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FFCP PHASE1:Mm9::chr15:66644278..66644294,-: Difference between revisions

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{{FFCP|EntrezGene=20491|HGNC=|MCL_coexpression_id=36|UniProt=Q60898,Q4FJX0|association_with_transcript=-123bp_to_ENSMUST00000100572,NM_009192,uc007was.1,uc011ztn.1_5end|description=CAGE_peak_7_at_Sla_5end|id=chr15:66644278..66644294,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,1.59e-09,32;CL:0002032,1.59e-09,32;CL:0000037,1.59e-09,32;CL:0000837,1.59e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.03e-11!48;UBERON:0002405!8.69e-11!70;UBERON:0002390!4.39e-10!45;UBERON:0003061!4.39e-10!45;UBERON:0004177!1.57e-09!29;UBERON:0005057!2.63e-08!51;UBERON:0001004!2.25e-07!42;UBERON:0000065!3.48e-07!41;UBERON:0003081!6.31e-07!88;UBERON:0003408!7.72e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.07e-20,48;UBERON:0002405,6.07e-20,48;UBERON:0002390,8.61e-18,45;UBERON:0003061,8.61e-18,45;UBERON:0004177,8.28e-15,29;UBERON:0005057,8.28e-15,29;UBERON:0000077,1.18e-11,35;UBERON:0003408,1.27e-10,24;UBERON:0002370,2.34e-10,23;UBERON:0000974,2.34e-10,23;UBERON:0004807,2.34e-10,23;UBERON:0005058,2.34e-10,23;UBERON:0003351,2.34e-10,23;UBERON:0009113,2.34e-10,23;UBERON:0003295,2.34e-10,23;UBERON:0009722,2.34e-10,23;UBERON:0005562,2.34e-10,23;UBERON:0007690,2.34e-10,23;UBERON:0001041,5.94e-10,80;UBERON:0006562,1.15e-09,24;UBERON:0001557,1.15e-09,24;UBERON:0001042,1.15e-09,24;UBERON:0008814,1.15e-09,24;UBERON:0009145,1.15e-09,24;UBERON:0001004,3.51e-09,42;UBERON:0000065,6.68e-09,41;UBERON:0003081,5.39e-08,87;UBERON:0000072,6.32e-08,27;UBERON:0005911,1.01e-07,69;UBERON:0001007,2.52e-07,116;UBERON:0001555,2.52e-07,116;UBERON:0007026,2.52e-07,116;UBERON:0004119,5.79e-07,118;UBERON:0000925,5.79e-07,118;UBERON:0006595,5.79e-07,118|phase1_expression=0.320297694209588,0,0,0,0,0,0,13.6870722848071,1.267098499365,1.17032263160997,0.34243593645101,0.239316476986009,11.8128503652532,11.0149707047937,4.33042690360362,7.28910962603373,0,25.5524353940173,23.8579114473985,23.7658205006897,1.78590909317247,11.4184593881018,7.83599367416806,3.35984087866154,2.2940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,54.409111995798,40.6294379152376,28.2702821745851,40.58797267414,42.3488200674236,33.9857247121808,0,0,0,0,0,0,0,0,0,13.2548258785612,5.80289713609076,2.68875039313971,0,0.85960031981627,0,0,0,0,0,0,2.2497492932035,0,0,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0,0.46081959976873,0.131886287730194,0.182975287204819,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,0.289864488701678,1.72084775396277,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,1.94112595522402,32.1082975722493,2.22663208597237,0.520455980298408,0,0.461230994512117,0.753613202763113,0.470354828542819,0.628332956648377,0.494389935468748,2.02439099687876,7.96149496754887,0.647067399789637,3.5334642953663,2.42437626567611,1.86391761218122,0.292780797011547,0.209446706813455,2.55457055208591,5.27186547826049,5.39912457894067,5.97230067243404,0.149790639404823,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,0.41557608911912,0.486723789203273,0.611036183101898,3.98102305952298,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.204109497453984,0.2562274405697,0,1.29351685369508,0.215567992932842,0,0.527853372491847,0,0.556094498451196,0.696504333044333,0.823128545631774,0,4.91549231119264,4.63226232806487,3.40996199274711,0,0.234526059981096,0.720248245844059,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0.492502392237286,0.324275238183423,0.584799949701329,1.53685080703735,1.47627060636409,0.630869845692382,0.205809224758569,2.64335026387038,0.528901133327089,0.426576501070468,0.232236671860439,0.644337306610467,0.201683524623343,0.667134131534611,0.190225626112559,0,0.164698954724011,1.50801125280162,1.1937388322469,0.19496408711912,1.79763881730844,0,0.796565093017469,0.379335801906163,0.342745537829186,0,0.610953983535943,0.387904974335251,0.350679099451593,0.189709611372772,0,0,0.370191491765402,0.889357881261447,1.50160595144485,1.96558995113203,0.899448449539415,1.82574109249653,2.17059443777175,2.03700681425136,2.87696137450811,2.91843408195064,2.19649130550465,0,3.34926852901653,2.18426371180192,0,0.717589654087649,0,4.98833613449833,0.189491411770485,0.488894929326078,0.339490171550376,0.938760993154008,0.837531287209079,0.952174563544055,1.56106918286239,1.57635144106191,1.55025282754142,2.07291199254733,3.27726629431476,5.00786447411097,4.05017364028232,0,3.80733978673097,0.983528546038072,1.37968373152366,0.160550589987792,0.35163505977661,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.35613120733451,0.325773918707152,1.64970122972535,1.32745138339963,0.485561272309963,0,1.32023555829129,0.295301892880773,0,0.258428293168221,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0,0.18006109403131,0.38807605134826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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20491
