Personal tools

FFCP PHASE1:Mm9::chr6:145198906..145198917,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=16653|HGNC=|MCL_coexpression_id=7|UniProt=P32883|association_with_transcript=-147bp_to_ENSMUST00000032399_5end|description=CAGE_peak_2_at_Kras_5end|id=chr6:145198906..145198917,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000893,5.86e-18,6;CL:0002489,5.86e-18,6;CL:0000898,5.86e-18,6;CL:0000809,5.86e-18,6;CL:0000810,5.86e-18,6;CL:0000895,5.86e-18,6;CL:0000808,5.86e-18,6;CL:0000894,5.86e-18,6;CL:0000806,5.86e-18,6;CL:0000807,5.86e-18,6;CL:0000805,5.86e-18,6;CL:0002425,5.86e-18,6;CL:0002436,5.86e-18,6;CL:0002427,5.86e-18,6;CL:0002428,5.86e-18,6;CL:0002429,5.86e-18,6;CL:0002433,5.86e-18,6;CL:0002431,5.86e-18,6;CL:0002432,5.86e-18,6;CL:0000838,1.18e-13,12;CL:0000624,1.54e-13,8;CL:0000542,1.34e-12,13;CL:0000051,1.34e-12,13;CL:0000791,4.62e-12,9;CL:0000789,4.62e-12,9;CL:0002420,4.62e-12,9;CL:0002419,4.62e-12,9;CL:0000790,4.62e-12,9;CL:0000084,6.58e-10,11;CL:0000827,6.58e-10,11;CL:0000738,1.28e-09,17;CL:0002087,1.28e-09,17;CL:0000349,5.12e-09,3;CL:0000351,5.12e-09,3;CL:0000057,9.86e-08,1;CL:0000632,9.86e-08,1;CL:0000945,1.33e-07,1;CL:0000236,1.33e-07,1;CL:0000826,1.33e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,5.12e-09,3;UBERON:0000307,5.12e-09,3;UBERON:0007010,5.12e-09,3|phase1_expression=0.480446541314382,1.04692622291808,0.909998478779072,0,0,0,0.233612640595526,0.774739940649458,13.6565060487117,7.2560003159818,2.56826952338257,1.99430397488341,0.684802919724823,0.34968160967599,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,0.255129870453209,0.297872853602656,0,0.319984845586813,0.45881856213434,0,0.86152399231815,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0.61506478758457,0,0,0,0,0.837063261473815,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0,0,0,0,1.34226084846189,0.725362142011344,0.336093799142464,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0.284743361598206,0,0.605809546665472,0.302286240427142,0.289864488701678,1.72084775396277,0,0.539703191637817,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0.173485326766136,0.608930956624282,0.461230994512117,0.452167921657868,0.23517741427141,0,0.988779870937496,0,0,0.647067399789637,0.883366073841574,0,0,0.292780797011547,0,0.255457055208591,0.359445373517761,0,0.254140454146129,0.149790639404823,0,0.251308704225729,0.347648640384553,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0.180062129805349,0.452114453507145,0.204109497453984,0.384341160854549,0.562210347358373,0.258703370739016,0,0,0,0.43839146485515,0,0.696504333044333,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0.243206428637567,0.438599962275997,0.439100230582101,0.268412837520744,0,0,0,1.05780226665418,0,0,0,0.201683524623343,0,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0.948339504765408,0.228497025219458,0,0,0.581857461502877,0.210407459670956,0.189709611372772,0.590440591918409,0,0.370191491765402,0,0.83422552858047,0.786235980452812,0,0.405720242777006,0.72353147925725,0.763877555344259,0,0,0.549122826376163,1.43768206527355,0.372140947668503,0,0.505157755894224,0.179397413521912,0,0.739012760666419,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,1.17080188714679,0,0.221464689648775,0.478364305972461,0.655453258862952,0.345369963731791,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0,0.234423373184406,0.327869890753351,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.36012218806262,0,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.469343416127421,0.847328283455281,0,0.49465875882444,0,0.301564624640779,0.119372344003136,0.164140899745061,0.582961673259701,0.556275906031529,0.170870880797853,0.412773735926445,0.185194527369712,0.376736914009382,0.136694227721025,0.228778173206523,0,0.279902904647316,0.552799895217695,0,0.158167996790568,0.406638934253697,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.2604087696879,0.104859344425711,0,0,0.948033361884535,0.810900861160657,0.102710957164827,0.51968329191118,0.895133478337407,0.993406773906324,0.360586348559907,0.738447635872886,0.504832249740738,0.533447646584999,0.806609481094724,0.38983152295901,0.481059208201647,0.818138315270983,0.226730383615211,0.665957860122194,1.07656627931371,1.00730769818447,0,0.187682475451182,0.36630324853453,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.171853182343688,2.05524755931193,0,0,0,0.453142408984205,0.51776031175182,0.31136204275253,0,0.341467211508268,0.486213434136588,0.419226325255965,0,0,0.824140228955577,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.402048282689293,0.952587382566147,0.347652977834566,0.77163688185482,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0,0.407412341537585,0,0,0.394017929502254,0.818462086339379,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p2@Kras}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16653
