FFCP PHASE1:Hg19::chr2:109204953..109204968,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3987 | |EntrezGene=3987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6616 | |HGNC=6616 | ||
|TSSclassifier=strong | |||
|UniProt=P48059 | |UniProt=P48059 | ||
|association_with_transcript=31bp_to_ENST00000393310,NM_001193488,uc002teh.2_5end | |association_with_transcript=31bp_to_ENST00000393310,NM_001193488,uc002teh.2_5end | ||
|cluster_id=chr2:109204953..109204968,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_10_at_LIMS1_5end | |description=CAGE_peak_10_at_LIMS1_5end |
Latest revision as of 06:22, 16 September 2015
Short description: | p10@LIMS1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LIMS1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 31bp_to_ENST00000393310, NM_001193488, uc002teh.2_5end |
EntrezGene: | LIMS1 |
HGNC: | 6616 |
UniProt: | P48059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p10@LIMS1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.85e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.85e-75 | 42 |
myeloid cell | 3.24e-72 | 108 |
common myeloid progenitor | 3.24e-72 | 108 |
myeloid leukocyte | 7.78e-72 | 72 |
defensive cell | 1.97e-71 | 48 |
phagocyte | 1.97e-71 | 48 |
macrophage dendritic cell progenitor | 7.65e-66 | 61 |
granulocyte monocyte progenitor cell | 3.15e-65 | 67 |
monopoietic cell | 3.58e-65 | 59 |
Showing 1 to 10 of 33 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-64 | 98 |
blood island | 1.07e-64 | 98 |
hemolymphoid system | 2.26e-57 | 108 |
bone marrow | 4.52e-56 | 76 |
bone element | 7.15e-54 | 82 |
skeletal element | 5.71e-48 | 90 |
immune system | 1.41e-43 | 93 |
skeletal system | 6.48e-42 | 100 |
lateral plate mesoderm | 1.64e-28 | 203 |
musculoskeletal system | 3.35e-21 | 167 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
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chronic leukemia | 1.36e-10 | 8 |
myeloid leukemia | 2.98e-07 | 31 |
Showing 1 to 2 of 2 entries