FFCP PHASE1:Mm9::chr1:135937315..135937331,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1423 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135937315..135937331,+ | |||
|description=CAGE_peak_at_chr1:135937315..135937331,+ | |description=CAGE_peak_at_chr1:135937315..135937331,+ | ||
|id=chr1:135937315..135937331,+ | |id=chr1:135937315..135937331,+ | ||
|ontology_enrichment_celltype=CL:0002453!5.11e-07!8 | |ontology_enrichment_celltype=CL:0002453!5.11e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.99e-12,2;CL:0002604,2.99e-12,2;CL:0000192,5.43e-08,3;CL:0000359,5.43e-08,3;CL:0002539,5.43e-08,3;CL:0000514,5.43e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000026!1.02e-07!13;UBERON:0004708!1.02e-07!13;UBERON:0002101!1.02e-07!13;UBERON:0004357!1.02e-07!13;UBERON:0009872!1.02e-07!13;UBERON:0004347!1.02e-07!13;UBERON:0005732!1.02e-07!13;UBERON:0005733!1.02e-07!13;UBERON:0003102!5.24e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,1.53e-10,12;UBERON:0004708,1.53e-10,12;UBERON:0002101,1.53e-10,12;UBERON:0004357,1.53e-10,12;UBERON:0004347,1.53e-10,12;UBERON:0005732,1.53e-10,12;UBERON:0005733,1.53e-10,12;UBERON:0005418,5.02e-10,5;UBERON:0002472,5.02e-10,5;UBERON:0008784,5.02e-10,5;UBERON:0006058,5.02e-10,5;UBERON:0004709,5.02e-10,5;UBERON:0002529,5.02e-10,5;UBERON:0010538,5.02e-10,5;UBERON:0005420,5.02e-10,5;UBERON:0010758,5.02e-10,5;UBERON:0000978,5.02e-10,5;UBERON:0002103,5.02e-10,5;UBERON:0000376,5.02e-10,5;UBERON:0000154,5.02e-10,5;UBERON:0010709,5.02e-10,5;UBERON:0005730,5.02e-10,5;UBERON:0010707,1.01e-09,13;UBERON:0001135,5.43e-08,3;UBERON:0004237,5.43e-08,3;UBERON:0004695,5.43e-08,3;UBERON:0002111,5.43e-08,3;UBERON:0004178,5.43e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14742044938943,2.12891555560981,0,0.782391344348039,0.436050312760893,5.71184075109627,8.1660557611199,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.599200221036809,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0.578397427679647,0,2.42650274921114,0.662524555381181,2.42437626567611,0,0.292780797011547,0.628340120440365,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,3.23458123586242,0.252722758433675,0,0,0,0,0,0.136072998302656,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0.527853372491847,0.876782929710299,0.834141747676794,1.0447564995665,1.02891068203972,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.402619256281115,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.651859905768103,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0,0,0.275936746304732,0,0,0,1.51482556322624,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.41326727862668,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0.347652977834566,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0,0,0.385813221962283,1.24905288968973,0.233931608445408,2.36358159453128,4.97349663378993,3.75005412503176,1.85494268496337 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14742044938943,2.12891555560981,0,0.782391344348039,0.436050312760893,5.71184075109627,8.1660557611199,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.599200221036809,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0.578397427679647,0,2.42650274921114,0.662524555381181,2.42437626567611,0,0.292780797011547,0.628340120440365,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,3.23458123586242,0.252722758433675,0,0,0,0,0,0.136072998302656,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0.527853372491847,0.876782929710299,0.834141747676794,1.0447564995665,1.02891068203972,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.402619256281115,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.651859905768103,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0,0,0.275936746304732,0,0,0,1.51482556322624,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.41326727862668,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0,0.347652977834566,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0,0,0.385813221962283,1.24905288968973,0.233931608445408,2.36358159453128,4.97349663378993,3.75005412503176,1.85494268496337 | ||
|short_description=p@chr1:135937315..135937331,+ | |short_description=p@chr1:135937315..135937331,+ | ||
}} | }} |
Latest revision as of 19:56, 4 August 2015
Short description: | p@chr1:135937315..135937331, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135937315..135937331, + |
Coexpression cluster: | MCL_coexpression_mm9:1423 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.99e-12 | 2 |
astrocyte of the hippocampus | 2.99e-12 | 2 |
smooth muscle cell | 5.43e-08 | 3 |
vascular associated smooth muscle cell | 5.43e-08 | 3 |
aortic smooth muscle cell | 5.43e-08 | 3 |
smooth muscle myoblast | 5.43e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
appendage | 1.53e-10 | 12 |
paired limb/fin | 1.53e-10 | 12 |
limb | 1.53e-10 | 12 |
paired limb/fin bud | 1.53e-10 | 12 |
limb bud | 1.53e-10 | 12 |
limb/fin field | 1.53e-10 | 12 |
limb field | 1.53e-10 | 12 |
hindlimb bud | 5.02e-10 | 5 |
stylopod | 5.02e-10 | 5 |
lower limb segment | 5.02e-10 | 5 |
multi-limb segment region | 5.02e-10 | 5 |
pelvic appendage | 5.02e-10 | 5 |
limb segment | 5.02e-10 | 5 |
paired limb/fin segment | 5.02e-10 | 5 |
pelvic appendage bud | 5.02e-10 | 5 |
subdivision of organism along appendicular axis | 5.02e-10 | 5 |
leg | 5.02e-10 | 5 |
hindlimb | 5.02e-10 | 5 |
hindlimb stylopod | 5.02e-10 | 5 |
posterior region of body | 5.02e-10 | 5 |
pelvic complex | 5.02e-10 | 5 |
hindlimb/pelvic fin field | 5.02e-10 | 5 |
appendage girdle complex | 1.01e-09 | 13 |
smooth muscle tissue | 5.43e-08 | 3 |
blood vessel smooth muscle | 5.43e-08 | 3 |
arterial system smooth muscle | 5.43e-08 | 3 |
artery smooth muscle tissue | 5.43e-08 | 3 |
aorta smooth muscle tissue | 5.43e-08 | 3 |