FFCP PHASE1:Mm9::chr16:33787054..33787105,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:33787054..33787105,- to FFCP PHASE1:Mm9::chr16:33787054..33787105,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=92bp_to_ENSMUST00000148293,uc007zak.1_5end | |||
|cluster_id=chr16:33787054..33787105,- | |||
|description=CAGE_peak_1_at_ENSMUST00000148293_5end,CAGE_peak_1_at_uc007zak.1_5end | |||
|id=chr16:33787054..33787105,- | |||
|ontology_enrichment_celltype=CL:0002563!2.94e-11!9;CL:0002251!2.94e-11!9;CL:0000239!8.21e-09!6;CL:0000677!8.21e-09!6;CL:0000212!8.21e-09!6;CL:0000584!8.21e-09!6;CL:0000075!2.25e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.37e-12,9;CL:0002251,1.37e-12,9;CL:0000239,1.06e-11,6;CL:0000677,1.06e-11,6;CL:0000584,1.06e-11,6;CL:0000075,6.76e-10,7;CL:0000066,3.79e-07,25;CL:0002076,6.25e-07,15;CL:0000682,9.73e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.74e-28!43;UBERON:0005409!2.24e-24!59;UBERON:0000344!1.77e-17!15;UBERON:0001242!8.31e-16!13;UBERON:0000060!8.31e-16!13;UBERON:0001262!8.31e-16!13;UBERON:0004786!8.31e-16!13;UBERON:0003350!2.94e-11!9;UBERON:0004808!2.94e-11!9;UBERON:0001277!2.94e-11!9;UBERON:0004923!3.11e-09!24;UBERON:0000485!8.69e-09!11;UBERON:0001007!7.76e-07!128;UBERON:0001555!7.76e-07!128;UBERON:0007026!7.76e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.57e-47,31;UBERON:0005409,2.40e-35,47;UBERON:0001242,6.89e-19,13;UBERON:0001262,6.89e-19,13;UBERON:0004786,6.89e-19,13;UBERON:0000344,7.99e-19,15;UBERON:0003350,1.37e-12,9;UBERON:0004808,1.37e-12,9;UBERON:0001277,1.37e-12,9;UBERON:0004923,1.54e-10,24;UBERON:0001007,3.46e-10,116;UBERON:0001555,3.46e-10,116;UBERON:0007026,3.46e-10,116;UBERON:0000485,5.18e-10,11;UBERON:0004119,7.13e-10,118;UBERON:0000925,7.13e-10,118;UBERON:0006595,7.13e-10,118;UBERON:0004921,1.27e-09,114;UBERON:0002108,1.61e-07,4 | |||
|phase1_expression=0,9.42233600626275,5.0049916332849,11.1911758183527,9.5170188689806,2.85394762250213,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,0.45881856213434,6.89078356938024,6.03066794622705,6.46413698057667,4.56056206695297,1.26015064879965,3.76941868114018,0,0,0,1.44425809875637,1.82858109894342,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,3.72783522436244,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.6502539580558,5.28901133327089,0.213288250535234,1.16118335930219,4.12375876230699,16.3363654944907,17.5678654637448,14.2669219584419,9.01605216934572,6.0938613247884,8.79673230800943,4.77495532898762,7.01870713628832,8.08937467788799,8.42938394511308,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,2.48412283890143,0.836353184057875,1.52853794622324,0,0,0,4.53652406521275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,1.55572709461131,1.44224540067226,1.60459604795908,1.01078884705519,0.760437899670719,1.32038438970253,0.936415074698824,0.960377286073039,1.03383844120104,1.42888107384922,0.927074607558844,0.38581844092741,0,0.735994600671987,1.02860775715625,0.887379030796687,0,0.872078499793971,0.846984423737976,0.930760686808441,0.73171189149109,1.05227884575137,1.62964936615034,0,0.593175090620871,0.788035859004508,1.22769312950907,1.08455788830176,1.15743966588685,0,0.701794825336225,0,0,0,0 | |phase1_expression=0,9.42233600626275,5.0049916332849,11.1911758183527,9.5170188689806,2.85394762250213,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,0.45881856213434,6.89078356938024,6.03066794622705,6.46413698057667,4.56056206695297,1.26015064879965,3.76941868114018,0,0,0,1.44425809875637,1.82858109894342,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,3.72783522436244,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.6502539580558,5.28901133327089,0.213288250535234,1.16118335930219,4.12375876230699,16.3363654944907,17.5678654637448,14.2669219584419,9.01605216934572,6.0938613247884,8.79673230800943,4.77495532898762,7.01870713628832,8.08937467788799,8.42938394511308,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,2.48412283890143,0.836353184057875,1.52853794622324,0,0,0,4.53652406521275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,1.55572709461131,1.44224540067226,1.60459604795908,1.01078884705519,0.760437899670719,1.32038438970253,0.936415074698824,0.960377286073039,1.03383844120104,1.42888107384922,0.927074607558844,0.38581844092741,0,0.735994600671987,1.02860775715625,0.887379030796687,0,0.872078499793971,0.846984423737976,0.930760686808441,0.73171189149109,1.05227884575137,1.62964936615034,0,0.593175090620871,0.788035859004508,1.22769312950907,1.08455788830176,1.15743966588685,0,0.701794825336225,0,0,0,0 | ||
|short_description=p1@ENSMUST00000148293,p1@uc007zak.1 | |||
}} | }} |
Latest revision as of 08:23, 6 August 2015
Short description: | p1@ENSMUST00000148293, p1@uc007zak.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000148293_5end, CAGE_peak_1_at_uc007zak.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 92bp_to_ENSMUST00000148293, uc007zak.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.37e-12 | 9 |
epithelial cell of alimentary canal | 1.37e-12 | 9 |
brush border epithelial cell | 1.06e-11 | 6 |
gut absorptive cell | 1.06e-11 | 6 |
enterocyte | 1.06e-11 | 6 |
columnar/cuboidal epithelial cell | 6.76e-10 | 7 |
epithelial cell | 3.79e-07 | 25 |
endo-epithelial cell | 6.25e-07 | 15 |
M cell of gut | 9.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.57e-47 | 31 |
gastrointestinal system | 2.40e-35 | 47 |
intestinal mucosa | 6.89e-19 | 13 |
wall of intestine | 6.89e-19 | 13 |
gastrointestinal system mucosa | 6.89e-19 | 13 |
mucosa | 7.99e-19 | 15 |
epithelium of mucosa | 1.37e-12 | 9 |
gastrointestinal system epithelium | 1.37e-12 | 9 |
intestinal epithelium | 1.37e-12 | 9 |
organ component layer | 1.54e-10 | 24 |
digestive system | 3.46e-10 | 116 |
digestive tract | 3.46e-10 | 116 |
primitive gut | 3.46e-10 | 116 |
simple columnar epithelium | 5.18e-10 | 11 |
endoderm-derived structure | 7.13e-10 | 118 |
endoderm | 7.13e-10 | 118 |
presumptive endoderm | 7.13e-10 | 118 |
subdivision of digestive tract | 1.27e-09 | 114 |
small intestine | 1.61e-07 | 4 |