FFCP PHASE1:Hg19::chr11:118023585..118023592,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:118023585..118023592,- to FFCP PHASE1:Hg19::chr11:118023585..118023592,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6330 | |EntrezGene=6330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10592 | |HGNC=10592 | ||
|TSSclassifier=strong | |||
|UniProt=E9PPT5 | |UniProt=E9PPT5 | ||
|association_with_transcript=10bp_to_ENST00000529878_5end | |||
|cluster_id=chr11:118023585..118023592,- | |||
|coexpression_cluster_id=C3089 | |||
|description=CAGE_peak_7_at_SCN4B_5end | |||
|id=chr11:118023585..118023592,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;4.87e-23;2!CL:1000448;4.87e-23;2!CL:0002308;4.87e-23;2!CL:0002140;4.87e-23;2!CL:0000622;8.48e-10;5!CL:0000154;2.61e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,4.89e-23,2;CL:1000448,4.89e-23,2;CL:0002308,4.89e-23,2;CL:0002140,4.89e-23,2;CL:0000622,8.49e-10,5;CL:0000154,2.61e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006222;7.43e-13;1!UBERON:0010122;4.68e-07;2!UBERON:0006601;6.92e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.97e-51!57;UBERON:0005068!2.97e-51!57;UBERON:0006241!2.97e-51!57;UBERON:0007135!2.97e-51!57;UBERON:0001017!7.91e-46!82;UBERON:0005743!2.31e-45!86;UBERON:0003075!9.61e-44!86;UBERON:0007284!9.61e-44!86;UBERON:0002346!2.93e-43!90;UBERON:0002616!6.05e-41!59;UBERON:0000073!7.38e-40!94;UBERON:0001016!7.38e-40!94;UBERON:0007023!4.44e-39!115;UBERON:0000955!5.09e-37!69;UBERON:0006238!5.09e-37!69;UBERON:0002780!1.54e-33!41;UBERON:0001890!1.54e-33!41;UBERON:0006240!1.54e-33!41;UBERON:0002020!1.27e-32!34;UBERON:0003528!1.27e-32!34;UBERON:0003080!1.45e-32!42;UBERON:0001893!1.67e-32!34;UBERON:0001869!3.56e-32!32;UBERON:0002791!1.61e-30!33;UBERON:0000924!1.77e-28!173;UBERON:0006601!1.77e-28!173;UBERON:0004121!3.15e-28!169;UBERON:0000153!1.26e-25!129;UBERON:0007811!1.26e-25!129;UBERON:0003056!2.38e-25!61;UBERON:0000033!3.62e-22!123;UBERON:0001950!5.45e-22!20;UBERON:0003076!4.98e-20!15;UBERON:0003057!4.98e-20!15;UBERON:0002619!1.05e-19!22;UBERON:0000956!2.30e-19!25;UBERON:0000203!2.30e-19!25;UBERON:0002308!7.57e-16!9;UBERON:0000125!7.57e-16!9;UBERON:0000200!2.05e-14!6;UBERON:0004733!2.50e-14!12;UBERON:0002028!2.50e-14!12;UBERON:0007277!2.50e-14!12;UBERON:0000025!1.95e-13!194;UBERON:0000119!2.78e-13!312;UBERON:0000064!4.04e-13!219;UBERON:0004732!4.51e-13!13;UBERON:0000483!8.13e-13!309;UBERON:0002420!5.51e-12!9;UBERON:0007245!5.51e-12!9;UBERON:0010009!5.51e-12!9;UBERON:0010011!5.51e-12!9;UBERON:0000454!5.51e-12!9;UBERON:0009663!5.80e-12!7;UBERON:0002680!8.83e-12!9;UBERON:0001895!8.83e-12!9;UBERON:0010092!8.83e-12!9;UBERON:0004111!5.46e-11!241;UBERON:0000475!3.52e-10!365;UBERON:0000369!4.70e-10!4;UBERON:0002435!4.70e-10!4;UBERON:0000204!4.70e-10!4;UBERON:0010082!4.70e-10!4;UBERON:0000477!4.71e-10!286;UBERON:0001872!2.09e-08!5;UBERON:0000481!2.75e-08!347;UBERON:0000988!6.13e-08!3;UBERON:0005383!8.64e-08!3;UBERON:0005382!8.64e-08!3;UBERON:0002240!1.01e-07!3;UBERON:0002771!1.06e-07!3;UBERON:0002298!1.88e-07!8;UBERON:0001871!5.21e-07!7;UBERON:0000062!7.01e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