FFCP PHASE1:Hg19::chr7:116451100..116451116,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=830 | |EntrezGene=830 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1490 | |HGNC=1490 | ||
|TSSclassifier=strong | |||
|UniProt=C9J7V0 | |UniProt=C9J7V0 | ||
|association_with_transcript=-7bp_to_ENST00000464223,ENST00000484325,uc003vik.1_5end | |association_with_transcript=-7bp_to_ENST00000464223,ENST00000484325,uc003vik.1_5end | ||
|cluster_id=chr7:116451100..116451116,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_7_at_CAPZA2_5end | |description=CAGE_peak_7_at_CAPZA2_5end | ||
|id=chr7:116451100..116451116,+ | |id=chr7:116451100..116451116,+ | ||
|ontology_enrichment_celltype=CL:0000181!9.81e-25!12;CL:0000417!9.81e-25!12;CL:0000668!9.81e-25!12;CL:0000414!9.81e-25!12;CL:0000412!9.81e-25!12;CL:0000182!9.81e-25!12;CL:0000223!3.88e-15!59;CL:0002563!1.75e-12!4;CL:0002253!4.42e-07!2 | |ontology_enrichment_celltype=CL:0000181!9.81e-25!12;CL:0000417!9.81e-25!12;CL:0000668!9.81e-25!12;CL:0000414!9.81e-25!12;CL:0000412!9.81e-25!12;CL:0000182!9.81e-25!12;CL:0000223!3.88e-15!59;CL:0002563!1.75e-12!4;CL:0002253!4.42e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.12e-33;12!CL:0002231;1.53e-09;3!CL:0002178;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.03e-33,12;CL:0000223,1.74e-15,58;CL:0002231,1.41e-09,3;CL:0002178,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.81e-21;11!UBERON:0009497;6.25e-18;13!CL:0000223;2.98e-12;58!UBERON:0001041;3.69e-08;30!UBERON:0003104;9.17e-08;31 | |||
|ontology_enrichment_disease=DOID:3493!3.93e-07!2 | |ontology_enrichment_disease=DOID:3493!3.93e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:7;9.78e-07;39 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.80e-22!19;UBERON:0006925!3.80e-22!19;UBERON:0008836!3.80e-22!19;UBERON:0008835!4.32e-19!22;UBERON:0003894!4.32e-19!22;UBERON:0009854!3.01e-18!23;UBERON:0007499!9.14e-17!25;UBERON:0009497!9.14e-17!25;UBERON:0000015!9.14e-17!25;UBERON:0002423!9.14e-17!25;UBERON:0006235!9.14e-17!25;UBERON:0004161!9.14e-17!25;UBERON:0003929!1.28e-16!54;UBERON:0005057!4.15e-16!26;UBERON:0009856!4.15e-16!26;UBERON:0002365!1.85e-13!31;UBERON:0002330!1.85e-13!31;UBERON:0001242!1.75e-12!4;UBERON:0001262!1.75e-12!4;UBERON:0004786!1.75e-12!4;UBERON:0004808!1.75e-12!4;UBERON:0001277!1.75e-12!4;UBERON:0000949!2.68e-12!45;UBERON:0002368!7.00e-12!35;UBERON:0005911!1.40e-10!82;UBERON:0003350!3.59e-10!5;UBERON:0004921!1.63e-09!129;UBERON:0004185!1.63e-09!129;UBERON:0002530!2.93e-09!59;UBERON:0000077!8.32e-08!130;UBERON:0001007!1.12e-07!155;UBERON:0001555!1.12e-07!155;UBERON:0007026!1.12e-07!155;UBERON:0005172!2.02e-07!55;UBERON:0005173!2.02e-07!55;UBERON:0004119!6.45e-07!169;UBERON:0000925!6.45e-07!169;UBERON:0006595!6.45e-07!169;UBERON:0001041!7.19e-07!98 | |ontology_enrichment_uberon=UBERON:0002107!3.80e-22!19;UBERON:0006925!3.80e-22!19;UBERON:0008836!3.80e-22!19;UBERON:0008835!4.32e-19!22;UBERON:0003894!4.32e-19!22;UBERON:0009854!3.01e-18!23;UBERON:0007499!9.14e-17!25;UBERON:0009497!9.14e-17!25;UBERON:0000015!9.14e-17!25;UBERON:0002423!9.14e-17!25;UBERON:0006235!9.14e-17!25;UBERON:0004161!9.14e-17!25;UBERON:0003929!1.28e-16!54;UBERON:0005057!4.15e-16!26;UBERON:0009856!4.15e-16!26;UBERON:0002365!1.85e-13!31;UBERON:0002330!1.85e-13!31;UBERON:0001242!1.75e-12!4;UBERON:0001262!1.75e-12!4;UBERON:0004786!1.75e-12!4;UBERON:0004808!1.75