FFCP PHASE1:Mm9::chr9:20837766..20837781,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=241 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:20837766..20837781,- | |||
|description=CAGE_peak_at_chr9:20837766..20837781,- | |description=CAGE_peak_at_chr9:20837766..20837781,- | ||
|id=chr9:20837766..20837781,- | |id=chr9:20837766..20837781,- | ||
|ontology_enrichment_celltype=CL:0000838!8.19e-14!12;CL:0000542!1.47e-12!13;CL:0000051!1.47e-12!13;CL:0000084!2.22e-12!11;CL:0000827!2.22e-12!11;CL:0000624!2.18e-11!8;CL:0000791!5.82e-10!9;CL:0000789!5.82e-10!9;CL:0002420!5.82e-10!9;CL:0002419!5.82e-10!9;CL:0000790!5.82e-10!9;CL:0002031!1.13e-09!25;CL:0000738!4.95e-09!17;CL:0002087!4.95e-09!17;CL:0000893!2.96e-08!6;CL:0002489!2.96e-08!6;CL:0000898!2.96e-08!6;CL:0000809!2.96e-08!6;CL:0000810!2.96e-08!6;CL:0000895!2.96e-08!6;CL:0000808!2.96e-08!6;CL:0000894!2.96e-08!6;CL:0000806!2.96e-08!6;CL:0000807!2.96e-08!6;CL:0000805!2.96e-08!6;CL:0002425!2.96e-08!6;CL:0002436!2.96e-08!6;CL:0002427!2.96e-08!6;CL:0002428!2.96e-08!6;CL:0002429!2.96e-08!6;CL:0002433!2.96e-08!6;CL:0002431!2.96e-08!6;CL:0002432!2.96e-08!6;CL:0000988!7.62e-07!32;CL:0002032!7.62e-07!32;CL:0000037!7.62e-07!32;CL:0000566!7.62e-07!32;CL:0000837!7.62e-07!32 | |ontology_enrichment_celltype=CL:0000838!8.19e-14!12;CL:0000542!1.47e-12!13;CL:0000051!1.47e-12!13;CL:0000084!2.22e-12!11;CL:0000827!2.22e-12!11;CL:0000624!2.18e-11!8;CL:0000791!5.82e-10!9;CL:0000789!5.82e-10!9;CL:0002420!5.82e-10!9;CL:0002419!5.82e-10!9;CL:0000790!5.82e-10!9;CL:0002031!1.13e-09!25;CL:0000738!4.95e-09!17;CL:0002087!4.95e-09!17;CL:0000893!2.96e-08!6;CL:0002489!2.96e-08!6;CL:0000898!2.96e-08!6;CL:0000809!2.96e-08!6;CL:0000810!2.96e-08!6;CL:0000895!2.96e-08!6;CL:0000808!2.96e-08!6;CL:0000894!2.96e-08!6;CL:0000806!2.96e-08!6;CL:0000807!2.96e-08!6;CL:0000805!2.96e-08!6;CL:0002425!2.96e-08!6;CL:0002436!2.96e-08!6;CL:0002427!2.96e-08!6;CL:0002428!2.96e-08!6;CL:0002429!2.96e-08!6;CL:0002433!2.96e-08!6;CL:0002431!2.96e-08!6;CL:0002432!2.96e-08!6;CL:0000988!7.62e-07!32;CL:0002032!7.62e-07!32;CL:0000037!7.62e-07!32;CL:0000566!7.62e-07!32;CL:0000837!7.62e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000893,9.58e-24,6;CL:0002489,9.58e-24,6;CL:0000898,9.58e-24,6;CL:0000809,9.58e-24,6;CL:0000810,9.58e-24,6;CL:0000895,9.58e-24,6;CL:0000808,9.58e-24,6;CL:0000894,9.58e-24,6;CL:0000806,9.58e-24,6;CL:0000807,9.58e-24,6;CL:0000805,9.58e-24,6;CL:0002425,9.58e-24,6;CL:0002436,9.58e-24,6;CL:0002427,9.58e-24,6;CL:0002428,9.58e-24,6;CL:0002429,9.58e-24,6;CL:0002433,9.58e-24,6;CL:0002431,9.58e-24,6;CL:0002432,9.58e-24,6;CL:0000624,6.30e-18,8;CL:0000791,5.53e-16,9;CL:0000789,5.53e-16,9;CL:0002420,5.53e-16,9;CL:0002419,5.53e-16,9;CL:0000790,5.53e-16,9;CL:0000764,3.66e-13,3;CL:0000765,3.66e-13,3;CL:0000038,3.66e-13,3;CL:0000547,3.66e-13,3;CL:0000084,3.77e-13,11;CL:0000827,3.77e-13,11;CL:0002031,9.65e-13,25;CL:0000838,4.38e-12,12;CL:0000542,3.50e-11,13;CL:0000051,3.50e-11,13;CL:0000988,6.27e-10,32;CL:0002032,6.27e-10,32;CL:0000037,6.27e-10,32;CL:0000837,6.27e-10,32;CL:0000738,1.26e-08,17;CL:0002087,1.26e-08,17;CL:0002320,7.50e-07,46;CL:0000134,7.50e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,3.66e-13,3;DOID:0060083,3.66e-13,3;DOID:1240,3.66e-13,3;DOID:0050686,4.99e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