FFCP PHASE1:Hg19::chr17:49124114..49124145,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9043 | |EntrezGene=9043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14524 | |HGNC=14524 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000511987_5end | |association_with_transcript=52bp_to_ENST00000511987_5end | ||
|cluster_id=chr17:49124114..49124145,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_SPAG9_5end | |description=CAGE_peak_3_at_SPAG9_5end | ||
|id=chr17:49124114..49124145,- | |id=chr17:49124114..49124145,- | ||
|ontology_enrichment_celltype=CL:0000133!7.21e-11!59;CL:0002319!7.63e-10!25;CL:0000047!1.44e-07!8;CL:0000221!4.44e-07!71 | |ontology_enrichment_celltype=CL:0000133!7.21e-11!59;CL:0002319!7.63e-10!25;CL:0000047!1.44e-07!8;CL:0000221!4.44e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.78e-12;25!CL:0000540;6.53e-09;6!CL:0000404;6.53e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.73e-12,59;CL:0002319,4.49e-12,25;CL:0000047,7.54e-12,8;CL:0000540,5.24e-09,6;CL:0000031,5.24e-09,6;CL:0000404,5.24e-09,6;CL:0000221,1.13e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.75e-18;82!CL:0000031;6.53e-09;6!CL:0000133;5.41e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.48e-58!94;UBERON:0001016!6.48e-58!94;UBERON:0005743!1.13e-57!86;UBERON:0001017!1.56e-57!82;UBERON:0001049!1.17e-47!57;UBERON:0005068!1.17e-47!57;UBERON:0006241!1.17e-47!57;UBERON:0007135!1.17e-47!57;UBERON:0000955!1.23e-46!69;UBERON:0006238!1.23e-46!69;UBERON:0002616!1.39e-44!59;UBERON:0002346!1.06e-41!90;UBERON:0003075!1.24e-40!86;UBERON:0007284!1.24e-40!86;UBERON:0000924!2.30e-37!173;UBERON:0006601!2.30e-37!173;UBERON:0002780!1.62e-36!41;UBERON:0001890!1.62e-36!41;UBERON:0006240!1.62e-36!41;UBERON:0004121!4.30e-36!169;UBERON:0003080!3.49e-35!42;UBERON:0000153!2.25e-31!129;UBERON:0007811!2.25e-31!129;UBERON:0007023!2.38e-31!115;UBERON:0000033!6.05e-31!123;UBERON:0002020!7.05e-31!34;UBERON:0003528!7.05e-31!34;UBERON:0001893!9.07e-31!34;UBERON:0003056!1.75e-30!61;UBERON:0002791!6.22e-30!33;UBERON:0001869!8.79e-29!32;UBERON:0000956!9.06e-23!25;UBERON:0000203!9.06e-23!25;UBERON:0002619!1.16e-20!22;UBERON:0001950!6.42e-19!20;UBERON:0000475!1.43e-15!365;UBERON:0003076!3.21e-13!15;UBERON:0003057!3.21e-13!15;UBERON:0000468!3.34e-12!659;UBERON:0004732!1.94e-11!13;UBERON:0000064!1.71e-10!219;UBERON:0004733!1.72e-10!12;UBERON:0002028!1.72e-10!12;UBERON:0007277!1.72e-10!12;UBERON:0000922!4.35e-10!612;UBERON:0000025!4.61e-10!194;UBERON:0000483!9.48e-10!309;UBERON:0000119!1.26e-09!312;UBERON:0002308!1.66e-09!9;UBERON:0000125!1.66e-09!9;UBERON:0002420!3.31e-09!9;UBERON:0007245!3.31e-09!9;UBERON:0010009!3.31e-09!9;UBERON:0010011!3.31e-09!9;UBERON:0000454!3.31e-09!9;UBERON:0000481!2.63e-08!347;UBERON:0002050!4.78e-08!605;UBERON:0005423!4.78e-08!605;UBERON:0001871!5.04e-08!7;UBERON:0000467!5.63e-08!625;UBERON:0000480!7.15e-08!626;UBERON:0002680!8.16e-08!9;UBERON:0001895!8.16e-08!9;UBERON:0010092!8.16e-08!9;UBERON:0000923!9.64e-08!604;UBERON:0005291!9.64e-08!604;UBERON:0006598!9.64e-08!604;UBERON:0002532!9.64e-08!604;UBERON:0009663!1.22e-07!7;UBERON:0000062!2.89e-07!511;UBERON:0004111!3.97e-07!241;UBERON:0000477!4.28e-07!286;UBERON:0001894!4.33e-07!7;UBERON:0006222!4.33e-07!7;UBERON:0002298!9.39e-07!8 | |ontology_enrichment_uberon=UBERON:0000073!6.48e-58!94;UBERON:0001016!6.48e-58!94;UBERON:0005743!1.13e-57!86;UBERON:0001017!1.56e-57!82;UBERON:0001049!1.17e-47!57;UBERON:0005068!1.17e-47!57;UBERON:0006241!1.17e-47!57;UBERON:0007135!1.17e-47!57;UBERON:0000955!1.23e-46!69;UBERON:0006238!1.23e-46!69;UBERON:0002616!1.39e-44!59;UBERON:0002346!1.06e-41!90;UBERON:0003075!1.24e-40!86;UBERON:0007284!1.24e-40!86;UBERON:0000924!2.30e-37!173;UBERON:0006601!2.30e-37!173;UBERON:0002780!1.62e-36!41;UBERON:0001890!1.62e-36!41;UBERON:0006240!1.62e-36!41;UBERON:0004121!4.30e-36!169;UBERON:0003080!3.49e-35!42;UBERON:0000153!2.25e-31!129;UBERON:0007811!2.25e-31!129;UBERON:0007023!2.38e-31!115;UBERON:0000033!6.05e-31!123;UBERON:0002020!7.05e-31!34;UBERON:0003528!7.05e-31!34;UBERON:0001893!9.07e-31!34;UBERON:0003056!1.75e-30!61;UBERON:0002791!6.22e-30!33;UBERON:0001869!8.79e-29!32;UBERON:0000956!9.06e-23!25;UBERON:0000203!9.06e-23!25;UBERON:0002619!1.16e-20!22;UBERON:0001950!6.42e-19!20;UBERON:0000475!1.43e-15!365;UBERON:0003076!3.21e-13!15;UBERON:0003057!3.21e-13!15;UBERON:0000468!3.34e-12!659;UBERON:0004732!1.94e-11!13;UBERON:0000064!1.71e-10!219;UBERON:0004733!1.72e-10!12;UBERON:0002028!1.72e-10!12;UBERON:0007277!1.72e-10!12;UBERON:0000922!4.35e-10!612;UBERON:0000025!4.61e-10!194;UBERON:0000483!9.48e-10!309;UBERON:0000119!1.26e-09!312;UBERON:0002308!1.66e-09!9;UBERON:0000125!1.66e-09!9;UBERON:0002420!3.31e-09!9;UBERON:0007245!3.31e-09!9;UBERON:0010009!3.31e-09!9;UBERON:0010011!3.31e-09!9;UBERON:0000454!3.31e-09!9;UBERON:0000481!2.63e-08!347;UBERON:0002050!4.78e-08!605;UBERON:0005423!4.78e-08!605;UBERON:0001871!5.04e-08!7;UBERON:0000467!5.63e-08!625;UBERON:0000480!7.15e-08!626;UBERON:0002680!8.16e-08!9;UBERON:0001895!8.16e-08!9;UBERON:0010092!8.16e-08!9;UBERON:0000923!9.64e-08!604;UBERON:0005291!9.64e-08!604;UBERON:0006598!9.64e-08!604;UBERON:0002532!9.64e-08!604;UBERON:0009663!1.22e-07!7;UBERON:0000062!2.89e-07!511;UBERON:0004111!3.97e-07!241;UBERON:0000477!4.28e-07!286;UBERON:0001894!4.33e-07!7;UBERON:0006222!4.33e-07!7;UBERON:0002298!9.39e-07!8 | ||
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| ||
|short_description=p3@SPAG9 | |short_description=p3@SPAG9 | ||
}} | }} |
Latest revision as of 04:50, 16 September 2015
Short description: | p3@SPAG9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPAG9_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 52bp_to_ENST00000511987_5end |
EntrezGene: | SPAG9 |
HGNC: | 14524 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.73e-12 | 59 |
neural cell | 4.49e-12 | 25 |
neuronal stem cell | 7.54e-12 | 8 |
neuron | 5.24e-09 | 6 |
neuroblast | 5.24e-09 | 6 |
electrically signaling cell | 5.24e-09 | 6 |
ectodermal cell | 1.13e-08 | 72 |