e-12!4;UBERON:0001277!1.75e-12!4;UBERON:0000949!2.68e-12!45;UBERON:0002368!7.00e-12!35;UBERON:0005911!1.40e-10!82;UBERON:0003350!3.59e-10!5;UBERON:0004921!1.63e-09!129;UBERON:0004185!1.63e-09!129;UBERON:0002530!2.93e-09!59;UBERON:0000077!8.32e-08!130;UBERON:0001007!1.12e-07!155;UBERON:0001555!1.12e-07!155;UBERON:0007026!1.12e-07!155;UBERON:0005172!2.02e-07!55;UBERON:0005173!2.02e-07!55;UBERON:0004119!6.45e-07!169;UBERON:0000925!6.45e-07!169;UBERON:0006595!6.45e-07!169;UBERON:0001041!7.19e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.51e-21;19!UBERON:0006925;2.51e-21;19!UBERON:0002423;2.43e-16;25!UBERON:0002365;1.36e-12;31!UBERON:0002330;1.36e-12;31!UBERON:0002368;5.02e-12;33!UBERON:0002530;1.46e-09;57!UBERON:0000949;2.43e-09;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.45e-21,19;UBERON:0006925,2.45e-21,19;UBERON:0008836,2.45e-21,19;UBERON:0008835,1.66e-18,22;UBERON:0003894,1.66e-18,22;UBERON:0009854,1.00e-17,23;UBERON:0007499,2.38e-16,25;UBERON:0009497,2.38e-16,25;UBERON:0000015,2.38e-16,25;UBERON:0002423,2.38e-16,25;UBERON:0006235,2.38e-16,25;UBERON:0004161,2.38e-16,25;UBERON:0009856,9.69e-16,26;UBERON:0002365,2.79e-13,31;UBERON:0002330,2.79e-13,31;UBERON:0002368,8.13e-12,35;UBERON:0003929,9.42e-12,54;UBERON:0002530,8.91e-11,59;UBERON:0000949,2.77e-09,45;UBERON:0005911,8.31e-08,82;UBERON:0005172,8.46e-08,54;UBERON:0005173,8.46e-08,54;UBERON:0004921,1.39e-07,118;UBERON:0001041,2.36e-07,87;UBERON:0002417,4.71e-07,60;UBERON:0000916,4.71e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29681375438695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28471228690949,1.81314888438566,3.5723878242718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29681375438695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28471228690949,1.81314888438566,3.5723878242718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@CAPZA2 | |short_description=p7@CAPZA2 | ||
}} | }} |
Latest revision as of 18:44, 15 September 2015
Short description: | p7@CAPZA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CAPZA2_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -7bp_to_ENST00000464223, ENST00000484325, uc003vik.1_5end |
EntrezGene: | CAPZA2 |
HGNC: | 1490 |
UniProt: | C9J7V0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.03e-33 | 12 |
endodermal cell | 1.74e-15 | 58 |
epithelial cell of prostate | 1.41e-09 | 3 |
epithelial cell of stomach | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.45e-21 | 19 |
digestive gland | 2.45e-21 | 19 |
liver bud | 2.45e-21 | 19 |
hepatic diverticulum | 1.66e-18 | 22 |
liver primordium | 1.66e-18 | 22 |
digestive tract diverticulum | 1.00e-17 | 23 |
epithelial sac | 2.38e-16 | 25 |
epithelium of foregut-midgut junction | 2.38e-16 | 25 |
anatomical boundary | 2.38e-16 | 25 |
hepatobiliary system | 2.38e-16 | 25 |
foregut-midgut junction | 2.38e-16 | 25 |
septum transversum | 2.38e-16 | 25 |
sac | 9.69e-16 | 26 |
exocrine gland | 2.79e-13 | 31 |
exocrine system | 2.79e-13 | 31 |
endocrine gland | 8.13e-12 | 35 |
gut epithelium | 9.42e-12 | 54 |
gland | 8.91e-11 | 59 |
endocrine system | 2.77e-09 | 45 |
endo-epithelium | 8.31e-08 | 82 |
abdomen element | 8.46e-08 | 54 |
abdominal segment element | 8.46e-08 | 54 |
subdivision of digestive tract | 1.39e-07 | 118 |
foregut | 2.36e-07 | 87 |
abdominal segment of trunk | 4.71e-07 | 60 |
abdomen | 4.71e-07 | 60 |