FFCP PHASE1:Mm9::chr1:132660649..132660660,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=254 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:132660649..132660660,- | |||
|description=CAGE_peak_at_chr1:132660649..132660660,- | |description=CAGE_peak_at_chr1:132660649..132660660,- | ||
|id=chr1:132660649..132660660,- | |id=chr1:132660649..132660660,- | ||
|ontology_enrichment_celltype=CL:0000223!2.70e-21!20;CL:0000066!8.33e-21!25;CL:0002563!3.79e-16!9;CL:0002251!3.79e-16!9;CL:0002076!3.17e-13!15;CL:0000239!4.87e-11!6;CL:0000677!4.87e-11!6;CL:0000212!4.87e-11!6;CL:0000584!4.87e-11!6;CL:0000181!4.32e-10!5;CL:0000417!4.32e-10!5;CL:0000668!4.32e-10!5;CL:0000412!4.32e-10!5;CL:0000182!4.32e-10!5;CL:0000075!2.49e-09!7 | |ontology_enrichment_celltype=CL:0000223!2.70e-21!20;CL:0000066!8.33e-21!25;CL:0002563!3.79e-16!9;CL:0002251!3.79e-16!9;CL:0002076!3.17e-13!15;CL:0000239!4.87e-11!6;CL:0000677!4.87e-11!6;CL:0000212!4.87e-11!6;CL:0000584!4.87e-11!6;CL:0000181!4.32e-10!5;CL:0000417!4.32e-10!5;CL:0000668!4.32e-10!5;CL:0000412!4.32e-10!5;CL:0000182!4.32e-10!5;CL:0000075!2.49e-09!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.73e-21,25;CL:0000223,8.25e-21,20;CL:0002563,2.07e-18,9;CL:0002251,2.07e-18,9;CL:0000182,5.54e-13,5;CL:0002076,4.59e-11,15;CL:0000239,1.88e-10,6;CL:0000677,1.88e-10,6;CL:0000584,1.88e-10,6;CL:0002250,6.17e-10,3;CL:0000075,4.84e-09,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!3.79e-16!9;UBERON:0004808!3.79e-16!9;UBERON:0001277!3.79e-16!9;UBERON:0000344!3.45e-13!15;UBERON:0001242!5.11e-13!13;UBERON:0000060!5.11e-13!13;UBERON:0001262!5.11e-13!13;UBERON:0004786!5.11e-13!13;UBERON:0000485!7.82e-13!11;UBERON:0005911!1.41e-11!69;UBERON:0001007!1.47e-10!128;UBERON:0001555!1.47e-10!128;UBERON:0007026!1.47e-10!128;UBERON:0004119!2.95e-10!130;UBERON:0000925!2.95e-10!130;UBERON:0006595!2.95e-10!130;UBERON:0004921!4.96e-10!126;UBERON:0004185!4.96e-10!126;UBERON:0003929!4.60e-09!55;UBERON:0004923!9.31e-09!24 | |ontology_enrichment_uberon=UBERON:0003350!3.79e-16!9;UBERON:0004808!3.79e-16!9;UBERON:0001277!3.79e-16!9;UBERON:0000344!3.45e-13!15;UBERON:0001242!5.11e-13!13;UBERON:0000060!5.11e-13!13;UBERON:0001262!5.11e-13!13;UBERON:0004786!5.11e-13!13;UBERON:0000485!7.82e-13!11;UBERON:0005911!1.41e-11!69;UBERON:0001007!1.47e-10!128;UBERON:0001555!1.47e-10!128;UBERON:0007026!1.47e-10!128;UBERON:0004119!2.95e-10!130;UBERON:0000925!2.95e-10!130;UBERON:0006595!2.95e-10!130;UBERON:0004921!4.96e-10!126;UBERON:0004185!4.96e-10!126;UBERON:0003929!4.60e-09!55;UBERON:0004923!9.31e-09!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.07e-18,9;UBERON:0004808,2.07e-18,9;UBERON:0001277,2.07e-18,9;UBERON:0000485,4.45e-15,11;UBERON:0003929,6.76e-14,55;UBERON:0001242,9.15e-13,13;UBERON:0001262,9.15e-13,13;UBERON:0004786,9.15e-13,13;UBERON:0000490,2.14e-11,66;UBERON:0000344,4.59e-11,15;UBERON:0005911,7.49e-11,69;UBERON:0002367,2.16e-08,1;UBERON:0009846,2.16e-08,1;UBERON:0003353,2.16e-08,1;UBERON:0004902,2.16e-08,1;UBERON:0003820,2.16e-08,1;UBERON:0009847,2.16e-08,1;UBERON:0002107,7.70e-08,22;UBERON:0007499,7.70e-08,22;UBERON:0006925,7.70e-08,22;UBERON:0009497,7.70e-08,22;UBERON:0000015,7.70e-08,22;UBERON:0002423,7.70e-08,22;UBERON:0006235,7.70e-08,22;UBERON:0008835,7.70e-08,22;UBERON:0003894,7.70e-08,22;UBERON:0004161,7.70e-08,22;UBERON:0008836,7.70e-08,22;UBERON:0009854,1.70e-07,23;UBERON:0009856,1.70e-07,23;UBERON:0004923,6.71e-07,24;UBERON:0002365,6.90e-07,25;UBERON:0002330,6.90e-07,25 