002021!1.38e-08!10;UBERON:0000411!1.38e-08!10;UBERON:0001950!1.38e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.02e-09,23;UBERON:0000974,1.02e-09,23;UBERON:0004807,1.02e-09,23;UBERON:0005058,1.02e-09,23;UBERON:0003351,1.02e-09,23;UBERON:0009113,1.02e-09,23;UBERON:0003295,1.02e-09,23;UBERON:0009722,1.02e-09,23;UBERON:0005562,1.02e-09,23;UBERON:0007690,1.02e-09,23;UBERON:0006562,2.58e-09,24;UBERON:0003408,2.58e-09,24;UBERON:0001557,2.58e-09,24;UBERON:0001042,2.58e-09,24;UBERON:0008814,2.58e-09,24;UBERON:0009145,2.58e-09,24;UBERON:0000072,2.77e-08,27;UBERON:0002021,2.81e-08,10;UBERON:0000411,2.81e-08,10;UBERON:0001950,2.81e-08,10;UBERON:0004177,1.03e-07,29;UBERON:0005057,1.03e-07,29;UBERON:0002384,7.50e-07,46 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0.516493293766305,4.36445038670167,5.85161315804984,3.25314139628459,3.35043067780413,0,0.437102012094987,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,13.9706748161119,7.38077745101484,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0.139986421625363,0,0.335565212115473,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,7.11066703153331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0.203678727700633,0,0,0,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,1.5107877947794,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,0,0,0,0,0.516493293766305,4.36445038670167,5.85161315804984,3.25314139628459,3.35043067780413,0,0.437102012094987,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,13.9706748161119,7.38077745101484,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0.139986421625363,0,0.335565212115473,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,7.11066703153331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0.203678727700633,0,0,0,0.130120442962704,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,0,1.5107877947794,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr9:20837766..20837781,- | |short_description=p@chr9:20837766..20837781,- | ||
}} | }} |
Latest revision as of 21:27, 4 August 2015
Short description: | p@chr9:20837766..20837781, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:20837766..20837781, - |
Coexpression cluster: | MCL_coexpression_mm9:241 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.02e-09 | 23 |
neck | 1.02e-09 | 23 |
respiratory system epithelium | 1.02e-09 | 23 |
hemolymphoid system gland | 1.02e-09 | 23 |
pharyngeal epithelium | 1.02e-09 | 23 |
thymic region | 1.02e-09 | 23 |
pharyngeal gland | 1.02e-09 | 23 |
entire pharyngeal arch endoderm | 1.02e-09 | 23 |
thymus primordium | 1.02e-09 | 23 |
early pharyngeal endoderm | 1.02e-09 | 23 |
pharynx | 2.58e-09 | 24 |
gland of gut | 2.58e-09 | 24 |
upper respiratory tract | 2.58e-09 | 24 |
chordate pharynx | 2.58e-09 | 24 |
pharyngeal arch system | 2.58e-09 | 24 |
pharyngeal region of foregut | 2.58e-09 | 24 |
segment of respiratory tract | 2.77e-08 | 27 |
occipital lobe | 2.81e-08 | 10 |
visual cortex | 2.81e-08 | 10 |
neocortex | 2.81e-08 | 10 |
hemopoietic organ | 1.03e-07 | 29 |
immune organ | 1.03e-07 | 29 |
connective tissue | 7.50e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.66e-13 | 3 |
immune system cancer | 3.66e-13 | 3 |
leukemia | 3.66e-13 | 3 |
organ system cancer | 4.99e-07 | 6 |