FFCP PHASE1:Mm9::chr1:174223797..174223808,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=313 | |MCL_coexpression_id=313 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:174223797..174223808,- | |||
|description=CAGE_peak_at_chr1:174223797..174223808,- | |description=CAGE_peak_at_chr1:174223797..174223808,- | ||
|id=chr1:174223797..174223808,- | |id=chr1:174223797..174223808,- | ||
|ontology_enrichment_celltype=CL:0000221!1.37e-09!44;CL:0000133!1.37e-09!44;CL:0000117!3.11e-09!23;CL:0000337!3.11e-09!23;CL:0002319!3.42e-09!43;CL:0000055!1.81e-07!50 | |ontology_enrichment_celltype=CL:0000221!1.37e-09!44;CL:0000133!1.37e-09!44;CL:0000117!3.11e-09!23;CL:0000337!3.11e-09!23;CL:0002319!3.42e-09!43;CL:0000055!1.81e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.70e-14,43;CL:0002453,9.22e-14,8;CL:0000221,2.20e-13,44;CL:0000133,2.20e-13,44;CL:0000333,7.98e-11,10;CL:0000095,7.98e-11,10;CL:0000243,7.98e-11,10;CL:0000123,7.98e-11,10;CL:0000125,7.98e-11,10;CL:0000030,7.98e-11,10;CL:0000339,7.98e-11,10;CL:0000117,3.10e-10,23;CL:0000337,3.10e-10,23;CL:0000128,1.17e-09,6;CL:0000126,1.17e-09,6;CL:0000127,1.17e-09,6;CL:0002614,2.96e-09,3;CL:0002610,6.52e-09,3;CL:0002321,5.33e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.99e-25!73;UBERON:0005743!1.99e-25!73;UBERON:0000073!3.24e-24!75;UBERON:0001016!3.24e-24!75;UBERON:0001049!1.31e-20!52;UBERON:0005068!1.31e-20!52;UBERON:0006241!1.31e-20!52;UBERON:0007135!1.31e-20!52;UBERON:0004121!3.58e-19!102;UBERON:0000924!3.58e-19!102;UBERON:0006601!3.58e-19!102;UBERON:0000955!5.47e-19!50;UBERON:0006238!5.47e-19!50;UBERON:0002616!3.13e-18!49;UBERON:0000033!5.39e-15!63;UBERON:0002020!1.48e-14!34;UBERON:0002346!3.58e-14!71;UBERON:0003075!3.58e-14!71;UBERON:0007284!3.58e-14!71;UBERON:0003080!1.15e-12!40;UBERON:0002780!5.31e-12!39;UBERON:0001890!5.31e-12!39;UBERON:0006240!5.31e-12!39;UBERON:0002021!1.27e-10!10;UBERON:0000411!1.27e-10!10;UBERON:0001950!1.27e-10!10;UBERON:0002619!1.41e-10!17;UBERON:0002791!1.53e-10!29;UBERON:0003528!1.53e-10!29;UBERON:0001893!1.53e-10!29;UBERON:0000025!2.82e-10!114;UBERON:0000956!3.51e-10!21;UBERON:0001869!3.51e-10!21;UBERON:0000203!3.51e-10!21;UBERON:0004111!9.46e-10!122;UBERON:0003076!2.51e-09!12;UBERON:0003057!2.51e-09!12;UBERON:0003056!2.96e-09!49;UBERON:0007811!6.32e-08!86;UBERON:0002240!9.00e-07!6;UBERON:0005174!9.00e-07!6;UBERON:0002298!9.00e-07!6;UBERON:0001137!9.00e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!1.99e-25!73;UBERON:0005743!1.99e-25!73;UBERON:0000073!3.24e-24!75;UBERON:0001016!3.24e-24!75;UBERON:0001049!1.31e-20!52;UBERON:0005068!1.31e-20!52;UBERON:0006241!1.31e-20!52;UBERON:0007135!1.31e-20!52;UBERON:0004121!3.58e-19!102;UBERON:0000924!3.58e-19!102;UBERON:0006601!3.58e-19!102;UBERON:0000955!5.47e-19!50;UBERON:0006238!5.47e-19!50;UBERON:0002616!3.13e-18!49;UBERON:0000033!5.39e-15!63;UBERON:0002020!1.48e-14!34;UBERON:0002346!3.58e-14!71;UBERON:0003075!3.58e-14!71;UBERON:0007284!3.58e-14!71;UBERON:0003080!1.15e-12!40;UBERON:0002780!5.31e-12!39;UBERON:0001890!5.31e-12!39;UBERON:0006240!5.31e-12!39;UBERON:0002021!1.27e-10!10;UBERON:0000411!1.27e-10!10;UBERON:0001950!1.27e-10!10;UBERON:0002619!1.41e-10!17;UBERON:0002791!1.53e-