FFCP PHASE1:Hg19::chr1:22181125..22181132,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3339 | |EntrezGene=3339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5273 | |HGNC=5273 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000493940_5end | |association_with_transcript=16bp_to_ENST00000493940_5end | ||
|cluster_id=chr1:22181125..22181132,- | |||
|coexpression_cluster_id=C547 | |||
|description=CAGE_peak_15_at_HSPG2_5end | |description=CAGE_peak_15_at_HSPG2_5end | ||
|id=chr1:22181125..22181132,- | |id=chr1:22181125..22181132,- | ||
|ontology_enrichment_celltype=CL:0000213!2.28e-11!57;CL:0000215!2.28e-11!57;CL:0000222!7.40e-11!119;CL:0002078!7.69e-11!44;CL:0000115!7.78e-10!35;CL:0000071!8.17e-07!18;CL:0002546!8.17e-07!18;CL:0000666!9.73e-07!4;CL:0002188!9.73e-07!4 | |ontology_enrichment_celltype=CL:0000213!2.28e-11!57;CL:0000215!2.28e-11!57;CL:0000222!7.40e-11!119;CL:0002078!7.69e-11!44;CL:0000115!7.78e-10!35;CL:0000071!8.17e-07!18;CL:0002546!8.17e-07!18;CL:0000666!9.73e-07!4;CL:0002188!9.73e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000115;3.16e-19;36!CL:0000071;1.13e-16;18!CL:0002078;6.52e-15;45!CL:0002262;3.61e-14;2!CL:1000398;3.61e-14;2!CL:0002593;3.06e-13;2!CL:0002188;1.63e-12;5!CL:0002139;2.74e-12;24!CL:0002595;1.30e-11;5!CL:0000213;8.29e-11;58!CL:0000215;8.29e-11;58!CL:0002144;1.92e-09;3!CL:0002615;2.43e-09;3!CL:1000746;4.54e-09;7!CL:1000612;4.54e-09;7!CL:0002581;8.55e-08;1!CL:0000511;1.85e-07;1!CL:0002625;1.85e-07;1!CL:0000216;1.85e-07;1!CL:1000413;4.50e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.06e-23,36;CL:0002078,9.77e-22,45;CL:0000213,5.32e-19,58;CL:0000215,5.32e-19,58;CL:0000071,8.81e-17,18;CL:0002546,8.81e-17,18;CL:0002262,3.28e-14,2;CL:1000398,3.28e-14,2;CL:0000222,2.46e-13,121;CL:0002593,5.06e-13,2;CL:0002188,1.74e-12,5;CL:0002139,2.28e-12,24;CL:0002595,1.53e-11,5;CL:0002144,1.23e-09,3;CL:0002615,2.23e-09,3;CL:1000746,4.73e-09,7;CL:1000612,4.73e-09,7;CL:0002581,7.26e-08,1;CL:0000511,1.15e-07,1;CL:0002625,1.15e-07,1;CL:0000216,1.15e-07,1;CL:1000413,4.55e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.13e-16;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.91e-12!84;UBERON:0003914!1.79e-11!118;UBERON:0001981!2.72e-11!60;UBERON:0007500!2.72e-11!60;UBERON:0004537!2.72e-11!60;UBERON:0006965!2.72e-11!60;UBERON:0000055!1.43e-10!69;UBERON:0002049!1.74e-09!79;UBERON:0007798!1.74e-09!79;UBERON:0001009!3.44e-09!113;UBERON:0003513!3.60e-09!8;UBERON:0000353!1.75e-08!17;UBERON:0004535!1.93e-08!110;UBERON:0006914!1.54e-07!25;UBERON:0001986!8.17e-07!18;UBERON:0004638!8.17e-07!18;UBERON:0004852!8.17e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;2.33e-22;7!UBERON:0006914;3.99e-19;25!UBERON:0000487;1.98e-17;22!UBERON:0004638;1.13e-16;18!UBERON:0001986;1.13e-16;18!UBERON:0004852;1.13e-16;18!UBERON:0001281;3.61e-14;2!UBERON:0003497;3.61e-14;2!UBERON:0003909;3.61e-14;2!UBERON:0003835;3.61e-14;2!UBERON:0002456;3.06e-13;2!UBERON:0003834;1.30e-11;5!UBERON:0001533;1.30e-11;5!UBERON:0000490;4.36e-11;33!UBERON:0003914;7.85e-11;74!UBERON:0000353;7.93e-11;15!UBERON:0001280;9.73e-10;3!UBERON:0004647;9.73e-10;3!UBERON:0010523;1.92e-09;3!UBERON:0001915;1.92e-09;3!UBERON:0001982;1.92e-09;3!UBERON:0000074;4.54e-09;7!UBERON:0001229;4.54e-09;7!UBERON:0007500;8.07e-09;56!UBERON:0001981;8.07e-09;56!UBERON:0004537;8.07e-09;56!UBERON:0000055;9.02e-08;65!UBERON:0001637;1.09e-07;42!UBERON:0003509;1.09e-07;42!UBERON:0004572;1.09e-07;42!UBERON:0001136;1.85e-07;1!UBERON:0001343;1.85e-07;1!UBERON:0004910;1.85e-07;1!UBERON:0004813;1.85e-07;1!UBERON:0003915;4.50e-07;9!UBERON:0004700;4.50e-07;9!UBERON