FFCP PHASE1:Hg19::chr11:118023689..118023705,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6330 | |EntrezGene=6330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10592 | |HGNC=10592 | ||
|TSSclassifier=strong | |||
|UniProt=E9PPT5,Q8IWT1,B0YJ93 | |UniProt=E9PPT5,Q8IWT1,B0YJ93 | ||
|association_with_transcript=-59bp_to_NM_001142348,NM_174934,uc001pse.2,uc010rxv.1_5end | |association_with_transcript=-59bp_to_NM_001142348,NM_174934,uc001pse.2,uc010rxv.1_5end | ||
|cluster_id=chr11:118023689..118023705,- | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_4_at_SCN4B_5end | |description=CAGE_peak_4_at_SCN4B_5end | ||
|id=chr11:118023689..118023705,- | |id=chr11:118023689..118023705,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.26e-18;2!UBERON:0006601;8.10e-12;82!UBERON:0006222;4.86e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.81e-54!57;UBERON:0005068!3.81e-54!57;UBERON:0006241!3.81e-54!57;UBERON:0007135!3.81e-54!57;UBERON:0002616!7.48e-46!59;UBERON:0000955!1.53e-44!69;UBERON:0006238!1.53e-44!69;UBERON:0001017!6.27e-43!82;UBERON:0005743!1.10e-42!86;UBERON:0002780!1.87e-39!41;UBERON:0001890!1.87e-39!41;UBERON:0006240!1.87e-39!41;UBERON:0003075!8.75e-39!86;UBERON:0007284!8.75e-39!86;UBERON:0003080!2.39e-38!42;UBERON:0002020!2.67e-38!34;UBERON:0003528!2.67e-38!34;UBERON:0001893!6.68e-38!34;UBERON:0000073!1.35e-37!94;UBERON:0001016!1.35e-37!94;UBERON:0001869!1.80e-37!32;UBERON:0002346!1.44e-36!90;UBERON:0002791!1.20e-35!33;UBERON:0007023!9.87e-35!115;UBERON:0000153!1.08e-33!129;UBERON:0007811!1.08e-33!129;UBERON:0000033!7.43e-31!123;UBERON:0003056!2.75e-28!61;UBERON:0004121!8.57e-27!169;UBERON:0000924!7.15e-26!173;UBERON:0006601!7.15e-26!173;UBERON:0000956!4.93e-22!25;UBERON:0000203!4.93e-22!25;UBERON:0002619!1.17e-19!22;UBERON:0002308!2.51e-19!9;UBERON:0000125!2.51e-19!9;UBERON:0001950!5.49e-19!20;UBERON:0003076!1.96e-16!15;UBERON:0003057!1.96e-16!15;UBERON:0009663!1.62e-14!7;UBERON:0004733!1.64e-13!12;UBERON:0002028!1.64e-13!12;UBERON:0007277!1.64e-13!12;UBERON:0004732!2.40e-12!13;UBERON:0002298!3.52e-12!8;UBERON:0000369!4.51e-12!4;UBERON:0002435!4.51e-12!4;UBERON:0000204!4.51e-12!4;UBERON:0010082!4.51e-12!4;UBERON:0000200!1.94e-11!6;UBERON:0002420!4.39e-11!9;UBERON:0007245!4.39e-11!9;UBERON:0010009!4.39e-11!9;UBERON:0010011!4.39e-11!9;UBERON:0000454!4.39e-11!9;UBERON:0000475!1.61e-10!365;UBERON:0000025!2.60e-10!194;UBERON:0000064!7.84e-10!219;UBERON:0000483!1.52e-09!309;UBERON:0005383!1.74e-09!3;UBERON:0005382!1.74e-09!3;UBERON:0000119!2.46e-09!312;UBERON:0001872!2.83e-09!5;UBERON:0000988!3.91e-09!3;UBERON:0001896!4.24e-09!3;UBERON:0005290!4.24e-09!3;UBERON:0010096!4.24e-09!3;UBERON:0002771!8.62e-09!3;UBERON:0004111!3.44e-08!241;UBERON