;9.10e-31;9!UBERON:0002308;9.10e-31;9!UBERON:0000369;9.66e-26;4!UBERON:0002435;9.66e-26;4!UBERON:0000204;9.66e-26;4!UBERON:0009663;1.05e-25;7!UBERON:0001869;1.74e-23;32!UBERON:0002419;4.87e-23;2!UBERON:0007771;4.87e-23;2!UBERON:0003297;4.87e-23;2!UBERON:0001821;4.87e-23;2!UBERON:0003487;4.87e-23;2!UBERON:0001820;4.87e-23;2!UBERON:0003528;5.83e-23;34!UBERON:0002020;5.83e-23;34!UBERON:0001893;1.65e-22;34!UBERON:0001872;1.79e-20;5!UBERON:0002791;2.92e-20;32!UBERON:0002420;4.51e-20;9!UBERON:0007245;4.51e-20;9!UBERON:0010009;4.51e-20;9!UBERON:0010011;4.51e-20;9!UBERON:0000454;4.51e-20;9!UBERON:0000073;3.19e-18;53!UBERON:0002616;3.19e-18;53!UBERON:0002298;3.59e-17;6!UBERON:0002780;3.86e-17;41!UBERON:0001890;3.86e-17;41!UBERON:0005383;5.37e-16;3!UBERON:0005382;5.37e-16;3!UBERON:0000988;1.05e-15;3!UBERON:0004733;5.49e-15;12!UBERON:0002028;5.49e-15;12!UBERON:0004732;7.43e-14;13!UBERON:0000955;8.76e-14;68!UBERON:0001017;1.44e-12;75!UBERON:0002581;2.07e-12;1!UBERON:0002902;2.07e-12;1!UBERON:0001882;2.07e-12;1!UBERON:0001874;2.07e-12;1!UBERON:0009899;2.07e-12;1!UBERON:0007190;2.07e-12;1!UBERON:0005403;2.07e-12;1!UBERON:0002680;1.19e-11;9!UBERON:0001895;1.19e-11;9!UBERON:0001016;1.90e-10;83!UBERON:0001950;1.16e-08;20!UBERON:0000200;2.61e-08;6!UBERON:0002619;6.35e-08;22!UBERON:0007023;2.23e-07;114!UBERON:0001873;4.68e-07;2!UBERON:0000956;5.00e-07;25!UBERON:0000203;5.00e-07;25!UBERON:0002148;7.82e-07;2!UBERON:0001875;7.82e-07;2!UBERON:0006331;7.82e-07;2!UBERON:0009662;7.82e-07;2!UBERON:0006514;7.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.17e-38,53;UBERON:0002616,3.17e-38,53;UBERON:0001049,4.04e-36,56;UBERON:0005068,4.04e-36,56;UBERON:0006241,4.04e-36,56;UBERON:0007135,4.04e-36,56;UBERON:0000125,1.07e-30,9;UBERON:0002308,1.07e-30,9;UBERON:0000955,4.45e-29,68;UBERON:0006238,4.45e-29,68;UBERON:0001869,5.22e-26,32;UBERON:0000369,1.54e-25,4;UBERON:0002435,1.54e-25,4;UBERON:0000204,1.54e-25,4;UBERON:0010082,1.54e-25,4;UBERON:0009663,1.64e-25,7;UBERON:0002780,4.37e-25,41;UBERON:0001890,4.37e-25,41;UBERON:0003080,4.37e-25,41;UBERON:0006240,4.37e-25,41;UBERON:0010371,6.73e-25,104;UBERON:0003528,1.68e-24,34;UBERON:0002020,1.68e-24,34;UBERON:0001893,1.83e-24,34;UBERON:0001017,3.10e-24,81;UBERON:0003075,3.10e-24,82;UBERON:0007284,3.10e-24,82;UBERON:0002419,4.89e-23,2;UBERON:0007771,4.89e-23,2;UBERON:0003297,4.89e-23,2;UBERON:0001821,4.89e-23,2;UBERON:0003487,4.89e-23,2;UBERON:0001820,4.89e-23,2;UBERON:0005089,4.89e-23,2;UBERON:0005088,4.89e-23,2;UBERON:0002346,4.92e-23,86;UBERON:0001016,1.11e-21,89;UBERON:0002791,1.46e-20,32;UBERON:0001872,2.13e-20,5;UBERON:0002420,6.38e-20,9;UBERON:0007245,6.38e-20,9;UBERON:0010009,6.38e-20,9;UBERON:0010011,6.38e-20,9;UBERON:0000454,6.38e-20,9;UBERON:0002298,2.25e-17,6;UBERON:0007023,3.97e-17,114;UBERON:0003056,1.38e-16,61;UBERON:0000988,4.30e-16,3;UBERON:0005383,8.44e-16,3;UBERON:0005382,8.44e-16,3;UBERON:0004733,4.76e-15,12;UBERON:0002028,4.76e-15,12;UBERON:0007277,4.76e-15,12;UBERON:0010314,2.12e-14,132;UBERON:0004121,3.45e-14,171;UBERON:0000924,3.45e-14,171;UBERON:0006601,3.45e-14,171;UBERON:0004732,6.51e-14,13