FFCP PHASE1:Mm9::chr4:119330252..119330270,-: Difference between revisions
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|id=chr4:119330252..119330270,-
|short_description=p@chr4:119330252..119330270,-
|description=CAGE_peak_at_chr4:119330252..119330270,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1198 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:119330252..119330270,- | |||
|description=CAGE_peak_at_chr4:119330252..119330270,- | |||
|id=chr4:119330252..119330270,- | |||
|ontology_enrichment_celltype=CL:0000239!1.35e-17!6;CL:0000677!1.35e-17!6;CL:0000212!1.35e-17!6;CL:0000584!1.35e-17!6;CL:0000075!5.47e-15!7;CL:0002563!1.66e-11!9;CL:0002251!1.66e-11!9;CL:0000473!5.08e-10!3;CL:0000627!5.08e-10!3;CL:0000682!5.08e-10!3;CL:0000066!2.62e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.80e-18,6;CL:0000677,3.80e-18,6;CL:0000584,3.80e-18,6;CL:0000075,1.55e-15,7;CL:0000682,5.42e-14,3;CL:0002563,4.79e-12,9;CL:0002251,4.79e-12,9;CL:0000066,3.04e-10,25;CL:0002076,3.86e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.43e-26!15;UBERON:0000160!2.05e-22!43;UBERON:0001242!4.43e-21!13;UBERON:0000060!4.43e-21!13;UBERON:0001262!4.43e-21!13;UBERON:0004786!4.43e-21!13;UBERON:0004923!1.19e-15!24;UBERON:0005409!3.73e-15!59;UBERON:0003350!1.66e-11!9;UBERON:0004808!1.66e-11!9;UBERON:0001277!1.66e-11!9;UBERON:0000331!1.48e-09!3;UBERON:0002116!1.48e-09!3;UBERON:0001204!1.48e-09!3;UBERON:0001168!1.48e-09!3;UBERON:0000485!2.74e-09!11;UBERON:0001962!2.23e-07!2;UBERON:0001961!2.23e-07!2;UBERON:0001744!2.23e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.83e-28,31;UBERON:0000344,1.33e-27,15;UBERON:0001242,2.88e-20,13;UBERON:0001262,2.88e-20,13;UBERON:0004786,2.88e-20,13;UBERON:0005409,1.71e-17,47;UBERON:0002108,3.79e-17,4;UBERON:0004923,1.11e-16,24;UBERON:0000331,2.61e-13,3;UBERON:0002116,2.61e-13,3;UBERON:0001204,2.61e-13,3;UBERON:0001168,2.61e-13,3;UBERON:0003350,4.79e-12,9;UBERON:0004808,4.79e-12,9;UBERON:0001277,4.79e-12,9;UBERON:0001962,4.07e-10,2;UBERON:0001961,4.07e-10,2;UBERON:0001744,4.07e-10,2;UBERON:0000485,8.06e-10,11;UBERON:0001007,1.01e-07,116;UBERON:0001555,1.01e-07,116;UBERON:0007026,1.01e-07,116;UBERON:0004119,1.53e-07,118;UBERON:0000925,1.53e-07,118;UBERON:0006595,1.53e-07,118;UBERON:0002465,5.22e-07,3 | |||
|phase1_expression=0,5.58360652222978,8.64498554840118,3.0246421130683,4.50806156951712,0.839396359559449,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91971964335605,5.73523202667925,4.59385571292016,4.30761996159075,5.817723282519,3.99049180858385,2.77233142735924,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.58670339998127,0,0,0,0,0,0,1.42358718463353,1.97638745668813,0.754005626400808,0.198956472041151,0.974820435595601,0,1.51296634912286,1.1948476395262,0,0,0,0,0,0,0,0,0.627994911365499,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8885031833875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.58360652222978,8.64498554840118,3.0246421130683,4.50806156951712,0.839396359559449,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91971964335605,5.73523202667925,4.59385571292016,4.30761996159075,5.817723282519,3.99049180858385,2.77233142735924,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.58670339998127,0,0,0,0,0,0,1.42358718463353,1.97638745668813,0.754005626400808,0.198956472041151,0.974820435595601,0,1.51296634912286,1.1948476395262,0,0,0,0,0,0,0,0,0.627994911365499,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8885031833875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:119330252..119330270,- | |||
}} | }} |
Latest revision as of 16:17, 4 August 2015
Short description: | p@chr4:119330252..119330270, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:119330252..119330270, - |
Coexpression cluster: | MCL_coexpression_mm9:1198 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.80e-18 | 6 |
gut absorptive cell | 3.80e-18 | 6 |
enterocyte | 3.80e-18 | 6 |
columnar/cuboidal epithelial cell | 1.55e-15 | 7 |
M cell of gut | 5.42e-14 | 3 |
intestinal epithelial cell | 4.79e-12 | 9 |
epithelial cell of alimentary canal | 4.79e-12 | 9 |
epithelial cell | 3.04e-10 | 25 |
endo-epithelial cell | 3.86e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.83e-28 | 31 |
mucosa | 1.33e-27 | 15 |
intestinal mucosa | 2.88e-20 | 13 |
wall of intestine | 2.88e-20 | 13 |
gastrointestinal system mucosa | 2.88e-20 | 13 |
gastrointestinal system | 1.71e-17 | 47 |
small intestine | 3.79e-17 | 4 |
organ component layer | 1.11e-16 | 24 |
ileal mucosa | 2.61e-13 | 3 |
ileum | 2.61e-13 | 3 |
mucosa of small intestine | 2.61e-13 | 3 |
wall of small intestine | 2.61e-13 | 3 |
epithelium of mucosa | 4.79e-12 | 9 |
gastrointestinal system epithelium | 4.79e-12 | 9 |
intestinal epithelium | 4.79e-12 | 9 |
gut-associated lymphoid tissue | 4.07e-10 | 2 |
mucosa-associated lymphoid tissue | 4.07e-10 | 2 |
lymphoid tissue | 4.07e-10 | 2 |
simple columnar epithelium | 8.06e-10 | 11 |
digestive system | 1.01e-07 | 116 |
digestive tract | 1.01e-07 | 116 |
primitive gut | 1.01e-07 | 116 |
endoderm-derived structure | 1.53e-07 | 118 |
endoderm | 1.53e-07 | 118 |
presumptive endoderm | 1.53e-07 | 118 |
lymphoid system | 5.22e-07 | 3 |