FFCP PHASE1:Hg19::chrX:55020645..55020666,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:55020645..55020666,-
|short_description=p2@PFKFB1
|description=CAGE_peak_2_at_PFKFB1_5end
|association_with_transcript=-134bp_to_ENST00000374992,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5207 | |EntrezGene=5207 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8872 | |HGNC=8872 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VBA9,P16118 | |UniProt=Q4VBA9,P16118 | ||
|association_with_transcript=-134bp_to_ENST00000374992,ENST00000375006,NM_002625,uc004dty.1,uc010nkd.1_5end | |||
|cluster_id=chrX:55020645..55020666,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_PFKFB1_5end | |||
|id=chrX:55020645..55020666,- | |||
|ontology_enrichment_celltype=CL:0000181!3.11e-24!12;CL:0000417!3.11e-24!12;CL:0000668!3.11e-24!12;CL:0000414!3.11e-24!12;CL:0000412!3.11e-24!12;CL:0000182!3.11e-24!12;CL:0000136!3.40e-13!15;CL:0002127!4.50e-09!1;CL:0000914!4.50e-09!1;CL:0000911!4.50e-09!1;CL:0000814!4.50e-09!1;CL:0002042!4.50e-09!1;CL:0002039!4.50e-09!1;CL:0002040!4.50e-09!1;CL:0002041!4.50e-09!1;CL:0000223!9.87e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.79e-41;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.79e-41,12;CL:0000223,1.08e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.55e-29;11!UBERON:0009497;1.70e-24;13!UBERON:0001041;7.33e-11;30!UBERON:0003104;1.98e-10;31!CL:0000223;5.50e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.51e-29!26;UBERON:0002107!1.22e-26!19;UBERON:0006925!1.22e-26!19;UBERON:0008836!1.22e-26!19;UBERON:0008835!7.22e-23!22;UBERON:0003894!7.22e-23!22;UBERON:0009854!7.90e-22!23;UBERON:0007499!5.33e-20!25;UBERON:0009497!5.33e-20!25;UBERON:0000015!5.33e-20!25;UBERON:0002423!5.33e-20!25;UBERON:0006235!5.33e-20!25;UBERON:0004161!5.33e-20!25;UBERON:0009856!3.43e-19!26;UBERON:0002368!1.47e-17!35;UBERON:0002365!6.33e-16!31;UBERON:0002330!6.33e-16!31;UBERON:0003929!1.95e-13!54;UBERON:0000949!2.33e-13!45;UBERON:0002417!1.04e-11!61;UBERON:0000916!1.04e-11!61;UBERON:0005172!1.14e-10!55;UBERON:0005173!1.14e-10!55;UBERON:0002530!7.20e-10!59;UBERON:0000989!2.35e-09!1;UBERON:0008811!2.35e-09!1;UBERON:0006258!2.35e-09!1;UBERON:0005876!2.35e-09!1;UBERON:0004874!2.35e-09!1;UBERON:0005911!2.66e-08!82;UBERON:0004921!3.83e-08!129;UBERON:0004185!3.83e-08!129;UBERON:0001041!3.86e-08!98;UBERON:0006562!5.93e-07!11;UBERON:0009569!8.10e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.43e-50;19!UBERON:0006925;1.43e-50;19!UBERON:0002423;1.90e-38;25!UBERON:0002365;1.51e-29;31!UBERON:0002330;1.51e-29;31!UBERON:0002368;3.63e-27;33!UBERON:0000949;2.93e-19;43!UBERON:0005172;1.66e-12;52!UBERON:0005173;1.66e-12;52!UBERON:0002417;4.28e-10;58!UBERON:0000916;4.28e-10;58!UBERON:0002530;6.40e-10;57!UBERON:0001007;2.26e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.43e-50,19;UBERON:0006925,1.43e-50,19;UBERON:0008836,1.43e-50,19;UBERON:0008835,1.10e-43,22;UBERON:0003894,1.10e-43,22;UBERON:0009854,8.70e-42,23;UBERON:0007499,1.90e-38,25;UBERON:0009497,1.90e-38,25;UBERON:0000015,1.90e-38,25;UBERON:0002423,1.90e-38,25;UBERON:0006235,1.90e-38,25;UBERON:0004161,1.90e-38,25;UBERON:0009856,5.72e-37,26;UBERON:0002365,5.25e-31,31;UBERON:0002330,5.25e-31,31;UBERON:0002368,1.85e-27,35;UBERON:0000949,2.44e-21,45;UBERON:0003929,9.21e-18,54;UBERON:0005172,9.21e-18,54;UBERON:0005173,9.21e-18,54;UBERON:0002530,3.04e-16,59;UBERON:0002417,5.71e-16,60;UBERON:0000916,5.71e-16,60;UBERON:0005911,1.25e-11,82;UBERON:0001041,6.03e-11,87;UBERON:0005177,2.17e-09,101;UBERON:0009569,1.94e-08,112;UBERON:0003914,4.60e-08,117;UBERON:0004921,6.37e-08,118;UBERON:0005256,1.02e-07,122 | |||
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|short_description=p2@PFKFB1 | |||
}} | }} |
Latest revision as of 01:31, 16 September 2015
Short description: | p2@PFKFB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PFKFB1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -134bp_to_ENST00000374992, ENST00000375006, NM_002625, uc004dty.1, uc010nkd.1_5end |
EntrezGene: | PFKFB1 |
HGNC: | 8872 |
UniProt: | Q4VBA9P16118 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.79e-41 | 12 |
endodermal cell | 1.08e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.43e-50 | 19 |
digestive gland | 1.43e-50 | 19 |
liver bud | 1.43e-50 | 19 |
hepatic diverticulum | 1.10e-43 | 22 |
liver primordium | 1.10e-43 | 22 |
digestive tract diverticulum | 8.70e-42 | 23 |
epithelial sac | 1.90e-38 | 25 |
epithelium of foregut-midgut junction | 1.90e-38 | 25 |
anatomical boundary | 1.90e-38 | 25 |
hepatobiliary system | 1.90e-38 | 25 |
foregut-midgut junction | 1.90e-38 | 25 |
septum transversum | 1.90e-38 | 25 |
sac | 5.72e-37 | 26 |
exocrine gland | 5.25e-31 | 31 |
exocrine system | 5.25e-31 | 31 |
endocrine gland | 1.85e-27 | 35 |
endocrine system | 2.44e-21 | 45 |
gut epithelium | 9.21e-18 | 54 |
abdomen element | 9.21e-18 | 54 |
abdominal segment element | 9.21e-18 | 54 |
gland | 3.04e-16 | 59 |
abdominal segment of trunk | 5.71e-16 | 60 |
abdomen | 5.71e-16 | 60 |
endo-epithelium | 1.25e-11 | 82 |
foregut | 6.03e-11 | 87 |
trunk region element | 2.17e-09 | 101 |
subdivision of trunk | 1.94e-08 | 112 |
epithelial tube | 4.60e-08 | 117 |
subdivision of digestive tract | 6.37e-08 | 118 |
trunk mesenchyme | 1.02e-07 | 122 |