FFCP PHASE1:Hg19::chr3:156008904..156008912,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6228 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=78bp_to_ENST00000302490_5end | |||
|cluster_id=chr3:156008904..156008912,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_18_at_KCNAB1_5end | |||
|id=chr3:156008904..156008912,+ | |||
|ontology_enrichment_celltype=CL:1000306!1.06e-07!4;CL:0002547!1.06e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002594;1.98e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.16e-26;1!UBERON:0010122;9.40e-14;2 | |||
|ontology_enrichment_disease=DOID:2394!5.66e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!3.03e-40!34;UBERON:0002780!1.99e-39!41;UBERON:0001890!1.99e-39!41;UBERON:0006240!1.99e-39!41;UBERON:0001869!2.98e-39!32;UBERON:0003080!2.35e-38!42;UBERON:0002791!1.27e-37!33;UBERON:0001049!5.10e-37!57;UBERON:0005068!5.10e-37!57;UBERON:0006241!5.10e-37!57;UBERON:0007135!5.10e-37!57;UBERON:0002020!1.73e-36!34;UBERON:0003528!1.73e-36!34;UBERON:0002616!9.04e-33!59;UBERON:0003056!4.28e-29!61;UBERON:0000955!6.25e-29!69;UBERON:0006238!6.25e-29!69;UBERON:0005743!1.43e-27!86;UBERON:0001017!3.04e-27!82;UBERON:0000073!5.19e-26!94;UBERON:0001016!5.19e-26!94;UBERON:0003075!8.29e-26!86;UBERON:0007284!8.29e-26!86;UBERON:0002619!1.11e-24!22;UBERON:0002346!2.52e-24!90;UBERON:0007023!8.10e-24!115;UBERON:0001950!2.92e-23!20;UBERON:0000956!1.97e-21!25;UBERON:0000203!1.97e-21!25;UBERON:0000153!1.63e-18!129;UBERON:0007811!1.63e-18!129;UBERON:0002420!7.14e-18!9;UBERON:0007245!7.14e-18!9;UBERON:0010009!7.14e-18!9;UBERON:0010011!7.14e-18!9;UBERON:0000454!7.14e-18!9;UBERON:0002308!7.89e-18!9;UBERON:0000125!7.89e-18!9;UBERON:0009663!1.76e-17!7;UBERON:0000033!5.46e-17!123;UBERON:0000025!1.15e-16!194;UBERON:0000369!1.08e-14!4;UBERON:0002435!1.08e-14!4;UBERON:0000204!1.08e-14!4;UBERON:0010082!1.08e-14!4;UBERON:0000200!2.25e-13!6;UBERON:0004111!2.19e-12!241;UBERON:0004121!4.79e-12!169;UBERON:0000924!1.37e-11!173;UBERON:0006601!1.37e-11!173;UBERON:0005383!1.96e-11!3;UBERON:0005382!1.96e-11!3;UBERON:0000477!3.44e-11!286;UBERON:0000483!2.99e-10!309;UBERON:0000119!4.73e-10!312;UBERON:0002771!6.85e-10!3;UBERON:0001871!1.35e-09!7;UBERON:0001873!3.60e-08!2;UBERON:0010122!3.60e-08!2;UBERON:0000415!1.06e-07!4;UBERON:0007240!1.06e-07!4;UBERON:0005742!1.06e-07!4;UBERON:0005734!1.06e-07!4;UBERON:0004664!1.06e-07!4;UBERON:0004663!1.06e-07!4;UBERON:0001875!1.51e-07!2;UBERON:0006514!1.51e-07!2;UBERON:0000341!2.38e-07!2;UBERON:0000349!9.27e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;1.06e-56;7!UBERON:0000369;4.58e-56;4!UBERON:0002435;4.58e-56;4!UBERON:0000204;4.58e-56;4!UBERON:0002420;2.84e-44;9!UBERON:0000125;2.84e-44;9!UBERON:0007245;2.84e-44;9!UBERON:0002308;2.84e-44;9!UBERON:0010009;2.84e-44;9!UBERON:0010011;2.84e-44;9!UBERON:0000454;2.84e-44;9!UBERON:0005383;6.51e-34;3!UBERON:0005382;6.51e-34;3!UBERON:0001882;4.61e-26;1!UBERON:0001874;4.61e-26;1!UBERON:0005403;4.61e-26;1!UBERON:0000349;8.12e-21;5!UBERON:0002791;1.83e-19;32!UBERON:0003528;9.63e-19;34!UBERON:0002020;9.63e-19;34!UBERON:0001869;3.46e-18;32!UBERON:0001893;5.05e-16;34!UBERON:0002780;7.82e-16;41!UBERON:0001890;7.82e-16;41!UBERON:0001873;9