FFCP PHASE1:Mm9::chr1:178709356..178709358,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=504 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:178709356..178709358,+ | |||
|description=CAGE_peak_at_chr1:178709356..178709358,+ | |description=CAGE_peak_at_chr1:178709356..178709358,+ | ||
|id=chr1:178709356..178709358,+ | |id=chr1:178709356..178709358,+ | ||
|ontology_enrichment_celltype=CL:0002031!8.76e-13!25;CL:0000063!4.96e-12!66;CL:0000542!9.89e-12!13;CL:0000051!9.89e-12!13;CL:0000838!4.49e-11!12;CL:0000219!1.99e-10!54;CL:0000084!6.65e-10!11;CL:0000827!6.65e-10!11;CL:0000738!7.31e-10!17;CL:0002087!7.31e-10!17;CL:0000988!9.45e-10!32;CL:0002032!9.45e-10!32;CL:0000037!9.45e-10!32;CL:0000566!9.45e-10!32;CL:0000837!9.45e-10!32;CL:0002320!1.31e-09!46;CL:0000134!1.31e-09!46;CL:0000548!2.70e-09!115;CL:0000004!2.70e-09!115;CL:0000255!2.70e-09!115;CL:0002371!9.91e-09!118;CL:0000791!2.57e-08!9;CL:0000789!2.57e-08!9;CL:0002420!2.57e-08!9;CL:0002419!2.57e-08!9;CL:0000790!2.57e-08!9;CL:0000144!3.37e-08!121;CL:0000012!3.37e-08!121;CL:0000893!1.49e-07!6;CL:0002489!1.49e-07!6;CL:0000898!1.49e-07!6;CL:0000809!1.49e-07!6;CL:0000810!1.49e-07!6;CL:0000895!1.49e-07!6;CL:0000808!1.49e-07!6;CL:0000894!1.49e-07!6;CL:0000806!1.49e-07!6;CL:0000807!1.49e-07!6;CL:0000805!1.49e-07!6;CL:0002425!1.49e-07!6;CL:0002436!1.49e-07!6;CL:0002427!1.49e-07!6;CL:0002428!1.49e-07!6;CL:0002429!1.49e-07!6;CL:0002433!1.49e-07!6;CL:0002431!1.49e-07!6;CL:0002432!1.49e-07!6;CL:0000624!3.73e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.08e-17,25;CL:0002320,2.79e-13,46;CL:0000134,2.79e-13,46;CL:0000988,3.85e-13,32;CL:0002032,3.85e-13,32;CL:0000037,3.85e-13,32;CL:0000837,3.85e-13,32;CL:0000838,9.13e-12,12;CL:0000738,1.39e-11,17;CL:0002087,1.39e-11,17;CL:0000219,4.26e-11,54;CL:0000542,7.47e-11,13;CL:0000051,7.47e-11,13;CL:0000553,6.17e-09,6;CL:0000556,6.17e-09,6;CL:0000084,1.75e-08,11;CL:0000827,1.75e-08,11;CL:0000068,2.37e-08,3;CL:0002202,2.37e-08,3;CL:0000069,2.37e-08,3;CL:0002632,2.37e-08,3;CL:0002368,2.37e-08,3;CL:0000307,2.37e-08,3;CL:0000377,2.37e-08,3;CL:0000625,4.68e-07,1;CL:0000839,4.88e-07,13;CL:0000945,5.34e-07,1;CL:0000236,5.34e-07,1;CL:0000826,5.34e-07,1;CL:0000057,6.93e-07,1;CL:0000632,6.93e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.31e-09!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.79e-13,46;UBERON:0003126,2.37e-08,3;UBERON:0001005,2.37e-08,3;UBERON:0007196,2.37e-08,3;UBERON:0001558,2.37e-08,3 | |||
|phase1_expression=0,0,0,0.60492842261366,1.00179145989269,0,0.233612640595526,0.387369970324729,0.422366166455,0.468129052643987,2.05461561870606,0.558405112967355,1.36960583944965,0.524522414513984,0,0.607425802169478,1.39912375625629,0.630924330716475,2.05671650408608,1.69755860719212,0.0850432901510698,0.0992909512008853,2.35079810225042,0.47997726838022,1.37645568640302,0,0,0,0.380046838912748,0.252030129759931,0,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,2.01339127269284,0,2.01656279485478,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0.377857800533928,0.579728977403356,1.72084775396277,0,0,0,0,0,0.170430322578058,0,1.41335829804136,0,0,0,7.11066703153331,0.649473123033642,1.77351905832569,1.51657333504435,0,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0,0,0.238744688006273,0,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0.179427713218951,0.167884616364078,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0.685738504770831,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.60492842261366,1.00179145989269,0,0.233612640595526,0.387369970324729,0.422366166455,0.468129052643987,2.05461561870606,0.558405112967355,1.36960583944965,0.524522414513984,0,0.607425802169478,1.39912375625629,0.630924330716475,2.05671650408608,1.69755860719212,0.0850432901510698,0.0992909512008853,2.35079810225042,0.47997726838022,1.37645568640302,0,0,0,0.380046838912748,0.252030129759931,0,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,2.01339127269284,0,2.01656279485478,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0.377857800533928,0.579728977403356,1.72084775396277,0,0,0,0,0,0.170430322578058,0,1.41335829804136,0,0,0,7.11066703153331,0.649473123033642,1.77351905832569,1.51657333504435,0,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0,0,0.238744688006273,0,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0.179427713218951,0.167884616364078,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0.685738504770831,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0,0,0,0 | ||
|short_description=p@chr1:178709356..178709358,+ | |short_description=p@chr1:178709356..178709358,+ | ||
}} | }} |
Latest revision as of 08:56, 5 August 2015
Short description: | p@chr1:178709356..178709358, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:178709356..178709358, + |
Coexpression cluster: | MCL_coexpression_mm9:504 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.79e-13 | 46 |
trachea | 2.37e-08 | 3 |
respiratory airway | 2.37e-08 | 3 |
tracheobronchial tree | 2.37e-08 | 3 |
lower respiratory tract | 2.37e-08 | 3 |