FFCP PHASE1:Hg19::chr3:157824322..157824334,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6474 | |EntrezGene=6474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10854 | |HGNC=10854 | ||
|TSSclassifier=strong | |||
|UniProt=O60902 | |UniProt=O60902 | ||
|association_with_transcript=-30bp_to_ENST00000389589_5end | |association_with_transcript=-30bp_to_ENST00000389589_5end | ||
|cluster_id=chr3:157824322..157824334,- | |||
|coexpression_cluster_id=C126 | |||
|description=CAGE_peak_7_at_SHOX2_5end | |description=CAGE_peak_7_at_SHOX2_5end | ||
|id=chr3:157824322..157824334,- | |id=chr3:157824322..157824334,- | ||
|ontology_enrichment_celltype=CL:0002620!2.59e-08!23 | |ontology_enrichment_celltype=CL:0002620!2.59e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.05e-15;2!CL:0002552;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-15,2;CL:0002552,6.39e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003099;9.98e-30;1!UBERON:0003852;9.98e-30;1!UBERON:0005062;1.82e-08;4!UBERON:0007284;1.82e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.78e-08!40;UBERON:0002199!3.52e-07!45;UBERON:0002416!3.52e-07!45 | |ontology_enrichment_uberon=UBERON:0002097!1.78e-08!40;UBERON:0002199!3.52e-07!45;UBERON:0002416!3.52e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;9.98e-30;1!UBERON:0008193;9.98e-30;1!UBERON:0010912;9.98e-30;1!UBERON:0002514;9.98e-30;1!UBERON:0003457;9.98e-30;1!UBERON:0008907;9.98e-30;1!UBERON:0008001;9.98e-30;1!UBERON:0007213;9.98e-30;1!UBERON:0009891;9.98e-30;1!UBERON:0007914;9.98e-30;1!UBERON:0007375;9.98e-30;1!UBERON:0003323;9.98e-30;1!UBERON:0010258;9.98e-30;1!UBERON:0005253;9.98e-30;1!UBERON:0007842;9.98e-30;1!UBERON:0002397;9.98e-30;1!UBERON:0003113;9.98e-30;1!UBERON:0003277;9.98e-30;1!UBERON:0001709;9.98e-30;1!UBERON:0002244;9.98e-30;1!UBERON:0005620;9.98e-30;1!UBERON:0010364;9.98e-30;1!UBERON:0004288;9.98e-30;1!UBERON:0004089;1.33e-15;2!UBERON:0001905;2.05e-15;2!UBERON:0002757;2.05e-15;2!UBERON:0010134;2.05e-15;2!UBERON:0006955;2.05e-15;2!UBERON:0005408;2.05e-15;2!UBERON:0004801;2.05e-15;2!UBERON:0001899;2.05e-15;2!UBERON:0001708;1.82e-08;4!UBERON:0008895;1.82e-08;4!UBERON:0003296;2.26e-08;4!UBERON:0010133;2.26e-08;4!UBERON:0002784;2.26e-08;4!UBERON:0001474;2.77e-07;18!UBERON:0011159;5.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,9.99e-30,1;UBERON:0008193,9.99e-30,1;UBERON:0010912,9.99e-30,1;UBERON:0002514,9.99e-30,1;UBERON:0003457,9.99e-30,1;UBERON:0008907,9.99e-30,1;UBERON:0008001,9.99e-30,1;UBERON:0007213,9.99e-30,1;UBERON:0009891,9.99e-30,1;UBERON:0007914,9.99e-30,1;UBERON:0009292,9.99e-30,1;UBERON:0003099,9.99e-30,1;UBERON:0007375,9.99e-30,1;UBERON:0003323,9.99e-30,1;UBERON:0010258,9.99e-30,1;UBERON:0007842,9.99e-30,1;UBERON:0009494,9.99e-30,1;UBERON:0010042,9.99e-30,1;UBERON:0010045,9.99e-30,1;UBERON:0010259,9.99e-30,1;UBERON:0010359,9.99e-30,1;UBERON:0009526,9.99e-30,1;UBERON:0002397,9.99e-30,1;UBERON:0003113,9.99e-30,1;UBERON:0003277,9.99e-30,1;UBERON:0001709,9.99e-30,1;UBERON:0004066,9.99e-30,1;UBERON:0002244,9.99e-30,1;UBERON:0005620,9.99e-30,1;UBERON:0004362,9.99e-30,1;UBERON:0010364,9.99e-30,1;UBERON:0010046,9.99e-30,1;UBERON:0005868,9.99e-30,1;UBERON:0007238,9.99e-30,1;UBERON:0004288,9.99e-30,1;UBERON:0004068,9.99e-30,1;UBERON:0010334,9.99e-30,1;UBERON:0003852,9.99e-30,1;UBERON:0010253,9.99e-30,1;UBERON:0005253,1.33e-15,2;UBERON:0004089,1.33e-15,2;UBERON:0001905,1.54e-15,2;UBERON:0002757,1.54e-15,2;UBERON:0010134,1.54e-15,2;UBERON:0005408,1.54e-15,2;UBERON:0001899,1.54e-15,2;UBERON:0006955,2.74e-15,2;UBERON:0004801,2.74e-15,2;UBERON:0001708,1.82e-08,4;UBERON:0008895,1.82e-08,4;UBERON:0003296,1.96e-08,4;UBERON:0010133,1.96e-08,4;UBERON:0002784,1.96e-08,4;UBERON:0011159,5.08e-07,5 | |||
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| ||
|short_description=p7@SHOX2 | |short_description=p7@SHOX2 | ||
}} | }} |
Latest revision as of 08:16, 16 September 2015
Short description: | p7@SHOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SHOX2_5end |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | -30bp_to_ENST00000389589_5end |
EntrezGene: | SHOX2 |
HGNC: | 10854 |
UniProt: | O60902 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-15 | 2 |
fibroblast of gingiva | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.77e-07 | 5 |