10!29;UBERON:0003528!1.53e-10!29;UBERON:0001893!1.53e-10!29;UBERON:0000025!2.82e-10!114;UBERON:0000956!3.51e-10!21;UBERON:0001869!3.51e-10!21;UBERON:0000203!3.51e-10!21;UBERON:0004111!9.46e-10!122;UBERON:0003076!2.51e-09!12;UBERON:0003057!2.51e-09!12;UBERON:0003056!2.96e-09!49;UBERON:0007811!6.32e-08!86;UBERON:0002240!9.00e-07!6;UBERON:0005174!9.00e-07!6;UBERON:0002298!9.00e-07!6;UBERON:0001137!9.00e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.11e-32,73;UBERON:0001016,2.31e-31,75;UBERON:0000073,7.24e-30,54;UBERON:0001049,6.41e-26,52;UBERON:0005068,6.41e-26,52;UBERON:0006241,6.41e-26,52;UBERON:0007135,6.41e-26,52;UBERON:0004121,4.56e-25,95;UBERON:0000924,4.56e-25,95;UBERON:0006601,4.56e-25,95;UBERON:0002020,7.00e-22,34;UBERON:0002021,9.35e-21,10;UBERON:0000411,9.35e-21,10;UBERON:0001950,9.35e-21,10;UBERON:0002346,5.38e-20,64;UBERON:0003075,5.38e-20,64;UBERON:0007284,5.38e-20,64;UBERON:0000955,2.37e-19,47;UBERON:0006238,2.37e-19,47;UBERON:0002616,6.23e-18,46;UBERON:0010371,7.87e-17,73;UBERON:0002619,8.46e-17,17;UBERON:0003528,3.06e-15,29;UBERON:0002791,3.06e-15,29;UBERON:0001893,3.06e-15,29;UBERON:0003080,4.47e-15,40;UBERON:0002780,8.98e-14,39;UBERON:0001890,8.98e-14,39;UBERON:0006240,8.98e-14,39;UBERON:0010314,2.12e-13,92;UBERON:0000956,3.74e-13,21;UBERON:0001869,3.74e-13,21;UBERON:0000203,3.74e-13,21;UBERON:0003076,1.59e-12,12;UBERON:0003057,1.59e-12,12;UBERON:0003056,1.37e-11,49;UBERON:0002240,4.32e-11,6;UBERON:0005174,4.32e-11,6;UBERON:0001137,4.32e-11,6;UBERON:0002950,4.95e-11,4;UBERON:0001891,4.95e-11,4;UBERON:0009616,4.95e-11,4;UBERON:0010286,4.95e-11,4;UBERON:0000025,1.17e-09,114;UBERON:0004111,1.46e-09,122;UBERON:0002038,2.96e-09,3;UBERON:0009663,2.96e-09,3;UBERON:0009661,2.96e-09,3;UBERON:0000125,2.96e-09,3;UBERON:0002308,2.96e-09,3;UBERON:0001948,5.04e-09,5;UBERON:0002315,5.04e-09,5;UBERON:0004684,6.52e-09,3;UBERON:0002275,6.52e-09,3;UBERON:0011216,8.90e-09,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.31811709640683,1.55543919259427,1.67983705950435,1.43752564364972,0,0,0,0,0,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,1.79760066311043,1.92109152660777,0,0.945041568321835,0,3.42781181284564,5.96345060569357,0.122490799214954,0,0,3.30347642998166,4.85211884723713,5.22262213071228,0,0.365950574409639,0,13.1216009530649,5.6276261003168,4.43114918552749,4.71405736757868,4.27115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0,0,0.125666591329675,0,1.01219549843938,0.884610551949874,0,0.220841518460394,0,0,0.878342391034642,1.25668024088073,0,0,0,0,1.19832511523858,0,0,0.521472960576829,0.511430914660661,1.24672826735736,1.29793010454206,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0.730999937126662,0.878200461164203,0.805238512562231,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0,0,0.275936746304732,1.9266070798535,0.820481806145422,0,2.7771801992481,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0,0,0.238744688006273,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0.576060012515731,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0,0.183151624267265,0,0,4.51801474093653,4.14292712856459,4.01026859407578,0.515559547031063,6.85082519770642,4.5323633843382