.40e-14;2!UBERON:0001954;9.40e-14;2!UBERON:0001875;9.40e-14;2!UBERON:0003022;9.40e-14;2!UBERON:0002421;9.40e-14;2!UBERON:0006514;9.40e-14;2!UBERON:0002600;9.40e-14;2!UBERON:0000073;2.71e-09;53!UBERON:0002616;2.71e-09;53!UBERON:0000955;3.39e-09;68!UBERON:0001017;1.29e-07;75!UBERON:0001310;1.98e-07;4!UBERON:0002119;1.98e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,1.06e-56,7;UBERON:0000369,5.53e-56,4;UBERON:0002435,5.53e-56,4;UBERON:0000204,5.53e-56,4;UBERON:0010082,5.53e-56,4;UBERON:0002420,2.84e-44,9;UBERON:0000125,2.84e-44,9;UBERON:0007245,2.84e-44,9;UBERON:0002308,2.84e-44,9;UBERON:0010009,2.84e-44,9;UBERON:0010011,2.84e-44,9;UBERON:0000454,2.84e-44,9;UBERON:0005383,6.51e-34,3;UBERON:0005382,6.51e-34,3;UBERON:0001882,5.93e-26,1;UBERON:0005403,5.93e-26,1;UBERON:0001874,7.62e-26,1;UBERON:0002780,2.12e-21,41;UBERON:0001890,2.12e-21,41;UBERON:0003080,2.12e-21,41;UBERON:0006240,2.12e-21,41;UBERON:0000349,8.98e-21,5;UBERON:0002791,4.86e-19,32;UBERON:0001869,4.86e-19,32;UBERON:0003528,5.68e-18,34;UBERON:0002020,5.68e-18,34;UBERON:0001893,5.68e-18,34;UBERON:0000073,1.08e-16,53;UBERON:0002616,1.08e-16,53;UBERON:0001049,8.02e-16,56;UBERON:0005068,8.02e-16,56;UBERON:0006241,8.02e-16,56;UBERON:0007135,8.02e-16,56;UBERON:0003056,1.47e-14,61;UBERON:0001873,7.30e-14,2;UBERON:0010122,7.30e-14,2;UBERON:0001875,8.28e-14,2;UBERON:0006514,8.28e-14,2;UBERON:0001954,9.40e-14,2;UBERON:0003022,9.40e-14,2;UBERON:0002421,9.40e-14,2;UBERON:0002600,9.40e-14,2;UBERON:0000955,6.54e-13,68;UBERON:0006238,6.54e-13,68;UBERON:0001017,6.64e-11,81;UBERON:0003075,6.64e-11,82;UBERON:0007284,6.64e-11,82;UBERON:0002346,2.09e-10,86;UBERON:0001016,7.63e-10,89;UBERON:0010371,1.25e-08,104;UBERON:0007023,5.99e-08,114;UBERON:0001310,1.92e-07,4;UBERON:0002119,2.04e-07,4;UBERON:0010314,8.25e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40847801266121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.844175070377856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,4.2167600230561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823040347426423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0,0.160753148465019,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0.465788870628778,1.24411862352257,0.265841714557995,0,0,0,0.813741466409323,0.181848659202559,0,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883445729729405,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,2.376481328569,0,0.638535436228605,0.82046545696302,0,0.553258019713743,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,0.206686796501184,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.855046056317038,0,0,0.156986185701028,2.04250266890802,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.413731983447581,0.213233981900981,0.476128862927481,0,0,0,0,0.808468755832877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@KCNAB1 | |||
}} |
Latest revision as of 06:03, 16 September 2015
Short description: | p18@KCNAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_KCNAB1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 78bp_to_ENST00000302490_5end |
EntrezGene: | KCNAB1 |
HGNC: | 6228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 1.92e-07 | 4 |