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=uniprot:P32883
|association_with_transcript=-147bp_to_ENSMUST00000032399_5end
|cluster_id=chr6:145198906..145198917,-
|description=CAGE_peak_2_at_Kras_5end
|id=chr6:145198906..145198917,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000893,5.86e-18,6;CL:0002489,5.86e-18,6;CL:0000898,5.86e-18,6;CL:0000809,5.86e-18,6;CL:0000810,5.86e-18,6;CL:0000895,5.86e-18,6;CL:0000808,5.86e-18,6;CL:0000894,5.86e-18,6;CL:0000806,5.86e-18,6;CL:0000807,5.86e-18,6;CL:0000805,5.86e-18,6;CL:0002425,5.86e-18,6;CL:0002436,5.86e-18,6;CL:0002427,5.86e-18,6;CL:0002428,5.86e-18,6;CL:0002429,5.86e-18,6;CL:0002433,5.86e-18,6;CL:0002431,5.86e-18,6;CL:0002432,5.86e-18,6;CL:0000838,1.18e-13,12;CL:0000624,1.54e-13,8;CL:0000542,1.34e-12,13;CL:0000051,1.34e-12,13;CL:0000791,4.62e-12,9;CL:0000789,4.62e-12,9;CL:0002420,4.62e-12,9;CL:0002419,4.62e-12,9;CL:0000790,4.62e-12,9;CL:0000084,6.58e-10,11;CL:0000827,6.58e-10,11;CL:0000738,1.28e-09,17;CL:0002087,1.28e-09,17;CL:0000349,5.12e-09,3;CL:0000351,5.12e-09,3;CL:0000057,9.86e-08,1;CL:0000632,9.86e-08,1;CL:0000945,1.33e-07,1;CL:0000236,1.33e-07,1;CL:0000826,1.33e-07,1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000358,5.12e-09,3;UBERON:0000307,5.12e-09,3;UBERON:0007010,5.12e-09,3
|phase1_expression=0.480446541314382,1.04692622291808,0.909998478779072,0,0,0,0.233612640595526,0.774739940649458,13.6565060487117,7.2560003159818,2.56826952338257,1.99430397488341,0.684802919724823,0.34968160967599,0.333109761815663,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,0.255129870453209,0.297872853602656,0,0.319984845586813,0.45881856213434,0,0.86152399231815,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0.61506478758457,0,0,0,0,0.837063261473815,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0,0,0,0,1.34226084846189,0.725362142011344,0.336093799142464,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0.284743361598206,0,0.605809546665472,0.302286240427142,0.289864488701678,1.72084775396277,0,0.539703191637817,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0.173485326766136,0.608930956624282,0.461230994512117,0.452167921657868,0.23517741427141,0,0.988779870937496,0,0,0.647067399789637,0.883366073841574,0,0,0.292780797011547,0,0.255457055208591,0.359445373517761,0,0.254140454146129,0.149790639404823,0,0.251308704225729,0.347648640384553,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0.180062129805349,0.452114453507145,0.204109497453984,0.384341160854549,0.562210347358373,0.258703370739016,0,0,0,0.43839146485515,0,0.696504333044333,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0.243206428637567,0.438599962275997,0.439100230582101,0.268412837520744,0,0,0,1.05780226665418,0,0,0,0.201683524623343,0,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0.948339504765408,0.228497025219458,0,0,0.581857461502877,0.210407459670956,0.189709611372772,0.590440591918409,0,0.370191491765402,0,0.83422552858047,0.786235980452812,0,0.405720242777006,0.72353147925725,0.763877555344259,0,0,0.549122826376163,1.43768206527355,0.372140947668503,0,0.505157755894224,0.179397413521912,0,0.739012760666419,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,1.17080188714679,0,0.221464689648775,0.478364305972461,0.655453258862952,0.345369963731791,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0,0.234423373184406,0.327869890753351,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.36012218806262,0,0.428674070063185,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.469343416127421,0.847328283455281,0,0.49465875882444,0,0.301564624640779,0.119372344003136,0.164140899745061,0.582961673259701,0.556275906031529,0.170870880797853,0.412773735926445,0.185194527369712,0.376736914009382,0.136694227721025,0.228778173206523,0,0.279902904647316,0.552799895217695,0,0.158167996790568,0.406638934253697,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.2604087696879,0.104859344425711,0,0,0.948033361884535,0.810900861160657,0.102710957164827,0.51968329191118,0.895133478337407,0.993406773906324,0.360586348559907,0.738447635872886,0.504832249740738,0.533447646584999,0.806609481094724,0.38983152295901,0.481059208201647,0.818138315270983,0.226730383615211,0.665957860122194,1.07656627931371,1.00730769818447,0,0.187682475451182,0.36630324853453,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.171853182343688,2.05524755931193,0,0,0,0.453142408984205,0.51776031175182,0.31136204275253,0,0.341467211508268,0.486213434136588,0.419226325255965,0,0,0.824140228955577,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.402048282689293,0.952587382566147,0.347652977834566,0.77163688185482,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0,0.407412341537585,0,0,0.394017929502254,0.818462086339379,0,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843
|short_description=p2@Kras
}}