;UBERON:0002902,9.92e-13,1;UBERON:0009899,9.92e-13,1;UBERON:0002581,1.11e-12,1;UBERON:0007190,1.75e-12,1;UBERON:0001882,1.96e-12,1;UBERON:0005403,1.96e-12,1;UBERON:0001874,3.85e-12,1;UBERON:0003076,4.32e-12,15;UBERON:0003057,4.32e-12,15;UBERON:0002680,9.09e-12,9;UBERON:0001895,9.09e-12,9;UBERON:0010092,9.09e-12,9;UBERON:0000025,2.71e-09,192;UBERON:0011216,6.87e-09,223;UBERON:0001950,1.07e-08,20;UBERON:0000200,2.02e-08,6;UBERON:0002619,5.91e-08,22;UBERON:0000956,4.69e-07,25;UBERON:0000203,4.69e-07,25;UBERON:0000483,4.74e-07,306;UBERON:0001873,4.83e-07,2;UBERON:0010122,4.83e-07,2;UBERON:0004111,5.03e-07,240;UBERON:0000119,5.86e-07,309;UBERON:0002148,6.07e-07,2;UBERON:0006331,6.07e-07,2;UBERON:0009662,6.07e-07,2;UBERON:0001875,8.52e-07,2;UBERON:0006514,8.52e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,1.37897349296586,0,0,2.65722415744152,0.120596438625408,0,1.10579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,2.81117334870407,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.566560457600628,0,0,1.42211251997706,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0.886068179966986,0.366078794705889,0.500763722825999,0,0.554645257684261,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22035527683273,0,0.319267718114302,0.615349092722265,0,1.59061680667701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2832141077495,0.781078098613847,1.03343398250592,1.20490039368423,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,1.97112225632812,1.51277379194553,0,0,0.078493092850514,1.09980912941201,0,0,0,0,0.357382720883282,0.158013611732727,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,1.37897349296586,0,0,2.65722415744152,0.120596438625408,0,1.10579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,2.81117334870407,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.566560457600628,0,0,1.42211251997706,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0.886068179966986,0.366078794705889,0.500763722825999,0,0.554645257684261,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22035527683273,0,0.319267718114302,0.615349092722265,0,1.59061680667701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2832141077495,0.781078098613847,1.03343398250592,1.20490039368423,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,1.97112225632812,1.51277379194553,0,0,0.078493092850514,1.09980912941201,0,0,0,0,0.357382720883282,0.158013611732727,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p7@SCN4B | |||
}} | }} |
Latest revision as of 23:12, 15 September 2015
Short description: | p7@SCN4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SCN4B_5end |
Coexpression cluster: | C3089_caudate_pons_diencephalon_locus_parietal_globus_paracentral |
Association with transcript: | 10bp_to_ENST00000529878_5end |
EntrezGene: | SCN4B |
HGNC: | 10592 |
UniProt: | E9PPT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 4.89e-23 | 2 |
epithelial cell of sweat gland | 4.89e-23 | 2 |
epithelial cell of skin gland | 4.89e-23 | 2 |
acinar cell of sebaceous gland | 4.89e-23 | 2 |
acinar cell | 8.49e-10 | 5 |
protein secreting cell | 2.61e-08 | 6 |