FFCP PHASE1:Mm9::chr1:89673511..89673516,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=234 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000157343_5end | |association_with_transcript=0bp_to_ENSMUST00000157343_5end | ||
|cluster_id=chr1:89673511..89673516,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000157343_5end | |description=CAGE_peak_1_at_ENSMUST00000157343_5end | ||
|id=chr1:89673511..89673516,+ | |id=chr1:89673511..89673516,+ | ||
|ontology_enrichment_celltype=CL:0000723!2.06e-11!91;CL:0000048!2.06e-11!91;CL:0000034!4.94e-11!97;CL:0000117!8.67e-09!23;CL:0000337!8.67e-09!23;CL:0000548!5.81e-08!115;CL:0000004!5.81e-08!115;CL:0000255!5.81e-08!115;CL:0000144!1.28e-07!121;CL:0000012!1.28e-07!121;CL:0002371!1.38e-07!118;CL:0000055!1.77e-07!50;CL:0000393!6.26e-07!39;CL:0000211!6.26e-07!39 | |ontology_enrichment_celltype=CL:0000723!2.06e-11!91;CL:0000048!2.06e-11!91;CL:0000034!4.94e-11!97;CL:0000117!8.67e-09!23;CL:0000337!8.67e-09!23;CL:0000548!5.81e-08!115;CL:0000004!5.81e-08!115;CL:0000255!5.81e-08!115;CL:0000144!1.28e-07!121;CL:0000012!1.28e-07!121;CL:0002371!1.38e-07!118;CL:0000055!1.77e-07!50;CL:0000393!6.26e-07!39;CL:0000211!6.26e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.13e-08,91;CL:0000048,1.13e-08,91;CL:0000034,1.07e-07,97;CL:0000117,2.35e-07,23;CL:0000337,2.35e-07,23;CL:0002614,4.47e-07,3;CL:0002610,6.87e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.12e-15!73;UBERON:0005743!1.12e-15!73;UBERON:0000073!1.03e-14!75;UBERON:0001016!1.03e-14!75;UBERON:0001049!1.26e-13!52;UBERON:0005068!1.26e-13!52;UBERON:0006241!1.26e-13!52;UBERON:0007135!1.26e-13!52;UBERON:0000955!2.21e-13!50;UBERON:0006238!2.21e-13!50;UBERON:0002616!6.38e-13!49;UBERON:0002020!2.85e-12!34;UBERON:0000033!1.07e-10!63;UBERON:0002346!3.02e-10!71;UBERON:0003075!3.02e-10!71;UBERON:0007284!3.02e-10!71;UBERON:0002791!3.13e-10!29;UBERON:0003528!3.13e-10!29;UBERON:0001893!3.13e-10!29;UBERON:0003080!4.29e-10!40;UBERON:0004121!5.12e-10!102;UBERON:0000924!5.12e-10!102;UBERON:0006601!5.12e-10!102;UBERON:0002780!1.48e-09!39;UBERON:0001890!1.48e-09!39;UBERON:0006240!1.48e-09!39;UBERON:0004111!5.09e-09!122;UBERON:0000025!1.61e-08!114;UBERON:0007811!3.50e-08!86;UBERON:0003056!6.12e-08!49;UBERON:0002619!3.11e-07!17;UBERON:0000956!3.89e-07!21;UBERON:0001869!3.89e-07!21;UBERON:0000203!3.89e-07!21;UBERON:0000153!7.24e-07!94;UBERON:0000475!7.99e-07!200;UBERON:0000477!8.72e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.49e-14,73;UBERON:0001016,1.36e-13,75;UBERON:0000073,2.83e-13,54;UBERON:0002020,2.89e-11,34;UBERON:0001049,5.63e-11,52;UBERON:0005068,5.63e-11,52;UBERON:0006241,5.63e-11,52;UBERON:0007135,5.63e-11,52;UBERON:0003528,1.04e-10,29;UBERON:0002791,1.04e-10,29;UBERON:0001893,1.04e-10,29;UBERON:0000955,4.22e-10,47;UBERON:0006238,4.22e-10,47;UBERON:0004121,4.88e-10,95;UBERON:0000924,4.88e-10,95;UBERON:0006601,4.88e-10,95;UBERON:0002616,2.45e-09,46;UBERON:0003080,6.91e-09,40;UBERON:0002950,1.41e-08,4;UBERON:0001891,1.41e-08,4;UBERON:0009616,1.41e-08,4;UBERON:0010286,1.41e-08,4;UBERON:0002619,2.67e-08,17;UBERON:0002780,5.60e-08,39;UBERON:0001890,5.60e-08,39;UBERON:0006240,5.60e-08,39;UBERON:0002021,6.57e-08,10;UBERON:0000411,6.57e-08,10;UBERON:0001950,6.57e-08,10;UBERON:0002346,7.32e-08,64;UBERON:0003075,7.32e-08,64;UBERON:0007284,7.32e-08,64;UBERON:0000956,8.09e-08,21;UBERON:0001869,8.09e-08,21;UBERON:0000203,8.09e-08,21;UBERON:0002038,4.47e-07,3;UBERON:0009663,4.47e-07,3;UBERON:0009661,4.47e-07,3;UBERON:0000125,4.47e-07,3;UBERON:0002308,4.47e-07,3;UBERON:0004684,6.87e-07,3;UBERON:0002275,6.87e-07,3 