FFCP PHASE1:Hg19::chr16:29827698..29827771,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:29827698..29827771,+
|short_description=p4@C16orf53
|description=CAGE_peak_4_at_C16orf53_5end
|association_with_transcript=170bp_to_NM_024516,uc002dug.3_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79447 | |EntrezGene=79447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28707 | |HGNC=28707 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BTK6 | |UniProt=Q9BTK6 | ||
|association_with_transcript=170bp_to_NM_024516,uc002dug.3_5end | |||
|cluster_id=chr16:29827698..29827771,+ | |||
|description=CAGE_peak_4_at_C16orf53_5end | |||
|id=chr16:29827698..29827771,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.08e-23!182;CL:0000037!1.64e-23!172;CL:0000566!1.64e-23!172;CL:0002032!3.24e-21!165;CL:0000837!3.24e-21!165;CL:0000763!4.75e-17!112;CL:0000049!4.75e-17!112;CL:0000738!1.01e-16!140;CL:0002087!6.47e-13!119;CL:0002031!8.25e-13!124;CL:0000766!5.05e-12!76;CL:0000839!1.93e-09!70;CL:0000557!4.18e-09!71;CL:0002194!1.30e-08!63;CL:0000576!1.30e-08!63;CL:0000040!1.30e-08!63;CL:0000559!1.30e-08!63;CL:0002009!2.07e-08!65;CL:0000084!3.92e-07!25;CL:0000827!3.92e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.40e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.23e-23,168;CL:0000988,6.15e-23,177;CL:0002032,8.49e-21,161;CL:0000837,8.49e-21,161;CL:0000763,1.88e-16,108;CL:0000049,1.88e-16,108;CL:0000738,3.45e-16,136;CL:0002087,2.08e-12,115;CL:0002031,3.48e-12,120;CL:0000766,2.67e-11,72;CL:0000839,1.25e-08,66;CL:0000557,2.11e-08,67;CL:0002194,6.29e-08,59;CL:0000576,6.29e-08,59;CL:0000040,6.29e-08,59;CL:0000559,6.29e-08,59;CL:0002009,9.90e-08,61;CL:0000084,3.38e-07,25;CL:0000827,3.38e-07,25;CL:0000115,7.09e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!6.61e-12!39;DOID:2531!7.60e-11!51;DOID:0060083!7.60e-11!51;DOID:8692!3.80e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.37e-10;31!DOID:1240;5.52e-09;39!DOID:2531;1.02e-07;51!DOID:0060083;1.02e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.82e-12,39;DOID:2531,4.44e-11,51;DOID:0060083,4.44e-11,51;DOID:8692,2.95e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-13!102;UBERON:0003061!1.31e-13!102;UBERON:0002193!2.32e-13!112;UBERON:0003081!2.36e-10!216;UBERON:0002405!1.15e-08!115;UBERON:0002371!1.53e-08!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.85e-13,98;UBERON:0003061,2.85e-13,98;UBERON:0002193,5.35e-13,108;UBERON:0003081,9.14e-10,203;UBERON:0002405,2.22e-09,93;UBERON:0002371,3.93e-08,76 | |||
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| ||
|short_description=p4@C16orf53 | |||
}} | }} |
Latest revision as of 04:22, 16 September 2015
Short description: | p4@C16orf53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C16orf53_5end |
Coexpression cluster: | NA |
Association with transcript: | 170bp_to_NM_024516, uc002dug.3_5end |
EntrezGene: | C16orf53 |
HGNC: | 28707 |
UniProt: | Q9BTK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.23e-23 | 168 |
hematopoietic cell | 6.15e-23 | 177 |
hematopoietic oligopotent progenitor cell | 8.49e-21 | 161 |
hematopoietic multipotent progenitor cell | 8.49e-21 | 161 |
myeloid cell | 1.88e-16 | 108 |
common myeloid progenitor | 1.88e-16 | 108 |
leukocyte | 3.45e-16 | 136 |
nongranular leukocyte | 2.08e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 3.48e-12 | 120 |
myeloid leukocyte | 2.67e-11 | 72 |
myeloid lineage restricted progenitor cell | 1.25e-08 | 66 |
granulocyte monocyte progenitor cell | 2.11e-08 | 67 |
monopoietic cell | 6.29e-08 | 59 |
monocyte | 6.29e-08 | 59 |
monoblast | 6.29e-08 | 59 |
promonocyte | 6.29e-08 | 59 |
macrophage dendritic cell progenitor | 9.90e-08 | 61 |
T cell | 3.38e-07 | 25 |
pro-T cell | 3.38e-07 | 25 |
endothelial cell | 7.09e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.85e-13 | 98 |
blood island | 2.85e-13 | 98 |
hemolymphoid system | 5.35e-13 | 108 |
lateral plate mesoderm | 9.14e-10 | 203 |
immune system | 2.22e-09 | 93 |
bone marrow | 3.93e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.82e-12 | 39 |
hematologic cancer | 4.44e-11 | 51 |
immune system cancer | 4.44e-11 | 51 |
myeloid leukemia | 2.95e-10 | 31 |