Revision as of 09:52, 5 August 2015

Short description:p2@Kras
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Kras_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: -147bp_to_ENSMUST00000032399_5end
EntrezGene:16653
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Kras

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
thymocyte5.86e-186
double negative thymocyte5.86e-186
naive T cell5.86e-186
double-positive, alpha-beta thymocyte5.86e-186
CD4-positive, alpha-beta thymocyte5.86e-186
naive thymus-derived CD4-positive, alpha-beta T cell5.86e-186
DN4 thymocyte5.86e-186
DN1 thymic pro-T cell5.86e-186
DN2 thymocyte5.86e-186
DN3 thymocyte5.86e-186
immature single positive thymocyte5.86e-186
early T lineage precursor5.86e-186
mature CD4 single-positive thymocyte5.86e-186
resting double-positive thymocyte5.86e-186
double-positive blast5.86e-186
CD69-positive double-positive thymocyte5.86e-186
CD69-positive, CD4-positive single-positive thymocyte5.86e-186
CD4-positive, CD8-intermediate double-positive thymocyte5.86e-186
CD24-positive, CD4 single-positive thymocyte5.86e-186
lymphoid lineage restricted progenitor cell1.18e-1312
CD4-positive, alpha-beta T cell1.54e-138
lymphocyte1.34e-1213
common lymphoid progenitor1.34e-1213
mature alpha-beta T cell4.62e-129
alpha-beta T cell4.62e-129
immature T cell4.62e-129
mature T cell4.62e-129
immature alpha-beta T cell4.62e-129
T cell6.58e-1011
pro-T cell6.58e-1011
leukocyte1.28e-0917
nongranular leukocyte1.28e-0917
extraembryonic cell5.12e-093
trophoblast cell5.12e-093
fibroblast9.86e-081
hepatic stellate cell9.86e-081
lymphocyte of B lineage1.33e-071
B cell1.33e-071
pro-B cell1.33e-071

Uber anatomy
Ontology termp-valuen
blastocyst5.12e-093
blastula5.12e-093
cleaving embryo5.12e-093
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:145198906..145198917,-&oldid=3886207"