=CAGE_peak_at_chr1:123242770..123242792,- | ||
|id=chr1:123242770..123242792,- | |id=chr1:123242770..123242792,- | ||
|ontology_enrichment_celltype=CL:0000239!9.28e-08!6;CL:0000677!9.28e-08!6;CL:0000212!9.28e-08!6;CL:0000584!9.28e-08!6;CL:0000473!5.56e-07!3;CL:0000627!5.56e-07!3;CL:0000682!5.56e-07!3 | |ontology_enrichment_celltype=CL:0000239!9.28e-08!6;CL:0000677!9.28e-08!6;CL:0000212!9.28e-08!6;CL:0000584!9.28e-08!6;CL:0000473!5.56e-07!3;CL:0000627!5.56e-07!3;CL:0000682!5.56e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.42e-11,3;CL:0000239,1.22e-08,6;CL:0000677,1.22e-08,6;CL:0000584,1.22e-08,6;CL:0000075,2.03e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.07e-14!15;UBERON:0005409!5.16e-12!59;UBERON:0001242!2.61e-11!13;UBERON:0000060!2.61e-11!13;UBERON:0001262!2.61e-11!13;UBERON:0004786!2.61e-11!13;UBERON:0000014!1.71e-09!5;UBERON:0001003!1.71e-09!5;UBERON:0002097!1.71e-09!5;UBERON:0002199!1.71e-09!5;UBERON:0007029!1.71e-09!5;UBERON:0007376!1.71e-09!5;UBERON:0002416!1.71e-09!5;UBERON:0007383!1.71e-09!5;UBERON:0000160!2.77e-09!43;UBERON:0004923!3.52e-08!24;UBERON:0000331!1.69e-07!3;UBERON:0002116!1.69e-07!3;UBERON:0001204!1.69e-07!3;UBERON:0001168!1.69e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.95e-21,15;UBERON:0005409,1.68e-17,47;UBERON:0000160,4.34e-16,31;UBERON:0001242,8.14e-16,13;UBERON:0001262,8.14e-16,13;UBERON:0004786,8.14e-16,13;UBERON:0004923,1.01e-12,24;UBERON:0000331,8.29e-12,3;UBERON:0002116,8.29e-12,3;UBERON:0001204,8.29e-12,3;UBERON:0001168,8.29e-12,3;UBERON:0000014,2.03e-10,5;UBERON:0001003,2.03e-10,5;UBERON:0002097,2.03e-10,5;UBERON:0002199,2.03e-10,5;UBERON:0007029,2.03e-10,5;UBERON:0007376,2.03e-10,5;UBERON:0002416,2.03e-10,5;UBERON:0007383,2.03e-10,5;UBERON:0002108,5.93e-09,4;UBERON:0001962,3.86e-08,2;UBERON:0001961,3.86e-08,2;UBERON:0001744,3.86e-08,2;UBERON:0001155,5.72e-08,2;UBERON:0000059,5.72e-08,2;UBERON:0001007,6.97e-07,116;UBERON:0001555,6.97e-07,116;UBERON:0007026,6.97e-07,116 | |||
|phase1_expression=0,2.09385244583617,3.63999391511629,1.51232105653415,2.00358291978539,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,10.5528269290898,3.44539178469012,3.01533397311352,5.38678081714723,33.2540984048654,9.57714493087737,27.9380443425684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0447564995665,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8338706300765,0.793351699990633,0,0,0,0,0,0,2.37264530772256,0,0,0,0.19496408711912,0.898819408654221,2.16138049874694,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,2.42196640043858,1.56813604813205,2.74556391207214,2.1338316966858,0,0,0,0,0,0,0,0,0,0,0,10.5013767981662,0,0,0,0,0.218362563746178,0.944050424693745,1.57041565878138,4.18809507174447,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,2.09385244583617,3.63999391511629,1.51232105653415,2.00358291978539,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,10.5528269290898,3.44539178469012,3.01533397311352,5.38678081714723,33.2540984048654,9.57714493087737,27.9380443425684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0447564995665,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8338706300765,0.793351699990633,0,0,0,0,0,0,2.37264530772256,0,0,0,0.19496408711912,0.898819408654221,2.16138049874694,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,2.42196640043858,1.56813604813205,2.74556391207214,2.1338316966858,0,0,0,0,0,0,0,0,0,0,0,10.5013767981662,0,0,0,0,0.218362563746178,0.944050424693745,1.57041565878138,4.18809507174447,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr1:123242770..123242792,- | |short_description=p@chr1:123242770..123242792,- | ||
}} | }} |
Latest revision as of 16:13, 4 August 2015
Short description: | p@chr1:123242770..123242792, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:123242770..123242792, - |
Coexpression cluster: | MCL_coexpression_mm9:3225 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.42e-11 | 3 |
brush border epithelial cell | 1.22e-08 | 6 |
gut absorptive cell | 1.22e-08 | 6 |
enterocyte | 1.22e-08 | 6 |
columnar/cuboidal epithelial cell | 2.03e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.95e-21 | 15 |
gastrointestinal system | 1.68e-17 | 47 |
intestine | 4.34e-16 | 31 |
intestinal mucosa | 8.14e-16 | 13 |
wall of intestine | 8.14e-16 | 13 |
gastrointestinal system mucosa | 8.14e-16 | 13 |
organ component layer | 1.01e-12 | 24 |
ileal mucosa | 8.29e-12 | 3 |
ileum | 8.29e-12 | 3 |
mucosa of small intestine | 8.29e-12 | 3 |
wall of small intestine | 8.29e-12 | 3 |
zone of skin | 2.03e-10 | 5 |
skin epidermis | 2.03e-10 | 5 |
skin of body | 2.03e-10 | 5 |
integument | 2.03e-10 | 5 |
surface | 2.03e-10 | 5 |
outer epithelium | 2.03e-10 | 5 |
integumental system | 2.03e-10 | 5 |
enveloping layer of ectoderm | 2.03e-10 | 5 |
small intestine | 5.93e-09 | 4 |
gut-associated lymphoid tissue | 3.86e-08 | 2 |
mucosa-associated lymphoid tissue | 3.86e-08 | 2 |
lymphoid tissue | 3.86e-08 | 2 |
colon | 5.72e-08 | 2 |
large intestine | 5.72e-08 | 2 |
digestive system | 6.97e-07 | 116 |
digestive tract | 6.97e-07 | 116 |
primitive gut | 6.97e-07 | 116 |