FFCP PHASE1:Hg19::chr10:104629528..104629542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57412 | |EntrezGene=57412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17452 | |HGNC=17452 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_AB590972,BC160057_5end | |association_with_transcript=-19bp_to_AB590972,BC160057_5end | ||
|cluster_id=chr10:104629528..104629542,+ | |||
|coexpression_cluster_id=C228 | |coexpression_cluster_id=C228 | ||
|description=CAGE_peak_6_at_AS3MT_5end | |description=CAGE_peak_6_at_AS3MT_5end | ||
|id=chr10:104629528..104629542,+ | |id=chr10:104629528..104629542,+ | ||
|ontology_enrichment_celltype=CL:0002322!7.79e-18!5;CL:0000181!3.70e-17!12;CL:0000417!3.70e-17!12;CL:0000668!3.70e-17!12;CL:0000414!3.70e-17!12;CL:0000412!3.70e-17!12;CL:0000182!3.70e-17!12;CL:0002563!6.77e-07!4 | |ontology_enrichment_celltype=CL:0002322!7.79e-18!5;CL:0000181!3.70e-17!12;CL:0000417!3.70e-17!12;CL:0000668!3.70e-17!12;CL:0000414!3.70e-17!12;CL:0000412!3.70e-17!12;CL:0000182!3.70e-17!12;CL:0002563!6.77e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.87e-33;12!CL:0002563;1.11e-25;4!CL:0002253;7.77e-14;2!CL:0002231;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.03e-33,12;CL:0002563,9.82e-26,4;CL:0000223,6.33e-21,58;CL:0002253,7.30e-14,2;CL:0002231,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.20e-21;11!UBERON:0009497;5.57e-18;13!CL:0000223;6.23e-14;58!UBERON:0003104;3.21e-13;31!UBERON:0001041;3.51e-08;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;4.66e-08;14!DOID:7;9.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.34e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001242;1.11e-25;4!UBERON:0001262;1.11e-25;4!UBERON:0004786;1.11e-25;4!UBERON:0004808;1.11e-25;4!UBERON:0001277;1.11e-25;4!UBERON:0002107;2.32e-21;19!UBERON:0006925;2.32e-21;19!UBERON:0002423;2.29e-16;25!UBERON:0000485;3.79e-15;7!UBERON:0003929;3.79e-15;7!UBERON:0003350;2.20e-13;8!UBERON:0002365;1.32e-12;31!UBERON:0002330;1.32e-12;31!UBERON:0002368;4.78e-12;33!UBERON:0002530;1.48e-09;57!UBERON:0000949;2.37e-09;43!UBERON:0001007;1.31e-07;81!UBERON:0001052;1.44e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,9.82e-26,4;UBERON:0001262,9.82e-26,4;UBERON:0004786,9.82e-26,4;UBERON:0004808,9.82e-26,4;UBERON:0001277,9.82e-26,4;UBERON:0003929,1.83e-22,54;UBERON:0002107,2.45e-21,19;UBERON:0006925,2.45e-21,19;UBERON:0008836,2.45e-21,19;UBERON:0008835,1.66e-18,22;UBERON:0003894,1.66e-18,22;UBERON:0009854,1.00e-17,23;UBERON:0007499,2.38e-16,25;UBERON:0009497,2.38e-16,25;UBERON:0000015,2.38e-16,25;UBERON:0002423,2.38e-16,25;UBERON:0006235,2.38e-16,25;UBERON:0004161,2.38e-16,25;UBERON:0009856,9.69e-16,26;UBERON:0005911,7.86e-15,82;UBERON:0003350,2.07e-13,8;UBERON:0002365,2.79e-13,31;UBERON:0002330,2.79e-13,31;UBERON:0000485,4.94e-12,9;UBERON:0002368,8.13e-12,35;UBERON:0002530,9.48e-11,59;UBERON:0004921,3.19e-10,118;UBERON:0000949,2.77e-09,45;UBERON:0001007,2.55e-08,145;UBERON:0001555,2.55e-08,145;UBERON:0007026,2.55e-08,145;UBERON:0000490,3.31e-08,148;UBERON:0005172,8.46e-08,54;UBERON:0005173,8.46e-08,54;UBERON:0001052,1.40e-07,4;UBERON:0004119,1.56e-07,160;UBERON:0000925,1.56e-07,160;UBERON:0006595,1.56e-07,160;UBERON:0002417,4.71e-07,60;UBERON:0000916,4.71e-07,60 | |||
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|short_description=p6@AS3MT | |short_description=p6@AS3MT | ||
}} | }} |
Latest revision as of 02:42, 16 September 2015
Short description: | p6@AS3MT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AS3MT_5end |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | -19bp_to_AB590972, BC160057_5end |
EntrezGene: | AS3MT |
HGNC: | 17452 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.03e-33 | 12 |
intestinal epithelial cell | 9.82e-26 | 4 |
endodermal cell | 6.33e-21 | 58 |
epithelial cell of large intestine | 7.30e-14 | 2 |
epithelial cell of prostate | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.34e-08 | 14 |