|HGNC=
|MCL_coexpression_id=36
|TSSclassifier=NA
|UniProt=uniprot:Q60898,uniprot:Q4FJX0
|association_with_transcript=-123bp_to_ENSMUST00000100572,NM_009192,uc007was.1,uc011ztn.1_5end
|cluster_id=chr15:66644278..66644294,-
|description=CAGE_peak_7_at_Sla_5end
|id=chr15:66644278..66644294,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000988,1.59e-09,32;CL:0002032,1.59e-09,32;CL:0000037,1.59e-09,32;CL:0000837,1.59e-09,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!2.03e-11!48;UBERON:0002405!8.69e-11!70;UBERON:0002390!4.39e-10!45;UBERON:0003061!4.39e-10!45;UBERON:0004177!1.57e-09!29;UBERON:0005057!2.63e-08!51;UBERON:0001004!2.25e-07!42;UBERON:0000065!3.48e-07!41;UBERON:0003081!6.31e-07!88;UBERON:0003408!7.72e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.07e-20,48;UBERON:0002405,6.07e-20,48;UBERON:0002390,8.61e-18,45;UBERON:0003061,8.61e-18,45;UBERON:0004177,8.28e-15,29;UBERON:0005057,8.28e-15,29;UBERON:0000077,1.18e-11,35;UBERON:0003408,1.27e-10,24;UBERON:0002370,2.34e-10,23;UBERON:0000974,2.34e-10,23;UBERON:0004807,2.34e-10,23;UBERON:0005058,2.34e-10,23;UBERON:0003351,2.34e-10,23;UBERON:0009113,2.34e-10,23;UBERON:0003295,2.34e-10,23;UBERON:0009722,2.34e-10,23;UBERON:0005562,2.34e-10,23;UBERON:0007690,2.34e-10,23;UBERON:0001041,5.94e-10,80;UBERON:0006562,1.15e-09,24;UBERON:0001557,1.15e-09,24;UBERON:0001042,1.15e-09,24;UBERON:0008814,1.15e-09,24;UBERON:0009145,1.15e-09,24;UBERON:0001004,3.51e-09,42;UBERON:0000065,6.68e-09,41;UBERON:0003081,5.39e-08,87;UBERON:0000072,6.32e-08,27;UBERON:0005911,1.01e-07,69;UBERON:0001007,2.52e-07,116;UBERON:0001555,2.52e-07,116;UBERON:0007026,2.52e-07,116;UBERON:0004119,5.79e-07,118;UBERON:0000925,5.79e-07,118;UBERON:0006595,5.79e-07,118
|phase1_expression=0.320297694209588,0,0,0,0,0,0,13.6870722848071,1.267098499365,1.17032263160997,0.34243593645101,0.239316476986009,11.8128503652532,11.0149707047937,4.33042690360362,7.28910962603373,0,25.5524353940173,23.8579114473985,23.7658205006897,1.78590909317247,11.4184593881018,7.83599367416806,3.35984087866154,2.2940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,54.409111995798,40.6294379152376,28.2702821745851,40.58797267414,42.3488200674236,33.9857247121808,0,0,0,0,0,0,0,0,0,13.2548258785612,5.80289713609076,2.68875039313971,0,0.85960031981627,0,0,0,0,0,0,2.2497492932035,0,0,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0,0.46081959976873,0.131886287730194,0.182975287204819,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,0.289864488701678,1.72084775396277,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,1.94112595522402,32.1082975722493,2.22663208597237,0.520455980298408,0,0.461230994512117,0.753613202763113,0.470354828542819,0.628332956648377,0.494389935468748,2.02439099687876,7.96149496754887,0.647067399789637,3.5334642953663,2.42437626567611,1.86391761218122,0.292780797011547,0.209446706813455,2.55457055208591,5.27186547826049,5.39912457894067,5.97230067243404,0.149790639404823,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,0.41557608911912,0.486723789203273,0.611036183101898,3.98102305952298,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.204109497453984,0.2562274405697,0,1.29351685369508,0.215567992932842,0,0.527853372491847,0,0.556094498451196,0.696504333044333,0.823128545631774,0,4.91549231119264,4.63226232806487,3.40996199274711,0,0.234526059981096,0.720248245844059,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0.492502392237286,0.324275238183423,0.584799949701329,1.53685080703735,1.47627060636409,0.630869845692382,0.205809224758569,2.64335026387038,0.528901133327089,0.426576501070468,0.232236671860439,0.644337306610467,0.201683524623343,0.667134131534611,0.190225626112559,0,0.164698954724011,1.50801125280162,1.1937388322469,0.19496408711912,1.79763881730844,0,0.796565093017469,0.379335801906163,0.342745537829186,0,0.610953983535943,0.387904974335251,0.350679099451593,0.189709611372772,0,0,0.370191491765402,0.889357881261447,1.50160595144485,1.96558995113203,0.899448449539415,1.82574109249653,2.17059443777175,2.03700681425136,2.87696137450811,2.91843408195064,2.19649130550465,0,3.34926852901653,2.18426371180192,0,0.717589654087649,0,4.98833613449833,0.189491411770485,0.488894929326078,0.339490171550376,0.938760993154008,0.837531287209079,0.952174563544055,1.56106918286239,1.57635144106191,1.55025282754142,2.07291199254733,3.27726629431476,5.00786447411097,4.05017364028232,0,3.80733978