FFCP PHASE1:Hg19::chr19:1513002..1513032,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339366 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27912 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZMM2,Q0VD77 | |||
|association_with_transcript=155bp_to_ENST00000330475,NM_213604,uc002ltd.2,uc010xgq.1_5end | |||
|cluster_id=chr19:1513002..1513032,- | |||
|description=CAGE_peak_1_at_ADAMTSL5_5end | |||
|id=chr19:1513002..1513032,- | |||
|ontology_enrichment_celltype=CL:0000057!4.11e-09!75;CL:0000066!1.31e-08!254;CL:0002076!1.35e-08!43;CL:0000223!1.55e-07!59;CL:0002620!2.39e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.31e-07;23!CL:0002076;5.30e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.18e-09,76;CL:0000066,3.32e-09,253;CL:0002076,1.24e-08,42;CL:0002620,1.74e-07,23;CL:0000223,2.74e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.72e-15!169;UBERON:0000925!1.72e-15!169;UBERON:0006595!1.72e-15!169;UBERON:0003102!4.03e-15!95;UBERON:0001007!1.19e-11!155;UBERON:0001555!1.19e-11!155;UBERON:0007026!1.19e-11!155;UBERON:0000077!4.91e-10!130;UBERON:0004923!7.23e-10!57;UBERON:0004921!2.77e-09!129;UBERON:0004185!2.77e-09!129;UBERON:0002097!2.67e-08!40;UBERON:0003104!3.66e-08!238;UBERON:0009142!3.66e-08!238;UBERON:0002199!2.35e-07!45;UBERON:0002416!2.35e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.23e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.93e-16,99;UBERON:0004119,7.54e-13,160;UBERON:0000925,7.54e-13,160;UBERON:0006595,7.54e-13,160;UBERON:0004923,7.05e-10,66;UBERON:0001007,4.79e-09,145;UBERON:0001555,4.79e-09,145;UBERON:0007026,4.79e-09,145;UBERON:0002097,6.69e-09,41;UBERON:0002199,5.06e-08,46;UBERON:0002416,5.06e-08,46;UBERON:0004921,5.65e-07,118 | |||
|phase1_expression=2.90685406832891,3.63970890614671,2.53717927372748,10.007329835313,7.59833860526389,6.10636966870258,2.53299878168311,0,2.35067065379855,0.245733936501509,2.09340350391728,5.24259293112413,7.3854753903967,0.74259811776028,0.662794751455832,1.34465029290355,1.20538905604795,1.46062018077475,0,0,0.612002073732759,0.313454721478088,0,0,0.125542639594803,0,0.0821005894499457,0,0,0.767658796194425,0.154816123316076,5.51652734687356,7.8313538882345,12.5716363456708,0.697204805222715,0,0,0,0.200544447470142,0.868043482863407,0.223915474239924,0.971680998056939,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.419317291016752,0,0,0,0.285012743741249,0.79566670879636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34406609193516,1.57204305099666,2.2616164889946,3.8452893939856,3.58514493296949,0.946895611469467,3.89653456815823,1.6711568532776,1.47302953737419,0.443067789167242,0.812411591295047,4.61128751012431,6.76308607311367,2.79544437826249,4.42160028457357,2.02862160014537,2.52087157375503,2.1403266247177,4.18142095219907,4.19244567980995,1.53288197440768,0,0.253019692019503,1.91139248594458,1.95325036156926,1.90090408889675,1.80690142893327,1.02389288923535,1.24930726552346,2.60454977248419,0,2.21767417547206,2.13952156626806,2.60683926989038,0,0.670700859703636,1.40648818027883,4.69870898099936,1.50401373190767,5.93870727739377,0,5.35298357332899,0.0945348171640679,0.221729397462564,0.263504357079378,2.42311289670768,11.6574492253614,5.56176664176644,0.324547393654683,0.348259474598534,0.531831842075461,0,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7745394078484,8.94549513051573,1.13967460498122,7.67973248716669,14.9155042789383,3.90135220418193,3.92474320099615,1.06748995729705,3.20667812942308,2.48968828319813,1.61652806483626,0.653847612453835,0.454072282934794,0,4.21778577300834,3.43376084513353,0.570471821544449,4.48346041655403,1.17434498643765,2.26622122115384,1.12360645361799,2.85815839756851,0.982674538494144,3.71972812232756,1.18800285728205,6.92347401979959,3.64064544775211,3.59309070908119,1.85169725349473,2.00189631795143,2.77064115484183,1.31693286264251,4.29082