FFCP PHASE1:Mm9::chr1:84367076..84367079,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1052 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:84367076..84367079,- | |||
|description=CAGE_peak_at_chr1:84367076..84367079,- | |description=CAGE_peak_at_chr1:84367076..84367079,- | ||
|id=chr1:84367076..84367079,- | |id=chr1:84367076..84367079,- | ||
|ontology_enrichment_celltype=CL:0000117!8.51e-27!23;CL:0000337!8.51e-27!23;CL:0000221!5.72e-20!44;CL:0000133!5.72e-20!44;CL:0000540!2.55e-19!33;CL:0000047!2.55e-19!33;CL:0000031!2.55e-19!33;CL:0000404!2.55e-19!33;CL:0002319!8.37e-19!43;CL:0000393!1.49e-15!39;CL:0000211!1.49e-15!39;CL:0000055!2.40e-15!50;CL:0002321!2.57e-10!70;CL:0000220!2.57e-10!70;CL:0002614!1.24e-07!3;CL:0002612!1.37e-07!3;CL:0002613!1.58e-07!3;CL:0000120!2.11e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0002614,4.56e-11,3;CL:0002613,5.71e-11,3;CL:0002612,7.15e-11,3;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.41e-28!73;UBERON:0005743!1.41e-28!73;UBERON:0000073!1.40e-27!75;UBERON:0001016!1.40e-27!75;UBERON:0001049!3.97e-24!52;UBERON:0005068!3.97e-24!52;UBERON:0006241!3.97e-24!52;UBERON:0007135!3.97e-24!52;UBERON:0004121!8.88e-22!102;UBERON:0000924!8.88e-22!102;UBERON:0006601!8.88e-22!102;UBERON:0002020!4.86e-20!34;UBERON:0002346!5.17e-20!71;UBERON:0003075!5.17e-20!71;UBERON:0007284!5.17e-20!71;UBERON:0002616!9.39e-18!49;UBERON:0000955!2.83e-17!50;UBERON:0006238!2.83e-17!50;UBERON:0000033!6.81e-15!63;UBERON:0003080!1.70e-13!40;UBERON:0002420!4.50e-13!8;UBERON:0007245!4.50e-13!8;UBERON:0010009!4.50e-13!8;UBERON:0010011!4.50e-13!8;UBERON:0000454!4.50e-13!8;UBERON:0003076!1.10e-12!12;UBERON:0003057!1.10e-12!12;UBERON:0002791!1.24e-12!29;UBERON:0003528!1.24e-12!29;UBERON:0001893!1.24e-12!29;UBERON:0002240!1.64e-12!6;UBERON:0005174!1.64e-12!6;UBERON:0001137!1.64e-12!6;UBERON:0002780!1.81e-12!39;UBERON:0001890!1.81e-12!39;UBERON:0006240!1.81e-12!39;UBERON:0003056!2.54e-11!49;UBERON:0001948!5.23e-11!5;UBERON:0002315!5.23e-11!5;UBERON:0007811!3.35e-09!86;UBERON:0002950!6.38e-09!4;UBERON:0001891!6.38e-09!4;UBERON:0009616!6.38e-09!4;UBERON:0002298!1.75e-08!6;UBERON:0000153!6.79e-08!94;UBERON:0002038!1.24e-07!3;UBERON:0002308!1.24e-07!3;UBERON:0009663!1.24e-07!3;UBERON:0009661!1.24e-07!3;UBERON:0006331!1.24e-07!3;UBERON:0000125!1.24e-07!3;UBERON:0002257!1.37e-07!3;UBERON:0000369!2.98e-07!5;UBERON:0002435!2.98e-07!5;UBERON:0000204!2.98e-07!5;UBERON:0010082!2.98e-07!5;UBERON:0000025!3.27e-07!114;UBERON:0004111!5.85e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.23e-15,8;UBERON:0007245,1.23e-15,8;UBERON:0010009,1.23e-15,8;UBERON:0010011,1.23e-15,8;UBERON:0000454,1.23e-15,8;UBERON:0002038,4.56e-11,3;UBERON:0009663,4.56e-11,3;UBERON:0009661,4.56e-11,3;UBERON:0000125,4.56e-11,3;UBERON:0002308,4.56e-11,3;UBERON:0002257,7.15e-11,3;UBERON:0002020,1.04e-08,34;UBERON:0002950,1.23e-08,4;UBERON:0001891,1.23e-08,4;UBERON:0009616,1.23e-08,4;UBERON:0010286,1.23e-08,4;UBERON:0000369,4.17e-07,5;UBERON:0002435,4.17e-07,5;UBERON:0000204,4.17e-07,5;UBERON:0010082,4.17e-07,5;UBERON:0001948,4.77e-07,5;UBERON:0002315,4.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0.599200221036809,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0.479227355091182,0,0,0.255374676170375,0.307213066512487,0.659431438650969,1.46380229763855,0.52091337055676,0.837548997004143,0.56276261003168,1.5279824777681,0.883885756421003,1.13897344639282,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.149790639404823,0,0.251308704225729,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.25384382367503,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0.599200221036809,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0.479227355091182,0,0,0.255374676170375,0.307213066512487,0.659431438650969,1.46380229763855,0.52091337055676,0.837548997004143,0.56276261003168,1.5279824777681,0.883885756421003,1.13897344639282,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.149790639404823,0,0.251308704225729,0.173824320192276,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.25384382367503,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr1:84367076..84367079,- | |short_description=p@chr1:84367076..84367079,- | ||
}} | }} |
Latest revision as of 02:25, 6 August 2015
Short description: | p@chr1:84367076..84367079, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:84367076..84367079, - |
Coexpression cluster: | MCL_coexpression_mm9:1052 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.24e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-12 | 23 |
neuron of the substantia nigra | 4.56e-11 | 3 |
striatum neuron | 5.71e-11 | 3 |
neuron of the ventral spinal cord | 7.15e-11 | 3 |
neuron | 6.05e-09 | 33 |
neuronal stem cell | 6.05e-09 | 33 |
neuroblast | 6.05e-09 | 33 |
electrically signaling cell | 6.05e-09 | 33 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
basal ganglion | 1.23e-15 | 8 |
nuclear complex of neuraxis | 1.23e-15 | 8 |
aggregate regional part of brain | 1.23e-15 | 8 |
collection of basal ganglia | 1.23e-15 | 8 |
cerebral subcortex | 1.23e-15 | 8 |
substantia nigra | 4.56e-11 | 3 |
telencephalic nucleus | 4.56e-11 | 3 |
midbrain nucleus | 4.56e-11 | 3 |
neural nucleus | 4.56e-11 | 3 |
nucleus of brain | 4.56e-11 | 3 |
ventral horn of spinal cord | 7.15e-11 | 3 |
gray matter | 1.04e-08 | 34 |
regional part of midbrain | 1.23e-08 | 4 |
midbrain | 1.23e-08 | 4 |
presumptive midbrain | 1.23e-08 | 4 |
midbrain neural tube | 1.23e-08 | 4 |
corpus striatum | 4.17e-07 | 5 |
striatum | 4.17e-07 | 5 |
ventral part of telencephalon | 4.17e-07 | 5 |
future corpus striatum | 4.17e-07 | 5 |
regional part of spinal cord | 4.77e-07 | 5 |
gray matter of spinal cord | 4.77e-07 | 5 |