673097,0.983528546038072,1.37968373152366,0.160550589987792,0.35163505977661,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.35613120733451,0.325773918707152,1.64970122972535,1.32745138339963,0.485561272309963,0,1.32023555829129,0.295301892880773,0,0.258428293168221,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.658196082408484,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,1.15420377059036,0.807322133479528,0.361877549568935,0.238744688006273,0.492422699235184,1.45740418314925,0.18542530201051,10.2522528478712,3.50857675537478,8.70414278637645,5.46268525313604,9.56859594047176,8.46479240864134,4.07948231985253,5.87796099759364,5.2515990045681,0,0.316335993581135,0,0.540026704109006,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,0.26175594198403,0.388844919875379,1.24267862617385,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.168956125490778,0.234714477291508,0,0,0,0,20.2247117202034,2.63542779877213,1.95150818613172,4.28738715826724,8.95133478337407,12.3182439964384,10.9377859063172,12.4059202826645,14.5391687925333,12.49791629142,17.6445823989471,16.3729239642784,15.9711657122947,25.3622877734005,0.680191150845634,0,0,0,0.579568782096571,1.12609485270709,1.28206136987086,1.2862102744744,1.00314420807073,0,0,0.572895513439397,0,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0,0.729320151204882,0.419226325255965,0.551530525350042,1.77797382241292,0.206035057238894,1.60459604795908,0.758091635291392,1.01391719956096,0.565879024158229,0.561849044819294,0.704276676453562,0.631790158511746,0.476293691283074,1.0429589335037,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,1.1921809497366,0.872078499793971,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,1.16965804222704,0.429742108096597,1.3390183244819,1.54413993383661,0.927471342481686
|short_description=p7@Sla
}}

Revision as of 09:48, 5 August 2015

Short description:p7@Sla
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Sla_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: -123bp_to_ENSMUST00000100572, NM_009192, uc007was.1, uc011ztn.1_5end
EntrezGene:20491
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Sla

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.81
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.29
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A225.55
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A623.77
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G854.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H140.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H328.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G940.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H242.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H932.11
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.97
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G210.25
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D15.46
spleen, neonate N20.CNhs11112.824-19H19.57
spleen, neonate N25.CNhs11099.1354-25G38.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.25
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B520.22
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C18.95
thymus, embryo E18.CNhs10595.1273-19G412.32
thymus, neonate N02.CNhs11181.1541-43F810.94
thymus, neonate N03.CNhs11137.2104-43C712.41
thymus, neonate N06.CNhs11197.681-26C414.54
thymus, neonate N07.CNhs11211.713-19D312.50
thymus, neonate N10.CNhs11194.748-24E417.64
thymus, neonate N20.CNhs11186.820-7A216.37
thymus, neonate N25.CNhs11125.1362-25G715.97
thymus, neonate N30.CNhs11132.1393-42G225.36
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system6.07e-2048
immune system6.07e-2048
hematopoietic system8.61e-1845
blood island8.61e-1845
hemopoietic organ8.28e-1529
immune organ8.28e-1529
mixed endoderm/mesoderm-derived structure1.18e-1135
gland of gut1.27e-1024
thymus2.34e-1023
neck2.34e-1023
respiratory system epithelium2.34e-1023
hemolymphoid system gland2.34e-1023
pharyngeal epithelium2.34e-1023
thymic region2.34e-1023
pharyngeal gland2.34e-1023
entire pharyngeal arch endoderm2.34e-1023
thymus primordium2.34e-1023
early pharyngeal endoderm2.34e-1023
foregut5.94e-1080
pharynx1.15e-0924
upper respiratory tract1.15e-0924
chordate pharynx1.15e-0924
pharyngeal arch system1.15e-0924
pharyngeal region of foregut1.15e-0924
respiratory system3.51e-0942
respiratory tract6.68e-0941
lateral plate mesoderm5.39e-0887
segment of respiratory tract6.32e-0827
endo-epithelium1.01e-0769
digestive system2.52e-07116
digestive tract2.52e-07116
primitive gut2.52e-07116
endoderm-derived structure5.79e-07118
endoderm5.79e-07118
presumptive endoderm5.79e-07118
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