914118628,3.15499923703853,1.81491493056034,8.25192324168765,4.91181994282705,3.60284231971255,13.2040082277137,5.35873152039882,9.53269998168828,6.14185625894246,13.5021065793013,4.96928726322113,11.3595198409852,5.98324341174946,8.24394889775941,11.7153165530483,3.32481924151213,3.89989362314122,3.09217365061275,4.09119180886252,3.72845974005705,0.121973706129595,0.265059536642971,0.116193942869518,0.621966330092223,0.504641701751257,0.36497735907583,1.56449532329816,4.5026865673502,5.52539685409922,1.39310378409594,2.88751792667834,8.04486240270938,5.56329477257736,4.33819853790268,6.72793233667603,7.1900216550494,5.69449485866632,3.91010793664477,5.49420102350969,4.61696588335668,0,2.80483547606892,3.2925920906512,2.94017422771084,1.26755034821831,1.96565443335525,1.18157981336281,0,4.05861847192275,1.3725424823882,6.25576626829166,2.24803506515239,3.51851403440708,7.4996640578409,5.53874119027552,6.23960871167747,0,0.115930404975077,0.234817388471643,0,0,0,2.37061319387782,0.858486162094873,0.246217006087397,0,0,1.87467667973554,4.70349958956807,2.97727704209012,1.61205340865127,3.19697332365358,3.06706143332169,0,0.264145302039678,0.414656231081544,0,0.6312121671319,3.30189050319279,7.25778008560728,7.03304683260282,3.4214489204541,3.18765227380303,6.00686115687835,4.28739648945867,0.336393253036082,0.87192013766656,0.07333828582095,4.00742318849111,10.7296933755565,0.845302752556,1.86156681609409,4.16029747645464,0.257207374262142,0,1.0656887160644,2.00169191121407,10.8524321078289,2.46972101034231,0.325736184293735,3.55391948742546,1.58390374586686,2.71295439353627,2.61460037580088,4.1988656296464,0,0,0,0.479249710983165,1.14861935834114,0,2.75084482668401,1.02738161275192,1.07436577943937,6.83719378360516,0.197030760201927,1.50939302401662,2.18183161675572,0,0,0,0,0,0.749007023947182,0,0,0.981531933753119,0,0.813795071099207,6.23912584592421,5.88815663030634,7.41201350659493,6.91134348457008,1.50473049863859,2.27407504055985,5.17365356462525,0,0.737476674166813,4.17041349446798,0.979005787313703,0.686286847621712,0.82707210449155,2.15714200818617,1.28073069364133,10.9125925720653,8.32177197552485,9.67648938654977,2.72918588600655,6.59886485138669,4.77122160536225,2.56278298511402,5.11707249066703,5.79074116116987,4.45254199334973,1.54209693802656,1.24293207719189,1.64254312027618,4.15403543346897,1.27831416305955,4.59265908448164,3.20810352485256,5.89318329189736,3.09999010044438,6.73737321624853,6.42509633301178,0.451199612907412,1.92538342761037,0.784349769176855,4.38417673959782,1.68882606228601,0,0,0,1.54227252690289,0.812839312631559,3.01013864312912,0,0.831076008928724,0.671624264166535,0,0,3.84675187674584,2.95213181129735,2.92840555197873,1.13345112812495,0,0,4.59412430396938,2.60024098414608,6.42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| |||
|short_description=p1@ADAMTSL5 | |||
}} |
Latest revision as of 06:37, 16 September 2015
Short description: | p1@ADAMTSL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAMTSL5_5end |
Coexpression cluster: | NA |
Association with transcript: | 155bp_to_ENST00000330475, NM_213604, uc002ltd.2, uc010xgq.1_5end |
EntrezGene: | ADAMTSL5 |
HGNC: | 27912 |
UniProt: | Q6ZMM2Q0VD77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.18e-09 | 76 |
epithelial cell | 3.32e-09 | 253 |
endo-epithelial cell | 1.24e-08 | 42 |
skin fibroblast | 1.74e-07 | 23 |
endodermal cell | 2.74e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.93e-16 | 99 |
endoderm-derived structure | 7.54e-13 | 160 |
endoderm | 7.54e-13 | 160 |
presumptive endoderm | 7.54e-13 | 160 |
organ component layer | 7.05e-10 | 66 |
digestive system | 4.79e-09 | 145 |
digestive tract | 4.79e-09 | 145 |
primitive gut | 4.79e-09 | 145 |
skin of body | 6.69e-09 | 41 |
integument | 5.06e-08 | 46 |
integumental system | 5.06e-08 | 46 |
subdivision of digestive tract | 5.65e-07 | 118 |