FFCP PHASE1:Hg19::chrX:48325857..48325903,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WUX1 | |||
|association_with_transcript=0bp_to_ENST00000376875,uc004djk.3_5end | |||
|cluster_id=chrX:48325857..48325903,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_SLC38A5_5end | |||
|id=chrX:48325857..48325903,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.42e-13;2!CL:0000558;1.42e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.42e-13,2;CL:0000765,1.42e-13,2;CL:0000050,1.42e-13,2;CL:0000038,1.42e-13,2;CL:0000558,1.42e-13,2;CL:0000547,1.42e-13,2;CL:0000549,1.42e-13,2;CL:0000550,1.42e-13,2;CL:0000552,1.42e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.60e-14;7!UBERON:0000358;1.61e-07;1!UBERON:0003124;2.21e-07;1!UBERON:0010226;3.51e-07;1!UBERON:0010115;3.51e-07;1!UBERON:0004140;3.51e-07;1!UBERON:0005425;3.51e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.18e-41!115;UBERON:0000178!7.60e-13!15;UBERON:0000179!7.60e-13!15;UBERON:0000463!7.60e-13!15;UBERON:0001049!2.91e-09!57;UBERON:0005068!2.91e-09!57;UBERON:0006241!2.91e-09!57;UBERON:0007135!2.91e-09!57;UBERON:0001017!1.56e-08!82;UBERON:0005743!2.07e-08!86;UBERON:0000073!7.23e-08!94;UBERON:0001016!7.23e-08!94;UBERON:0002346!1.72e-07!90;UBERON:0002020!2.01e-07!34;UBERON:0003528!2.01e-07!34;UBERON:0003075!4.65e-07!86;UBERON:0007284!4.65e-07!86;UBERON:0002616!5.51e-07!59;UBERON:0002791!8.74e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.12e-33;15!UBERON:0000179;3.12e-33;15!UBERON:0000463;3.12e-33;15!UBERON:0002390;5.71e-17;32!UBERON:0002193;1.59e-08;42!UBERON:0000996;1.83e-07;1!UBERON:0002363;3.51e-07;1!UBERON:0007029;3.51e-07;1!UBERON:0002084;3.51e-07;1!UBERON:0000941;3.51e-07;1!UBERON:0001785;3.51e-07;1!UBERON:0002464;3.51e-07;1!UBERON:0004904;3.51e-07;1!UBERON:0001021;3.51e-07;1!UBERON:0002082;3.51e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.13e-33,15;UBERON:0000179,3.13e-33,15;UBERON:0000463,3.13e-33,15;UBERON:0007023,1.43e-15,114;UBERON:0000996,1.83e-07,1;UBERON:0007029,2.83e-07,1;UBERON:0000941,3.01e-07,1;UBERON:0001785,3.01e-07,1;UBERON:0002464,3.01e-07,1;UBERON:0004904,3.01e-07,1;UBERON:0001021,3.01e-07,1;UBERON:0003902,3.01e-07,1;UBERON:0005425,3.01e-07,1;UBERON:0002084,3.40e-07,1;UBERON:0002082,3.40e-07,1;UBERON:0010226,3.40e-07,1;UBERON:0002363,4.09e-07,1;UBERON:0007645,4.09e-07,1;UBERON:0007647,4.09e-07,1;UBERON:0010115,4.09e-07,1 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0.32389366601898,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,26.96896482745,17.7776106696932,0,0,0,2.36994326789761,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0.929691098594572,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,3.01260162485693,0,0,0,0,1300.58822246205,1222.65489422066,811.177594536007,546.26546112471,510.089218626881,975.95233334504,1177.80856461633,923.990830382825,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.9924798825107,0,0,0,0,0.311039587661807,0,0,0,0.690503839458535,364.014300367348,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0,0.658156191461918,0,0,0.153900517007594,0,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0.332423363800313,0.902382642468723,1.56850027454192,0.503464760927528,0.37950746544837,0.158936578980379,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0.104421949505455,0.202203398942031,0,0,0,0,0,0,0,1.22429104652196,1.20054501294127,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0.146178634172371,0,0.193978032976839,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0.399358000997982,0.858452096273142,0.223171457441873,1.20930250476107,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,1.10154635083496,0,0,0,0,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,22.5261711150776,0.387848869084652,0.26446520348538,0,0,0.747511887973863,7.3886023396843,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0.122026264901963,0.1251909307065,1.14681839138014,0.110929051536852,0.310482014706917,0.276697269872462,0,0,0,0,0.936669811613763,0,0,0.233713309847224,0.554805861502613,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0.33946505990805,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0,1.42769420259154,0.0981477185010256,0,0,0,0,0,0.198916222116275,1.35378591028663,0,0.781514011233092,0,0,0,0,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,0,0,2.57236873471653,0,0,0.135939465953663,0.0657727735628491,0,0,0.470958557103084,0.157115589916002,0,0.913158720509496,0,0,0.78624198594322,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0.307988420568741,3.4794432940146,1.45713297917742,0,0,0,0,0.219881033490858,0,0,0,0,0.245148321753905,0,0.588925401344836,0.297046400327086,0.4226557275834,0.169927114687817,0.469919589899268,5.41446258978048,0,0,0,0,0.730336388246517,0,0.573358332605805,0,0.203974470572744,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0.18378979906969,0,0.378893491091197,0,0,0,0.426467963801962,0.476128862927481,0,0.372448285775147,0,0.190941474834495,0.202117188958219,0.217716747896961,0.342233301085281,0.134704106029175,0,2.66128285236811,0,0,0,0,4.69281884806909,0.488965776731466,0.406896178315738,3.32878387092756,0.805095174364105,0 | |||
|short_description=p1@SLC38A5 | |||
}} |
Latest revision as of 17:57, 15 September 2015
Short description: | p1@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC38A5_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000376875, uc004djk.3_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | Q8WUX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.42e-13 | 2 |
erythroblast | 1.42e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 1.42e-13 | 2 |
erythroid progenitor cell | 1.42e-13 | 2 |
reticulocyte | 1.42e-13 | 2 |
proerythroblast | 1.42e-13 | 2 |
basophilic erythroblast | 1.42e-13 | 2 |
polychromatophilic erythroblast | 1.42e-13 | 2 |
orthochromatic erythroblast | 1.42e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.13e-33 | 15 |
haemolymphatic fluid | 3.13e-33 | 15 |
organism substance | 3.13e-33 | 15 |
adult organism | 1.43e-15 | 114 |
vagina | 1.83e-07 | 1 |
surface | 2.83e-07 | 1 |
cranial nerve II | 3.01e-07 | 1 |
cranial nerve | 3.01e-07 | 1 |
nerve trunk | 3.01e-07 | 1 |
nerve connecting eye with brain | 3.01e-07 | 1 |
nerve | 3.01e-07 | 1 |
retinal neural layer | 3.01e-07 | 1 |
presumptive neural retina | 3.01e-07 | 1 |
heart left ventricle | 3.40e-07 | 1 |
cardiac ventricle | 3.40e-07 | 1 |
future cardiac ventricle | 3.40e-07 | 1 |
dura mater | 4.09e-07 | 1 |
future meninx | 4.09e-07 | 1 |
ectomeninx | 4.09e-07 | 1 |
future dura mater | 4.09e-07 | 1 |