:0000477!1.95e-07!286;UBERON:0002680!2.13e-07!9;UBERON:0001895!2.13e-07!9;UBERON:0010092!2.13e-07!9;UBERON:0001873!7.40e-07!2;UBERON:0010122!7.40e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!3.81e-54!57;UBERON:0005068!3.81e-54!57;UBERON:0006241!3.81e-54!57;UBERON:0007135!3.81e-54!57;UBERON:0002616!7.48e-46!59;UBERON:0000955!1.53e-44!69;UBERON:0006238!1.53e-44!69;UBERON:0001017!6.27e-43!82;UBERON:0005743!1.10e-42!86;UBERON:0002780!1.87e-39!41;UBERON:0001890!1.87e-39!41;UBERON:0006240!1.87e-39!41;UBERON:0003075!8.75e-39!86;UBERON:0007284!8.75e-39!86;UBERON:0003080!2.39e-38!42;UBERON:0002020!2.67e-38!34;UBERON:0003528!2.67e-38!34;UBERON:0001893!6.68e-38!34;UBERON:0000073!1.35e-37!94;UBERON:0001016!1.35e-37!94;UBERON:0001869!1.80e-37!32;UBERON:0002346!1.44e-36!90;UBERON:0002791!1.20e-35!33;UBERON:0007023!9.87e-35!115;UBERON:0000153!1.08e-33!129;UBERON:0007811!1.08e-33!129;UBERON:0000033!7.43e-31!123;UBERON:0003056!2.75e-28!61;UBERON:0004121!8.57e-27!169;UBERON:0000924!7.15e-26!173;UBERON:0006601!7.15e-26!173;UBERON:0000956!4.93e-22!25;UBERON:0000203!4.93e-22!25;UBERON:0002619!1.17e-19!22;UBERON:0002308!2.51e-19!9;UBERON:0000125!2.51e-19!9;UBERON:0001950!5.49e-19!20;UBERON:0003076!1.96e-16!15;UBERON:0003057!1.96e-16!15;UBERON:0009663!1.62e-14!7;UBERON:0004733!1.64e-13!12;UBERON:0002028!1.64e-13!12;UBERON:0007277!1.64e-13!12;UBERON:0004732!2.40e-12!13;UBERON:0002298!3.52e-12!8;UBERON:0000369!4.51e-12!4;UBERON:0002435!4.51e-12!4;UBERON:0000204!4.51e-12!4;UBERON:0010082!4.51e-12!4;UBERON:0000200!1.94e-11!6;UBERON:0002420!4.39e-11!9;UBERON:0007245!4.39e-11!9;UBERON:0010009!4.39e-11!9;UBERON:0010011!4.39e-11!9;UBERON:0000454!4.39e-11!9;UBERON:0000475!1.61e-10!365;UBERON:0000025!2.60e-10!194;UBERON:0000064!7.84e-10!219;UBERON:0000483!1.52e-09!309;UBERON:0005383!1.74e-09!3;UBERON:0005382!1.74e-09!3;UBERON:0000119!2.46e-09!312;UBERON:0001872!2.83e-09!5;UBERON:0000988!3.91e-09!3;UBERON:0001896!4.24e-09!3;UBERON:0005290!4.24e-09!3;UBERON:0010096!4.24e-09!3;UBERON:0002771!8.62e-09!3;UBERON:0004111!3.44e-08!241;UBERON:0000477!1.95e-07!286;UBERON:0002680!2.13e-07!9;UBERON:0001895!2.13e-07!9;UBERON:0010092!2.13e-07!9;UBERON:0001873!7.40e-07!2;UBERON:0010122!7.40e-07!2 | ||
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| ||
|short_description=p4@SCN4B | |short_description=p4@SCN4B | ||
}} | }} |
Latest revision as of 23:15, 15 September 2015
Short description: | p4@SCN4B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCN4B_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -59bp_to_NM_001142348, NM_174934, uc001pse.2, uc010rxv.1_5end |
EntrezGene: | SCN4B |
HGNC: | 10592 |
UniProt: | E9PPT5Q8IWT1B0YJ93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data