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,1.29123323441576,1.267098499365,1.40438715793196,0.34243593645101,0.638177271962691,1.19840510951844,1.74840804837995,0.666219523631325,0.202475267389826,0,0.315462165358238,0.822686601634433,0.42438965179803,1.10556277196391,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,3.81018404075779,0.61506478758457,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0.683045484958446,0,0.125896817975577,0.405507724878058,0.367093504323363,0,0.872100625521786,0.659058548203415,1.1665793944457,0.839918529752175,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0.85960031981627,1.03134418455488,0.606949382578793,1.05798195854407,1.26766280701236,0,0,4.94944844504769,2.96659908770092,1.4209602298922,0.898800331555214,1.92109152660777,0.207379224616955,0.270011876663381,0.210324961351382,0.856952953211411,1.32521124570968,0.367472397644862,0.383381884072945,1.83843757322004,5.50579404996943,4.46905683298157,6.45147439676223,0.527545150920775,0.823388792421687,0.52091337055676,7.2587579740359,7.31591393041184,5.80633341551878,2.65165726926301,0.996601765593721,0.559198337475902,0.075726193333184,0,0.289864488701678,0.860423876981386,4.75979933595425,4.31762553310254,1.94932925234301,1.79210754838934,1.68533304158102,0.340860645156116,0.519572009205738,0.70667914902068,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,1.82694207550496,0.776813650941515,0.890652834388949,0,0.304465478312141,0.230615497256059,0.452167921657868,0,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,2.63502717310392,0.41889341362691,0.510914110417183,0.239630249011841,1.79970819298022,0,2.69623150928681,4.11750542536764,0.251308704225729,3.12883776346098,0,1.24672826735736,0.324482526135515,0.101839363850316,0,1.76905930903572,0,0.390361328888111,0,0,0.60281927134286,0.272145996605311,0.2562274405697,0,0.258703370739016,0,0,0,0.43839146485515,0.278047249225598,0,0,0.199034266818493,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.329119699826961,0,0.0810688095458557,0.438599962275997,0.658650345873152,0.268412837520744,2.3131894342054,0.102904612379284,0.660837565967596,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0.494096864172033,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0.995706366271836,0.189667900953082,0.342745537829186,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0.889357881261447,0,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.162135226775035,0.549122826376163,1.43768206527355,0,0.312037673114561,0,0.358794827043824,0,0.554259570499814,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0.478364305972461,0.163863314715738,0.518054945597687,0.144649058581512,1.50791283939272,0.54390568381871,0,0,1.60550589987792,0.468846746368813,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0,1.75353514746787,0,1.28528526568723,0.567760340833074,0.534196811001766,0.162886959353576,0.164970122972535,3.98235415019888,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.720244376125241,0.258717367565509,0,0.177340233642274,0.535106452806212,0,0.304464949114599,0,0,0.661585194164886,0.65954501176592,0,0.180938774784468,0,0,0,1.8542530201051,1.19609616558497,0.206386867963223,0,0,0,0,0.169978429993855,0.559805809294632,0.138199973804424,0,0,0,0.108005340821801,0.418176592028937,0,0.269728692769641,0.247960367176008,0,0.129614973291793,3.10669656543463,0,0.149516546043979,0,0,0,0.168956125490778,0.234714477291508,0,0,0.483168241652012,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0,0.228620419965,0,0.487289403698762,0.192423683280659,0.116876902181569,0.680191150845634,0,0.269141569828427,0.335769232728157,0.579568782096571,0,0.183151624267265,0,1.50471631210609,2.82375921308533,0.460325236507177,0.572895513439397,1.54667864109319,3.42541259885321,4.5323633843382,1.35004500046361,3.15224842256954,0.906284817968409,2.07104124700728,0,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0,0,0.290692833264657,0,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0,0 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| ||
|short_description=p1@ENSMUST00000157343 | |short_description=p1@ENSMUST00000157343 | ||
}} | }} |
Latest revision as of 04:06, 6 August 2015
Short description: | p1@ENSMUST00000157343 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000157343_5end |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | 0bp_to_ENSMUST00000157343_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.13e-08 | 91 |
multi fate stem cell | 1.13e-08 | 91 |
stem cell | 1.07e-07 | 97 |
CNS neuron (sensu Vertebrata) | 2.35e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.35e-07 | 23 |
neuron of the substantia nigra | 4.47e-07 | 3 |
raphe nuclei neuron | 6.87e-07 | 3 |