FFCP PHASE1:Hg19::chr9:134152371..134152402,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:134152371..134152402,- to FFCP PHASE1:Hg19::chr9:134152371..134152402,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286336 | |EntrezGene=286336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25465 | |HGNC=25465 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JUQ0 | |UniProt=Q5JUQ0 | ||
|association_with_transcript=-437bp_to_ENST00000372271_5end | |||
|cluster_id=chr9:134152371..134152402,- | |||
|coexpression_cluster_id=C2938 | |||
|description=CAGE_peak_2_at_FAM78A_5end | |||
|id=chr9:134152371..134152402,- | |||
|ontology_enrichment_celltype=CL:0000037!1.11e-57!172;CL:0000566!1.11e-57!172;CL:0000988!1.13e-56!182;CL:0002032!2.63e-54!165;CL:0000837!2.63e-54!165;CL:0002087!8.02e-42!119;CL:0000738!1.02e-39!140;CL:0002031!5.65e-36!124;CL:0000763!8.27e-31!112;CL:0000049!8.27e-31!112;CL:0000542!6.09e-21!53;CL:0000051!6.09e-21!53;CL:0000838!1.26e-20!52;CL:0000766!7.72e-19!76;CL:0002194!5.32e-18!63;CL:0000576!5.32e-18!63;CL:0000040!5.32e-18!63;CL:0000559!5.32e-18!63;CL:0002009!7.71e-17!65;CL:0000839!1.47e-16!70;CL:0000084!7.63e-16!25;CL:0000827!7.63e-16!25;CL:0000557!2.32e-15!71;CL:0000791!7.24e-14!18;CL:0000789!7.24e-14!18;CL:0002420!7.24e-14!18;CL:0002419!7.24e-14!18;CL:0000790!7.24e-14!18;CL:0002057!3.53e-11!42;CL:0000860!3.76e-10!45;CL:0000625!2.54e-09!11;CL:0000134!6.86e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.51e-20;18!CL:0000789;3.51e-20;18!CL:0002419;3.51e-20;18!CL:0000084;1.91e-17;25!CL:0000625;2.60e-13;11!CL:0000763;1.82e-10;100!CL:0000542;2.31e-10;53!CL:0000988;3.24e-10;177!CL:0002087;4.31e-08;104!CL:0000235;4.60e-08;6!CL:0000738;5.77e-08;136!CL:0000624;9.40e-08;6!CL:0002393;8.74e-07;6!CL:0002397;8.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.17e-60,168;CL:0000988,1.84e-59,177;CL:0002032,1.65e-56,161;CL:0000837,1.65e-56,161;CL:0002087,3.93e-38,115;CL:0000738,6.24e-37,136;CL:0000763,2.32e-34,108;CL:0000049,2.32e-34,108;CL:0002031,3.14e-33,120;CL:0000791,3.35e-20,18;CL:0000789,3.35e-20,18;CL:0002420,3.35e-20,18;CL:0002419,3.35e-20,18;CL:0000790,3.35e-20,18;CL:0000838,7.11e-20,52;CL:0000542,2.82e-19,53;CL:0000051,2.82e-19,53;CL:0000084,2.21e-17,25;CL:0000827,2.21e-17,25;CL:0000766,5.49e-17,72;CL:0002194,1.23e-15,59;CL:0000576,1.23e-15,59;CL:0000040,1.23e-15,59;CL:0000559,1.23e-15,59;CL:0002009,9.04e-15,61;CL:0000839,1.39e-14,66;CL:0000557,1.44e-13,67;CL:0000625,2.59e-13,11;CL:0000134,1.66e-12,354;CL:0002320,1.04e-11,361;CL:0000219,2.43e-09,386;CL:0000473,5.20e-09,48;CL:0000234,5.20e-09,48;CL:0002393,1.05e-08,9;CL:0002397,1.05e-08,9;CL:0000235,4.91e-08,6;CL:0000624,8.87e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;3.51e-20;18!CL:0000049;7.34e-11;108!CL:0000051;2.31e-10;53 | |||
|ontology_enrichment_disease=DOID:1240!1.83e-18!39;DOID:8692!1.02e-16!31;DOID:2531!1.51e-15!51;DOID:0060083!1.51e-15!51;DOID:1036!7.98e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.31e-23;31!DOID:1240;2.48e-17;39!DOID:2531;1.03e-10;51!DOID:0060083;1.03e-10;51!DOID:1036;6.53e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.94e-24,31;DOID:1240,9.23e-23,39;DOID:2531,5.28e-17,51;DOID:0060083,5.28e-17,51;DOID:1036,1.52e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.85e-21!102;UBERON:0003061!9.85e-21!102;UBERON:0002193!1.07e-18!112;UBERON:0007023!3.92e-14!115;UBERON:0002371!3.10e-12!80;UBERON:0001474!1.25e-10!86;UBERON:0002405!2.23e-09!115;UBERON:0000178!9.03e-09!15;UBERON:0000179!9.03e-09!15;UBERON:0000463!9.03e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.14e-11;15!UBERON:0000179;2.14e-11;15!UBERON:0000463;2.14e-11;15!UBERON:0002390;8.13e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.79e-22,98;UBERON:0003061,1.79e-22,98;UBERON:0002193,1.27e-20,108;UBERON:0002405,6.95e-13,93;UBERON:0002371,1.99e-11,76;UBERON:0000178,1.99e-11,15;UBERON:0000179,1.99e-11,15;UBERON:0000463,1.99e-11,15;UBERON:0002384,1.22e-10,371;UBERON:0001474,7.87e-10,82;UBERON:0003081,1.41e-08,203;UBERON:0004765,4.46e-08,90 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,2.95562122019805,2.59745578335141,4.32700704533794,3.83829398097213,5.26374819274658,0,0,0,0.232401601740905,1.27952309238679,1.46800219667424,2.21598163412751,2.20598892217156,5.20826089718044,4.47830948479849,3.56283032620878,5.6666624879521,4.07115068582781,2.64513160582167,5.09426528494414,0.464858073811369,0.822335776043652,0,0.28769239232215,1.5369642391746,1.18241114944293,0.344745680736619,1.93645405075148,0,0.941211697713023,0.272906150057846,0.224723484445085,0,0.962787081228281,0.639337125799041,0.989553900560148,0.797854630486527,0.852449501065388,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,1.0429658368404,1.08594422352558,