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,2.11724947914781,1.00179145989269,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,1.72269589234506,0,0.215471232685889,0,0,0.443461021310609,0,0,0,1.1554064790051,0.498703936075477,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,6.11974200336975,2.15881276655127,1.29955283489534,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,3.31133251185274,0,0.148442139064825,0,0,0,0,0.352766121407114,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0.287696137450811,9.07957269940198,0,0,0,0,0,0,1.92977408545347,0.184753190166605,0,0,0,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19003956304428,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.836353184057875,0,0,0.165306911450672,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,1.04692622291808,0.454999239389536,2.11724947914781,1.00179145989269,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,1.72269589234506,0,0.215471232685889,0,0,0.443461021310609,0,0,0,1.1554064790051,0.498703936075477,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,6.11974200336975,2.15881276655127,1.29955283489534,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,3.31133251185274,0,0.148442139064825,0,0,0,0,0.352766121407114,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0.287696137450811,9.07957269940198,0,0,0,0,0,0,1.92977408545347,0.184753190166605,0,0,0,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19003956304428,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.836353184057875,0,0,0.165306911450672,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr1:132660649..132660660,- | |short_description=p@chr1:132660649..132660660,- | ||
}} | }} |
Latest revision as of 17:48, 4 August 2015
Short description: | p@chr1:132660649..132660660, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132660649..132660660, - |
Coexpression cluster: | MCL_coexpression_mm9:254 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.73e-21 | 25 |
endodermal cell | 8.25e-21 | 20 |
intestinal epithelial cell | 2.07e-18 | 9 |
epithelial cell of alimentary canal | 2.07e-18 | 9 |
hepatocyte | 5.54e-13 | 5 |
endo-epithelial cell | 4.59e-11 | 15 |
brush border epithelial cell | 1.88e-10 | 6 |
gut absorptive cell | 1.88e-10 | 6 |
enterocyte | 1.88e-10 | 6 |
intestinal crypt stem cell | 6.17e-10 | 3 |
columnar/cuboidal epithelial cell | 4.84e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.07e-18 | 9 |
gastrointestinal system epithelium | 2.07e-18 | 9 |
intestinal epithelium | 2.07e-18 | 9 |
simple columnar epithelium | 4.45e-15 | 11 |
gut epithelium | 6.76e-14 | 55 |
intestinal mucosa | 9.15e-13 | 13 |
wall of intestine | 9.15e-13 | 13 |
gastrointestinal system mucosa | 9.15e-13 | 13 |
unilaminar epithelium | 2.14e-11 | 66 |
mucosa | 4.59e-11 | 15 |
endo-epithelium | 7.49e-11 | 69 |
prostate gland | 2.16e-08 | 1 |
embryonic cloacal epithelium | 2.16e-08 | 1 |
epithelium of hindgut | 2.16e-08 | 1 |
urogenital sinus epithelium | 2.16e-08 | 1 |
prostate bud | 2.16e-08 | 1 |
prostate field | 2.16e-08 | 1 |
liver | 7.70e-08 | 22 |
epithelial sac | 7.70e-08 | 22 |
digestive gland | 7.70e-08 | 22 |
epithelium of foregut-midgut junction | 7.70e-08 | 22 |
anatomical boundary | 7.70e-08 | 22 |
hepatobiliary system | 7.70e-08 | 22 |
foregut-midgut junction | 7.70e-08 | 22 |
hepatic diverticulum | 7.70e-08 | 22 |
liver primordium | 7.70e-08 | 22 |
septum transversum | 7.70e-08 | 22 |
liver bud | 7.70e-08 | 22 |
digestive tract diverticulum | 1.70e-07 | 23 |
sac | 1.70e-07 | 23 |
organ component layer | 6.71e-07 | 24 |
exocrine gland | 6.90e-07 | 25 |
exocrine system | 6.90e-07 | 25 |