FFCP PHASE1:Hg19::chr2:24149918..24149974,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54454 | |EntrezGene=54454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29230 | |HGNC=29230 | ||
|TSSclassifier=strong | |||
|UniProt=C9JG15,E7EWW1,Q9ULI0,Q8IWJ3 | |UniProt=C9JG15,E7EWW1,Q9ULI0,Q8IWJ3 | ||
|association_with_transcript=0bp_to_ENST00000439915,ENST00000442596,NM_001242338,NM_017552,uc002rek.3,uc010exx.1,uc010yki.1_5end | |association_with_transcript=0bp_to_ENST00000439915,ENST00000442596,NM_001242338,NM_017552,uc002rek.3,uc010exx.1,uc010yki.1_5end | ||
|cluster_id=chr2:24149918..24149974,- | |||
|coexpression_cluster_id=C4210 | |||
|description=CAGE_peak_1_at_ATAD2B_5end | |description=CAGE_peak_1_at_ATAD2B_5end | ||
|id=chr2:24149918..24149974,- | |id=chr2:24149918..24149974,- | ||
|ontology_enrichment_celltype=CL:0000037!7.06e-28!172;CL:0000566!7.06e-28!172;CL:0000738!4.59e-26!140;CL:0000988!5.37e-25!182;CL:0002032!8.67e-25!165;CL:0000837!8.67e-25!165;CL:0002031!9.63e-20!124;CL:0002087!1.18e-18!119;CL:0000763!3.63e-13!112;CL:0000049!3.63e-13!112;CL:0000838!5.78e-12!52;CL:0000542!9.38e-12!53;CL:0000051!9.38e-12!53;CL:0000766!3.06e-10!76;CL:0000557!9.03e-09!71;CL:0000839!6.16e-08!70;CL:0000860!1.25e-07!45;CL:0002009!1.40e-07!65;CL:0002057!5.21e-07!42;CL:0000791!6.57e-07!18;CL:0000789!6.57e-07!18;CL:0002420!6.57e-07!18;CL:0002419!6.57e-07!18;CL:0000790!6.57e-07!18;CL:0002194!8.35e-07!63;CL:0000576!8.35e-07!63;CL:0000040!8.35e-07!63;CL:0000559!8.35e-07!63 | |ontology_enrichment_celltype=CL:0000037!7.06e-28!172;CL:0000566!7.06e-28!172;CL:0000738!4.59e-26!140;CL:0000988!5.37e-25!182;CL:0002032!8.67e-25!165;CL:0000837!8.67e-25!165;CL:0002031!9.63e-20!124;CL:0002087!1.18e-18!119;CL:0000763!3.63e-13!112;CL:0000049!3.63e-13!112;CL:0000838!5.78e-12!52;CL:0000542!9.38e-12!53;CL:0000051!9.38e-12!53;CL:0000766!3.06e-10!76;CL:0000557!9.03e-09!71;CL:0000839!6.16e-08!70;CL:0000860!1.25e-07!45;CL:0002009!1.40e-07!65;CL:0002057!5.21e-07!42;CL:0000791!6.57e-07!18;CL:0000789!6.57e-07!18;CL:0002420!6.57e-07!18;CL:0002419!6.57e-07!18;CL:0000790!6.57e-07!18;CL:0002194!8.35e-07!63;CL:0000576!8.35e-07!63;CL:0000040!8.35e-07!63;CL:0000559!8.35e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.75e-07;53!CL:0000791;8.43e-07;18!CL:0000789;8.43e-07;18!CL:0002419;8.43e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.69e-27,168;CL:0000738,9.56e-26,136;CL:0000988,2.92e-25,177;CL:0002032,2.05e-24,161;CL:0000837,2.05e-24,161;CL:0002031,2.01e-19,120;CL:0002087,2.10e-18,115;CL:0000763,7.74e-13,108;CL:0000049,7.74e-13,108;CL:0000838,5.58e-12,52;CL:0000542,9.06e-12,53;CL:0000051,9.06e-12,53;CL:0000766,6.05e-10,72;CL:0000557,1.80e-08,67;CL:0000839,1.24e-07,66;CL:0002009,2.48e-07,61;CL:0000860,5.11e-07,42;CL:0002057,5.11e-07,42;CL:0000791,6.45e-07,18;CL:0000789,6.45e-07,18;CL:0002420,6.45e-07,18;CL:0002419,6.45e-07,18;CL:0000790,6.45e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.75e-07;53!CL:0000790;8.43e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.12e-17