FFCP PHASE1:Hg19::chr3:154797315..154797322,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr3:154797315..154797322,+ to FFCP PHASE1:Hg19::chr3:154797315..154797322,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4311 | |EntrezGene=4311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |HGNC=7154 | ||
|TSSclassifier=strong | |||
|UniProt=P08473 | |UniProt=P08473 | ||
|association_with_transcript=-113bp_to_ENST00000460393,ENST00000491597,NM_000902,uc003fab.1_5end | |||
|cluster_id=chr3:154797315..154797322,+ | |||
|coexpression_cluster_id=C4297 | |||
|description=CAGE_peak_24_at_MME_5end | |||
|id=chr3:154797315..154797322,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.45e-20!180;CL:0002620!1.27e-14!23;CL:0000057!3.07e-11!75;CL:0000188!1.85e-09!9;CL:0000680!5.06e-08!57;CL:0000056!5.06e-08!57;CL:0000355!5.06e-08!57;CL:0002551!3.28e-07!6;CL:0000187!5.61e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002588;1.88e-21;2!CL:0002521;2.77e-14;3!CL:0000594;4.72e-14;3!CL:0000680;3.28e-13;7!CL:0002566;3.63e-11;1!CL:0000148;1.08e-09;10!CL:0002569;9.26e-08;6!CL:0000136;1.96e-07;13!CL:0000147;4.62e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,2.08e-21,2;CL:0002521,2.42e-14,3;CL:0000594,3.17e-14,3;CL:0002566,6.00e-11,1;CL:0000148,1.18e-09,10;CL:0000541,1.18e-09,10;CL:0002569,9.58e-08,6;CL:0000147,4.92e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.60e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.95e-12!83;UBERON:0002329!5.95e-12!83;UBERON:0003077!5.95e-12!83;UBERON:0003059!5.95e-12!83;UBERON:0007282!5.95e-12!83;UBERON:0009618!5.95e-12!83;UBERON:0007285!5.95e-12!83;UBERON:0004290!1.47e-10!70;UBERON:0002199!2.03e-10!45;UBERON:0002416!2.03e-10!45;UBERON:0000475!1.38e-08!365;UBERON:0002097!1.45e-08!40;UBERON:0001134!6.63e-08!61;UBERON:0002036!6.63e-08!61;UBERON:0003082!6.63e-08!61;UBERON:0000486!7.10e-08!82;UBERON:0003102!8.08e-08!95;UBERON:0002385!1.85e-07!63;UBERON:0001015!1.85e-07!63;UBERON:0000383!1.85e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.77e-14;3!UBERON:0005795;3.63e-11;1!UBERON:0002331;9.00e-10;10!UBERON:0002066;3.82e-09;5!UBERON:0002072;6.19e-09;5!UBERON:0003422;9.26e-08;6!UBERON:0003104;9.11e-07;7!UBERON:0009142;9.11e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.42e-14,3;UBERON:0002331,9.56e-10,10;UBERON:0000358,9.56e-10,10;UBERON:0000307,9.56e-10,10;UBERON:0000091,9.56e-10,10;UBERON:0000087,9.56e-10,10;UBERON:0007010,9.56e-10,10;UBERON:0007806,9.56e-10,10;UBERON:0008780,9.56e-10,10;UBERON:0005728,9.56e-10,10;UBERON:0002066,3.98e-09,5;UBERON:0002072,5.72e-09,5;UBERON:0003422,9.58e-08,6 | |||
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| ||
|short_description=p24@MME | |||
}} | }} |
Latest revision as of 04:37, 16 September 2015
Short description: | p24@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_MME_5end |
Coexpression cluster: | C4297_Smooth_tridermal_Melanocyte_Mesenchymal_Fibroblast_Skeletal_Wilms |
Association with transcript: | -113bp_to_ENST00000460393, ENST00000491597, NM_000902, uc003fab.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 2.08e-21 | 2 |
subcutaneous fat cell | 2.42e-14 | 3 |
skeletal muscle satellite cell | 3.17e-14 | 3 |
dark melanocyte | 6.00e-11 | 1 |
melanocyte | 1.18e-09 | 10 |
melanoblast | 1.18e-09 | 10 |
mesenchymal stem cell of umbilical cord | 9.58e-08 | 6 |
pigment cell | 4.92e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.42e-14 | 3 |
umbilical cord | 9.56e-10 | 10 |
blastocyst | 9.56e-10 | 10 |
blastula | 9.56e-10 | 10 |
bilaminar disc | 9.56e-10 | 10 |
inner cell mass | 9.56e-10 | 10 |
cleaving embryo | 9.56e-10 | 10 |
connecting stalk | 9.56e-10 | 10 |
inner cell mass derived epiblast | 9.56e-10 | 10 |
extraembryonic mesoderm | 9.56e-10 | 10 |
umbilical vein | 3.98e-09 | 5 |
hypodermis | 5.72e-09 | 5 |
mesenchyme of umbilical cord | 9.58e-08 | 6 |