0,0,0.316462387440884,2.95757400836718,5.31510749912609,2.51590374610051,4.6054738770063,4.8056605709282,3.37523732063868,2.28010194992999,1.9891667719909,2.19196984517561,0,0.546138611262131,2.66852776159066,0.853460445133014,1.60158394814405,2.87376219977242,2.64417949113945,2.86216126360609,0,0.587237189370939,0.764546456250458,1.32171328579026,0,2.89722493252585,3.93419540227666,5.89516144123747,4.31763147898969,6.8546463110178,5.21475626613745,4.2610302516126,9.74133642039557,8.57860518015837,5.59751224202191,3.76607620792156,5.41607727530031,11.0158534964081,11.8354006279489,12.168404940672,9.39590060471884,5.506258628966,6.82118190545478,6.95606153033254,6.27213142829861,5.66546713487831,3.06576394881537,7.90343124610049,4.04831507231205,5.09704662918555,4.55758417699493,5.70271226669025,3.46322773878877,4.8634912238679,3.74792179657038,5.20909954496837,3.28451198768419,7.86266298576456,5.61624411145365,8.68946423296794,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,6.81549526674835,4.87563264437948,4.91944453919801,5.96226560763355,0.571994910780128,2.60020250930695,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0,0,0,0,0,0,0,2.85759130509055,2.2452937262617,1.46394924628319,3.06633274931766,0.949265659568129,1.09921046358244,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67812311566055,6.31811515875942,6.39113997841531,0,0,0,0,0,0,0,0.088048434013226,0,0,0,1.26995788584338,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,5.52482800575339,4.21667878966063,0,0,0,0,0,0,2.57795831185113,8.47232268868287,5.17506179662842,5.64709359630893,0,0,0,0,0,1.49801404789436,5.9832291840805,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,6.6165768359324,7.33428282783297,8.00456683525833,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,3.4120015221269,1.02056223165909,1.51141141271498,7.71136263451447,0,0,0,0,0,2.19259876645935,1.0457418040996,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,1.06838442776085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,0.764637207142375,2.84823593587081,5.71756261098694,6.17043409629291,0,2.70015718619057,3.17250070517708,0,0,0,0.929015875628594,0,0.924843963529383,0.797131363644112,2.99369057149225,1.91505370132367,0.635020748171649,1.94773164164733,1.96558024679421,5.02116293873023,6.58055562246698,0,3.21654377823046,6.42352300414798,5.04499267977619,1.27753871307098,1.03051603426729,4.91585222893533,3.80249383417107,5.8397199599168,3.71237381263877,1.9488432172667,3.69262196843137,2.97501246323581,5.32915148796512,0,0,0.879049075631364,0,2.78608460693696,0,0.23874448473769,0,0,0,0.140669416410513,0,0.988823245360557,0,0.597743964753209,1.38141957765574,0,0,1.6001024709939,0,0,0,4.60415133204185,0.394573622547734,4.7896618469388,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0.874813840149763,0,0,0.241192877250816,0,0,0.591095237907095,0.658156191461918,0,0,0.0769502585037971,0,3.91958637459702,2.15418346583453,2.17294743844016,0.957003479195758,1.64875668123352,0.533034776018635,1.02193298195737,6.12222999940597,2.6593869104025,9.70061340653877,8.23462644134506,7.55197141391292,2.08729105996604,2.06617552674492,0,0,0,0,1.99052386215701,0.176915129006678,0,1.77912677208373,2.71840665682306,2.40170483862547,0.471807930864739,0,0.937057782901357,0,0,0,0.394584402849391,0,0,1.39010475182674,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.0967563312890851,0,0,0.193978032976839,0,0.90392296312213,0,0,0.379864775735272,0.782205530939212,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,1.36905378891993,5.10986352267889,0,2.36598618851383,0.837847203816763,0.916641696046735,0,0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| ||
|short_description=p2@FAM78A | |||
}} | }} |
Latest revision as of 02:25, 16 September 2015
Short description: | p2@FAM78A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM78A_5end |
Coexpression cluster: | C2938_CD4_Peripheral_CD8_Natural_acute_chronic_Renal |
Association with transcript: | -437bp_to_ENST00000372271_5end |
EntrezGene: | FAM78A |
HGNC: | 25465 |
UniProt: | Q5JUQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.79e-22 | 98 |
blood island | 1.79e-22 | 98 |
hemolymphoid system | 1.27e-20 | 108 |
immune system | 6.95e-13 | 93 |
bone marrow | 1.99e-11 | 76 |
blood | 1.99e-11 | 15 |
haemolymphatic fluid | 1.99e-11 | 15 |
organism substance | 1.99e-11 | 15 |
connective tissue | 1.22e-10 | 371 |
bone element | 7.87e-10 | 82 |
lateral plate mesoderm | 1.41e-08 | 203 |
skeletal element | 4.46e-08 | 90 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.94e-24 | 31 |
leukemia | 9.23e-23 | 39 |
hematologic cancer | 5.28e-17 | 51 |
immune system cancer | 5.28e-17 | 51 |
chronic leukemia | 1.52e-09 | 8 |