:0001917;4.50e-07;9!UBERON:0002049;4.64e-07;75!UBERON:0007798;4.64e-07;75!UBERON:0004457;9.16e-07;9!UBERON:0000042;9.16e-07;9!UBERON:0000025;9.85e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,2.67e-22,7;UBERON:0006914,2.60e-19,25;UBERON:0007500,2.78e-18,59;UBERON:0001981,2.78e-18,59;UBERON:0004537,2.78e-18,59;UBERON:0006965,2.78e-18,59;UBERON:0000487,1.33e-17,22;UBERON:0004638,8.81e-17,18;UBERON:0001986,8.81e-17,18;UBERON:0004852,8.81e-17,18;UBERON:0004872,3.27e-16,83;UBERON:0000055,1.72e-15,68;UBERON:0001281,3.28e-14,2;UBERON:0003497,3.28e-14,2;UBERON:0003909,3.28e-14,2;UBERON:0003835,3.28e-14,2;UBERON:0003914,6.60e-14,117;UBERON:0002049,3.81e-13,78;UBERON:0007798,3.81e-13,78;UBERON:0002456,5.06e-13,2;UBERON:0000058,6.77e-12,19;UBERON:0003834,1.53e-11,5;UBERON:0001533,1.53e-11,5;UBERON:0000353,7.95e-11,15;UBERON:0003081,1.50e-10,203;UBERON:0004535,5.17e-10,109;UBERON:0001280,9.14e-10,3;UBERON:0004647,9.14e-10,3;UBERON:0005171,9.14e-10,3;UBERON:0004876,1.09e-09,11;UBERON:0001009,1.15e-09,112;UBERON:0010523,1.23e-09,3;UBERON:0001915,1.23e-09,3;UBERON:0001982,1.23e-09,3;UBERON:0010532,4.73e-09,7;UBERON:0000074,4.73e-09,7;UBERON:0001229,4.73e-09,7;UBERON:0001230,4.73e-09,7;UBERON:0003220,4.73e-09,7;UBERON:0005749,4.73e-09,7;UBERON:0004199,4.73e-09,7;UBERON:0004209,4.73e-09,7;UBERON:0004198,4.73e-09,7;UBERON:0001637,1.95e-08,42;UBERON:0003509,1.95e-08,42;UBERON:0004572,1.95e-08,42;UBERON:0000025,5.64e-08,192;UBERON:0005103,5.67e-08,8;UBERON:0000083,5.67e-08,8;UBERON:0009201,5.67e-08,8;UBERON:0006553,5.67e-08,8;UBERON:0003074,5.67e-08,8;UBERON:0003060,5.67e-08,8;UBERON:0001136,1.15e-07,1;UBERON:0001343,1.15e-07,1;UBERON:0004910,1.15e-07,1;UBERON:0005154,1.15e-07,1;UBERON:0005295,1.15e-07,1;UBERON:0004813,1.15e-07,1;UBERON:0005297,1.15e-07,1;UBERON:0005294,1.15e-07,1;UBERON:0010141,1.15e-07,1;UBERON:0005891,1.15e-07,1;UBERON:0000926,1.37e-07,315;UBERON:0004120,1.37e-07,315;UBERON:0006603,1.37e-07,315;UBERON:0000080,3.93e-07,9;UBERON:0002120,3.93e-07,9;UBERON:0004875,3.93e-07,9;UBERON:0005721,3.93e-07,9;UBERON:0005754,3.93e-07,9;UBERON:0007297,3.93e-07,9;UBERON:0003915,4.55e-07,9;UBERON:0004700,4.55e-07,9;UBERON:0001917,4.55e-07,9 | |||
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|short_description=p15@HSPG2 | |short_description=p15@HSPG2 | ||
}} | }} |
Latest revision as of 18:41, 15 September 2015
Short description: | p15@HSPG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_HSPG2_5end |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | 16bp_to_ENST00000493940_5end |
EntrezGene: | HSPG2 |
HGNC: | 5273 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.06e-23 | 36 |
meso-epithelial cell | 9.77e-22 | 45 |
lining cell | 5.32e-19 | 58 |
barrier cell | 5.32e-19 | 58 |
blood vessel endothelial cell | 8.81e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.81e-17 | 18 |
endothelial cell of sinusoid | 3.28e-14 | 2 |
endothelial cell of hepatic sinusoid | 3.28e-14 | 2 |
mesodermal cell | 2.46e-13 | 121 |
smooth muscle cell of the internal thoracic artery | 5.06e-13 | 2 |
glomerular endothelial cell | 1.74e-12 | 5 |
endothelial cell of vascular tree | 2.28e-12 | 24 |
smooth muscle cell of the subclavian artery | 1.53e-11 | 5 |
capillary endothelial cell | 1.23e-09 | 3 |
adipocyte of omentum tissue | 2.23e-09 | 3 |
glomerular cell | 4.73e-09 | 7 |
kidney corpuscule cell | 4.73e-09 | 7 |
perirenal preadipocyte | 7.26e-08 | 1 |
androgen binding protein secreting cell | 1.15e-07 | 1 |
seminiferous tubule epithelial cell | 1.15e-07 | 1 |
Sertoli cell | 1.15e-07 | 1 |
endothelial cell of artery | 4.55e-07 | 9 |