FFCP PHASE1:Mm9::chr19:11155524..11155535,-: Difference between revisions
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|id=chr19:11155524..11155535,-
|short_description=p@chr19:11155524..11155535,-
|description=CAGE_peak_at_chr19:11155524..11155535,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:11155524..11155535,- | |||
|description=CAGE_peak_at_chr19:11155524..11155535,- | |||
|id=chr19:11155524..11155535,- | |||
|ontology_enrichment_celltype=CL:0002563!4.12e-13!9;CL:0002251!4.12e-13!9;CL:0000239!9.57e-10!6;CL:0000677!9.57e-10!6;CL:0000212!9.57e-10!6;CL:0000584!9.57e-10!6;CL:0000075!3.36e-08!7;CL:0002076!5.00e-07!15;CL:0000066!7.47e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.77e-16,9;CL:0002251,1.77e-16,9;CL:0000239,6.21e-15,6;CL:0000677,6.21e-15,6;CL:0000584,6.21e-15,6;CL:0000075,1.05e-12,7;CL:0000066,2.67e-10,25;CL:0002076,2.28e-09,15;CL:0000682,3.56e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.07e-28!59;UBERON:0000160!3.32e-23!43;UBERON:0000344!2.71e-22!15;UBERON:0001242!1.88e-19!13;UBERON:0000060!1.88e-19!13;UBERON:0001262!1.88e-19!13;UBERON:0004786!1.88e-19!13;UBERON:0003350!4.12e-13!9;UBERON:0004808!4.12e-13!9;UBERON:0001277!4.12e-13!9;UBERON:0004923!3.03e-12!24;UBERON:0000485!2.47e-10!11;UBERON:0001007!3.09e-10!128;UBERON:0001555!3.09e-10!128;UBERON:0007026!3.09e-10!128;UBERON:0004119!6.51e-10!130;UBERON:0000925!6.51e-10!130;UBERON:0006595!6.51e-10!130;UBERON:0004921!6.74e-09!126;UBERON:0004185!6.74e-09!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.58e-50,31;UBERON:0005409,7.54e-40,47;UBERON:0000344,2.95e-31,15;UBERON:0001242,1.23e-26,13;UBERON:0001262,1.23e-26,13;UBERON:0004786,1.23e-26,13;UBERON:0004923,2.48e-18,24;UBERON:0003350,1.77e-16,9;UBERON:0004808,1.77e-16,9;UBERON:0001277,1.77e-16,9;UBERON:0001007,6.36e-15,116;UBERON:0001555,6.36e-15,116;UBERON:0007026,6.36e-15,116;UBERON:0004119,1.47e-14,118;UBERON:0000925,1.47e-14,118;UBERON:0006595,1.47e-14,118;UBERON:0000485,3.02e-13,11;UBERON:0004921,9.21e-13,114;UBERON:0002108,1.11e-11,4;UBERON:0000331,1.50e-09,3;UBERON:0002116,1.50e-09,3;UBERON:0001204,1.50e-09,3;UBERON:0001168,1.50e-09,3 | |||
|phase1_expression=0,14.3079917132138,16.3799726180233,6.35174843744343,7.51343594919521,8.72972213941827,7.2419918584613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75953779039781,13.0763290208287,23.5435105287158,26.2764817657036,20.0388246397877,56.0569087396303,33.5200072580708,33.9247681302616,0,0,0,0.577703239502549,1.66234645358492,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,27.9587641827183,0,0,17.6265368093928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8601015832223,6.34681359992506,0,0,0,1.00841762311671,0.667134131534611,1.52180500890047,14.7104009078799,3.29397909448022,6.78605063760728,5.96869416123452,5.65395852645448,10.7858329038507,16.2103537406021,16.3295844068581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,7.28702091574627,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0.316335993581135,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.661227645802687,1.30877970992015,25.015689845316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.384150914429216,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.197008964751127,0.409231043169689,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,14.3079917132138,16.3799726180233,6.35174843744343,7.51343594919521,8.72972213941827,7.2419918584613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75953779039781,13.0763290208287,23.5435105287158,26.2764817657036,20.0388246397877,56.0569087396303,33.5200072580708,33.9247681302616,0,0,0,0.577703239502549,1.66234645358492,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,27.9587641827183,0,0,17.6265368093928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8601015832223,6.34681359992506,0,0,0,1.00841762311671,0.667134131534611,1.52180500890047,14.7104009078799,3.29397909448022,6.78605063760728,5.96869416123452,5.65395852645448,10.7858329038507,16.2103537406021,16.3295844068581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,7.28702091574627,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0.316335993581135,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.661227645802687,1.30877970992015,25.015689845316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.384150914429216,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.197008964751127,0.409231043169689,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr19:11155524..11155535,- | |||
}} | }} |
Latest revision as of 07:08, 6 August 2015
Short description: | p@chr19:11155524..11155535, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:11155524..11155535, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.77e-16 | 9 |
epithelial cell of alimentary canal | 1.77e-16 | 9 |
brush border epithelial cell | 6.21e-15 | 6 |
gut absorptive cell | 6.21e-15 | 6 |
enterocyte | 6.21e-15 | 6 |
columnar/cuboidal epithelial cell | 1.05e-12 | 7 |
epithelial cell | 2.67e-10 | 25 |
endo-epithelial cell | 2.28e-09 | 15 |
M cell of gut | 3.56e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.58e-50 | 31 |
gastrointestinal system | 7.54e-40 | 47 |
mucosa | 2.95e-31 | 15 |
intestinal mucosa | 1.23e-26 | 13 |
wall of intestine | 1.23e-26 | 13 |
gastrointestinal system mucosa | 1.23e-26 | 13 |
organ component layer | 2.48e-18 | 24 |
epithelium of mucosa | 1.77e-16 | 9 |
gastrointestinal system epithelium | 1.77e-16 | 9 |
intestinal epithelium | 1.77e-16 | 9 |
digestive system | 6.36e-15 | 116 |
digestive tract | 6.36e-15 | 116 |
primitive gut | 6.36e-15 | 116 |
endoderm-derived structure | 1.47e-14 | 118 |
endoderm | 1.47e-14 | 118 |
presumptive endoderm | 1.47e-14 | 118 |
simple columnar epithelium | 3.02e-13 | 11 |
subdivision of digestive tract | 9.21e-13 | 114 |
small intestine | 1.11e-11 | 4 |
ileal mucosa | 1.50e-09 | 3 |
ileum | 1.50e-09 | 3 |
mucosa of small intestine | 1.50e-09 | 3 |
wall of small intestine | 1.50e-09 | 3 |