!115;UBERON:0002390!5.26e-10!102;UBERON:0003061!5.26e-10!102;UBERON:0002193!1.03e-08!112;UBERON:0001049!1.61e-08!57;UBERON:0005068!1.61e-08!57;UBERON:0006241!1.61e-08!57;UBERON:0007135!1.61e-08!57;UBERON:0001017!2.47e-08!82;UBERON:0005743!2.16e-07!86;UBERON:0000955!4.03e-07!69;UBERON:0006238!4.03e-07!69;UBERON:0000073!5.90e-07!94;UBERON:0001016!5.90e-07!94;UBERON:0002616!6.85e-07!59;UBERON:0003080!8.15e-07!42;UBERON:0002405!9.67e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.16e-17,114;UBERON:0002390,1.00e-09,98;UBERON:0003061,1.00e-09,98;UBERON:0002193,1.98e-08,108;UBERON:0001049,4.26e-08,56;UBERON:0005068,4.26e-08,56;UBERON:0006241,4.26e-08,56;UBERON:0007135,4.26e-08,56;UBERON:0001017,5.82e-08,81;UBERON:0001016,2.07e-07,89;UBERON:0000073,2.38e-07,53;UBERON:0002616,2.38e-07,53;UBERON:0000955,9.37e-07,68;UBERON:0006238,9.37e-07,68 | |||
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| ||
|short_description=p1@ATAD2B | |short_description=p1@ATAD2B | ||
}} | }} |
Latest revision as of 07:50, 16 September 2015
Short description: | p1@ATAD2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATAD2B_5end |
Coexpression cluster: | C4210_granulocyte_Neutrophils_Dendritic_acute_CD4_Eosinophils_CD14 |
Association with transcript: | 0bp_to_ENST00000439915, ENST00000442596, NM_001242338, NM_017552, uc002rek.3, uc010exx.1, uc010yki.1_5end |
EntrezGene: | ATAD2B |
HGNC: | 29230 |
UniProt: | C9JG15E7EWW1Q9ULI0Q8IWJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.69e-27 | 168 |
leukocyte | 9.56e-26 | 136 |
hematopoietic cell | 2.92e-25 | 177 |
hematopoietic oligopotent progenitor cell | 2.05e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-24 | 161 |
hematopoietic lineage restricted progenitor cell | 2.01e-19 | 120 |
nongranular leukocyte | 2.10e-18 | 115 |
myeloid cell | 7.74e-13 | 108 |
common myeloid progenitor | 7.74e-13 | 108 |
lymphoid lineage restricted progenitor cell | 5.58e-12 | 52 |
lymphocyte | 9.06e-12 | 53 |
common lymphoid progenitor | 9.06e-12 | 53 |
myeloid leukocyte | 6.05e-10 | 72 |
granulocyte monocyte progenitor cell | 1.80e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.24e-07 | 66 |
macrophage dendritic cell progenitor | 2.48e-07 | 61 |
classical monocyte | 5.11e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.11e-07 | 42 |
mature alpha-beta T cell | 6.45e-07 | 18 |
alpha-beta T cell | 6.45e-07 | 18 |
immature T cell | 6.45e-07 | 18 |
mature T cell | 6.45e-07 | 18 |
immature alpha-beta T cell | 6.45e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.16e-17 | 114 |
hematopoietic system | 1.00e-09 | 98 |
blood island | 1.00e-09 | 98 |
hemolymphoid system | 1.98e-08 | 108 |
neural tube | 4.26e-08 | 56 |
neural rod | 4.26e-08 | 56 |
future spinal cord | 4.26e-08 | 56 |
neural keel | 4.26e-08 | 56 |
central nervous system | 5.82e-08 | 81 |
nervous system | 2.07e-07 | 89 |
regional part of nervous system | 2.38e-07 | 53 |
regional part of brain | 2.38e-07 | 53 |
brain | 9.37e-07 | 68 |
future brain | 9.37e-07 | 68 |