,4.72515750162264,3.60256962579376,3.17199686288943,5.1776031175182,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.320125762024346,0,0,0,0.192909220463705,0.412085900803307,0.441596760403192,0,0.177475806159338,0.715308569841963,0,0.0941093804153306,0,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0,0,0,0.467863216890817,0.214871054048298,0,0.441182838239031,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.31811709640683,1.55543919259427,1.67983705950435,1.43752564364972,0,0,0,0,0,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,1.79760066311043,1.92109152660777,0,0.945041568321835,0,3.42781181284564,5.96345060569357,0.122490799214954,0,0,3.30347642998166,4.85211884723713,5.22262213071228,0,0.365950574409639,0,13.1216009530649,5.6276261003168,4.43114918552749,4.71405736757868,4.27115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0,0,0.125666591329675,0,1.01219549843938,0.884610551949874,0,0.220841518460394,0,0,0.878342391034642,1.25668024088073,0,0,0,0,1.19832511523858,0,0,0.521472960576829,0.511430914660661,1.24672826735736,1.29793010454206,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0.730999937126662,0.878200461164203,0.805238512562231,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0,0,0.275936746304732,1.9266070798535,0.820481806145422,0,2.7771801992481,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0,0,0.238744688006273,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0.576060012515731,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0,0.183151624267265,0,0,4.51801474093653,4.14292712856459,4.01026859407578,0.515559547031063,6.85082519770642,4.5323633843382,4.72515750162264,3.60256962579376,3.17199686288943,5.1776031175182,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.320125762024346,0,0,0,0.192909220463705,0.412085900803307,0.441596760403192,0,0.177475806159338,0.715308569841963,0,0.0941093804153306,0,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0,0,0,0.467863216890817,0.214871054048298,0,0.441182838239031,0.695603506861264 | ||
|short_description=p@chr1:174223797..174223808,- | |short_description=p@chr1:174223797..174223808,- | ||
}} | }} |
Latest revision as of 07:32, 5 August 2015
Short description: | p@chr1:174223797..174223808, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174223797..174223808, - |
Coexpression cluster: | MCL_coexpression_mm9:313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.70e-14 | 43 |
oligodendrocyte precursor cell | 9.22e-14 | 8 |
ectodermal cell | 2.20e-13 | 44 |
neurectodermal cell | 2.20e-13 | 44 |
migratory neural crest cell | 7.98e-11 | 10 |
neuron associated cell | 7.98e-11 | 10 |
glial cell (sensu Vertebrata) | 7.98e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 7.98e-11 | 10 |
glial cell | 7.98e-11 | 10 |
glioblast | 7.98e-11 | 10 |
glioblast (sensu Vertebrata) | 7.98e-11 | 10 |
CNS neuron (sensu Vertebrata) | 3.10e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.10e-10 | 23 |
oligodendrocyte | 1.17e-09 | 6 |
macroglial cell | 1.17e-09 | 6 |
astrocyte | 1.17e-09 | 6 |
neuron of the substantia nigra | 2.96e-09 | 3 |
raphe nuclei neuron | 6.52e-09 | 3 |
embryonic cell | 5.33e-07 | 70 |