FFCP PHASE1:Hg19::chr4:149363662..149363688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4306 | |EntrezGene=4306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7979 | |HGNC=7979 | ||
|TSSclassifier=strong | |||
|UniProt=B0ZBF7,P08235,F5GZH0,B0ZBF6,B0ZBF5,Q2NKL1 | |UniProt=B0ZBF7,P08235,F5GZH0,B0ZBF6,B0ZBF5,Q2NKL1 | ||
|association_with_transcript=0bp_to_ENST00000355292,ENST00000358102,ENST00000544252,NM_000901,NM_001166104_5end | |association_with_transcript=0bp_to_ENST00000355292,ENST00000358102,ENST00000544252,NM_000901,NM_001166104_5end | ||
|cluster_id=chr4:149363662..149363688,- | |||
|coexpression_cluster_id=C652 | |coexpression_cluster_id=C652 | ||
|description=CAGE_peak_6_at_NR3C2_5end | |description=CAGE_peak_6_at_NR3C2_5end | ||
|id=chr4:149363662..149363688,- | |id=chr4:149363662..149363688,- | ||
|ontology_enrichment_celltype=CL:0000791!5.64e-09!18;CL:0000789!5.64e-09!18;CL:0002420!5.64e-09!18;CL:0002419!5.64e-09!18;CL:0000790!5.64e-09!18;CL:0000838!4.76e-08!52;CL:0000084!8.06e-08!25;CL:0000827!8.06e-08!25;CL:0000542!1.10e-07!53;CL:0000051!1.10e-07!53 | |ontology_enrichment_celltype=CL:0000791!5.64e-09!18;CL:0000789!5.64e-09!18;CL:0002420!5.64e-09!18;CL:0002419!5.64e-09!18;CL:0000790!5.64e-09!18;CL:0000838!4.76e-08!52;CL:0000084!8.06e-08!25;CL:0000827!8.06e-08!25;CL:0000542!1.10e-07!53;CL:0000051!1.10e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.41e-09;18!CL:0000789;2.41e-09;18!CL:0002419;2.41e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.12e-09,18;CL:0000789,1.12e-09,18;CL:0002420,1.12e-09,18;CL:0002419,1.12e-09,18;CL:0000790,1.12e-09,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.37e-16;82!CL:0000790;2.41e-09;18!UBERON:0006215;1.76e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.09e-54!115;UBERON:0001049!4.19e-29!57;UBERON:0005068!4.19e-29!57;UBERON:0006241!4.19e-29!57;UBERON:0007135!4.19e-29!57;UBERON:0003080!1.52e-23!42;UBERON:0002616!4.12e-23!59;UBERON:0002780!6.72e-23!41;UBERON:0001890!6.72e-23!41;UBERON:0006240!6.72e-23!41;UBERON:0002346!1.02e-20!90;UBERON:0000955!1.61e-20!69;UBERON:0006238!1.61e-20!69;UBERON:0003075!3.95e-20!86;UBERON:0007284!3.95e-20!86;UBERON:0001017!1.19e-18!82;UBERON:0005743!1.70e-18!86;UBERON:0001893!4.85e-18!34;UBERON:0002020!8.27e-18!34;UBERON:0003528!8.27e-18!34;UBERON:0002791!3.07e-17!33;UBERON:0001869!1.05e-16!32;UBERON:0000073!1.05e-16!94;UBERON:0001016!1.05e-16!94;UBERON:0003056!6.00e-15!61;UBERON:0002619!1.69e-13!22;UBERON:0001950!4.53e-12!20;UBERON:0000153!7.34e-12!129;UBERON:0007811!7.34e-12!129;UBERON:0000956!1.18e-11!25;UBERON:0000203!1.18e-11!25;UBERON:0000033!1.97e-10!123;UBERON:0002420!3.59e-08!9;UBERON:0007245!3.59e-08!9;UBERON:0010009!3.59e-08!9;UBERON:0010011!3.59e-08!9;UBERON:0000454!3.59e-08!9;UBERON:0002308!5.94e-08!9;UBERON:0000125!5.94e-08!9;UBERON:0000924!1.01e-07!173;UBERON:0006601!1.01e-07!173;UBERON:0004121!2.99e-07!169;UBERON:0003076!7.61e-07!15;UBERON:0003057!7.61e-07!15;UBERON:0002298!9.86e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!6.09e-54!115;UBERON:0001049!4.19e-29!57;UBERON:0005068!4.19e-29!57;UBERON:0006241!4.19e-29!57;UBERON:0007135!4.19e-29!57;UBERON:0003080!1.52e-23!42;UBERON:0002616!4.12e-23!59;UBERON:0002780!6.72e-23!41;UBERON:0001890!6.72e-23!41;UBERON:0006240!6.72e-23!41;UBERON:0002346!1.02e-20!90;UBERON:0000955!1.61e-20!69;UBERON:0006238!1.61e-20!69;UBERON:0003075!3.95e-20!86;UBERON:0007284!3.95e-20!86;UBERON:0001017!1.19e-18!82;UBERON:0005743!1.70e-18!86;UBERON:0001893!4.85e-18!34;UBERON:0002020!8.27e-18!34;UBERON:0003528!8.27e-18!34;UBERON:0002791!3.07e-17!33;UBERON:0001869!1.05e-16!32;UBERON:0000073!1.05e-16!94;UBERON:0001016!1.05e-16!94;UBERON:0003056!6.00e-15!61;UBERON:0002619!1.69e-13!22;UBERON:0001950!4.53e-12!20;UBERON:0000153!7.34e-12!129;UBERON:0007811!7.34e-12!129;UBERON:0000956!1.18e-11!25;UBERON:0000203!1.18e-11!25;UBERON:0000033!1.97e-10!123;UBERON:0002420!3.59e-08!9;UBERON:0007245!3.59e-08!9;UBERON:0010009!3.59e-08!9;UBERON:0010011!3.59e-08!9;UBERON:0000454!3.59e-08!9;UBERON:0002308!5.94e-08!9;UBERON:0000125!5.94e-08!9;UBERON:0000924!1.01e-07!173;UBERON:0006601!1.01e-07!173;UBERON:0004121!2.99e-07!169;UBERON:0003076!7.61e-07!15;UBERON:0003057!7.61e-07!15;UBERON:0002298!9.86e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.84e-36;34!UBERON:0000073;6.23e-35;53!UBERON:0002616;6.23e-35;53!UBERON:0002780;1.12e-34;41!UBERON:0001890;1.12e-34;41!UBERON:0003528;5.27e-34;34!UBERON:0002020;5.27e-34;34!UBERON:0001869;1.17e-33;32!UBERON:0002791;2.40e-33;32!UBERON:0002619;1.53e-31;22!UBERON:0001950;5.26e-28;20!UBERON:0000956;3.10e-27;25!UBERON:0000203;3.10e-27;25!UBERON:0000955;1.62e-23;68!UBERON:0001017;3.40e-22;75!UBERON:0001016;5.08e-17;83!UBERON:0007023;6.92e-17;114!UBERON:0002420;3.02e-15;9!UBERON:0000125;3.02e-15;9!UBERON:0007245;3.02e-15;9!UBERON:0002308;3.02e-15;9!UBERON:0010009;3.02e-15;9!UBERON:0010011;3.02e-15;9!UBERON:0000454;3.02e-15;9!UBERON:0004732;3.95e-15;13!UBERON:0000200;1.00e-13;6!UBERON:0004733;1.42e-13;12!UBERON:0002028;1.42e-13;12!UBERON:0002298;4.84e-12;6!UBERON:0009663;1.04e-11;7!UBERON:0000349;9.21e-11;5!UBERON:0000369;2.82e-10;4!UBERON:0002435;2.82e-10;4!UBERON:0000204;2.82e-10;4!UBERON:0003296;4.89e-10;4!UBERON:0010133;4.89e-10;4!UBERON:0002680;8.94e-09;9!UBERON:0001895;8.94e-09;9!UBERON:0001894;2.07e-08;7!UBERON:0005383;2.53e-08;3!UBERON:0005382;2.53e-08;3!UBERON:0002021;4.08e-08;5!UBERON:0001871;6.20e-08;6!UBERON:0001872;6.89e-08;5!UBERON:0001870;1.84e-07;3!UBERON:0011216;6.67e-07;132!UBERON:0000988;7.66e-07;3!UBERON:0001896;7.66e-07;3!UBERON:0005290;7.66e-07;3 | |||
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| ||
|short_description=p6@NR3C2 | |short_description=p6@NR3C2 | ||
}} | }} |
Latest revision as of 00:48, 16 September 2015
Short description: | p6@NR3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NR3C2_5end |
Coexpression cluster: | C652_cerebellum_occipital_pineal_pituitary_medial_parietal_amygdala |
Association with transcript: | 0bp_to_ENST00000355292, ENST00000358102, ENST00000544252, NM_000901, NM_001166104_5end |
EntrezGene: | NR3C2 |
HGNC: | 7979 |
UniProt: | B0ZBF7P08235F5GZH0B0ZBF6B0ZBF5Q2NKL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.12e-09 | 18 |
alpha-beta T cell | 1.12e-09 | 18 |
immature T cell | 1.12e-09 | 18 |
mature T cell | 1.12e-09 | 18 |
immature alpha-beta T cell | 1.12e-09 | 18 |