FFCP PHASE1:Hg19::chr1:116915855..116915872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=476 | |EntrezGene=476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=799 | |HGNC=799 | ||
|TSSclassifier=strong | |||
|UniProt=P05023,E9PHR6 | |UniProt=P05023,E9PHR6 | ||
|association_with_transcript=-9bp_to_ENST00000295598,ENST00000445896_5end | |association_with_transcript=-9bp_to_ENST00000295598,ENST00000445896_5end | ||
|cluster_id=chr1:116915855..116915872,+ | |||
|description=CAGE_peak_1_at_ATP1A1_5end | |description=CAGE_peak_1_at_ATP1A1_5end | ||
|id=chr1:116915855..116915872,+ | |id=chr1:116915855..116915872,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.11e-07!42;CL:0000860!9.30e-07!45 | |ontology_enrichment_celltype=CL:0002057!2.11e-07!42;CL:0000860!9.30e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.46e-11;33!CL:0002057;2.46e-11;33!CL:0000473;1.20e-07;39!CL:0000234;1.20e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.11e-07,42;CL:0002057,2.11e-07,42;CL:0000223,9.43e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.25e-16!659;UBERON:0002050!4.63e-16!605;UBERON:0005423!4.63e-16!605;UBERON:0000923!4.67e-16!604;UBERON:0005291!4.67e-16!604;UBERON:0006598!4.67e-16!604;UBERON:0002532!4.67e-16!604;UBERON:0000922!6.72e-16!612;UBERON:0000467!1.32e-15!625;UBERON:0004111!1.54e-15!241;UBERON:0000480!2.75e-15!626;UBERON:0000062!7.29e-15!511;UBERON:0000025!1.18e-13!194;UBERON:0000477!4.14e-12!286;UBERON:0000119!3.80e-11!312;UBERON:0000483!4.17e-11!309;UBERON:0007023!1.09e-10!115;UBERON:0000481!3.26e-10!347;UBERON:0002346!2.11e-08!90;UBERON:0000924!2.14e-08!173;UBERON:0006601!2.14e-08!173;UBERON:0003914!2.63e-08!118;UBERON:0000033!8.30e-08!123;UBERON:0002616!2.00e-07!59;UBERON:0000153!3.07e-07!129;UBERON:0007811!3.07e-07!129;UBERON:0004121!3.38e-07!169;UBERON:0001049!6.15e-07!57;UBERON:0005068!6.15e-07!57;UBERON:0006241!6.15e-07!57;UBERON:0007135!6.15e-07!57;UBERON:0003075!6.21e-07!86;UBERON:0007284!6.21e-07!86;UBERON:0001048!8.64e-07!168 | |ontology_enrichment_uberon=UBERON:0000468!1.25e-16!659;UBERON:0002050!4.63e-16!605;UBERON:0005423!4.63e-16!605;UBERON:0000923!4.67e-16!604;UBERON:0005291!4.67e-16!604;UBERON:0006598!4.67e-16!604;UBERON:0002532!4.67e-16!604;UBERON:0000922!6.72e-16!612;UBERON:0000467!1.32e-15!625;UBERON:0004111!1.54e-15!241;UBERON:0000480!2.75e-15!626;UBERON:0000062!7.29e-15!511;UBERON:0000025!1.18e-13!194;UBERON:0000477!4.14e-12!286;UBERON:0000119!3.80e-11!312;UBERON:0000483!4.17e-11!309;UBERON:0007023!1.09e-10!115;UBERON:0000481!3.26e-10!347;UBERON:0002346!2.11e-08!90;UBERON:0000924!2.14e-08!173;UBERON:0006601!2.14e-08!173;UBERON:0003914!2.63e-08!118;UBERON:0000033!8.30e-08!123;UBERON:0002616!2.00e-07!59;UBERON:0000153!3.07e-07!129;UBERON:0007811!3.07e-07!129;UBERON:0004121!3.38e-07!169;UBERON:0001049!6.15e-07!57;UBERON:0005068!6.15e-07!57;UBERON:0006241!6.15e-07!57;UBERON:0007135!6.15e-07!57;UBERON:0003075!6.21e-07!86;UBERON:0007284!6.21e-07!86;UBERON:0001048!8.64e-07!168 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,9.06e-16,592;UBERON:0004111,3.82e-15,240;UBERON:0005423,5.19e-15,581;UBERON:0002050,4.57e-14,564;UBERON:0000923,9.15e-14,560;UBERON:0010316,9.15e-14,560;UBERON:0005291,9.15e-14,560;UBERON:0006598,9.15e-14,560;UBERON:0010317,9.15e-14,560;UBERON:0002532,9.15e-14,560;UBERON:0000025,1.42e-13,192;UBERON:0000119,5.67e-11,309;UBERON:0000483,6.22e-11,306;UBERON:0007023,2.36e-10,114;UBERON:0002346,1.42e-08,86;UBERON:0004121,1.81e-08,171;UBERON:0000924,1.81e-08,171;UBERON:0006601,1.81e-08,171;UBERON:0003914,2.48e-08,117;UBERON:0010371,3.26e-08,104;UBERON:0010314,2.68e-07,132;UBERON:0000073,3.83e-07,53;UBERON:0002616,3.83e-07,53;UBERON:0003075,4.55e-07,82;UBERON:0007284,4.55e-07,82;UBERON:0004872,4.80e-07,83;UBERON:0001049,7.32e-07,56;UBERON:0005068,7.32e-07,56;UBERON:0006241,7.32e-07,56;UBERON:0007135,7.32e-07,56 | |||
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|short_description=p1@ATP1A1 | |short_description=p1@ATP1A1 | ||
}} | }} |
Latest revision as of 08:47, 16 September 2015
Short description: | p1@ATP1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP1A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000295598, ENST00000445896_5end |
EntrezGene: | ATP1A1 |
HGNC: | 799 |
UniProt: | P05023E9PHR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.11e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.11e-07 | 42 |
endodermal cell | 9.43e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
embryo | 9.06e-16 | 592 |
anatomical conduit | 3.82e-15 | 240 |
developing anatomical structure | 5.19e-15 | 581 |
embryonic structure | 4.57e-14 | 564 |
germ layer | 9.15e-14 | 560 |
germ layer / neural crest | 9.15e-14 | 560 |
embryonic tissue | 9.15e-14 | 560 |
presumptive structure | 9.15e-14 | 560 |
germ layer / neural crest derived structure | 9.15e-14 | 560 |
epiblast (generic) | 9.15e-14 | 560 |
tube | 1.42e-13 | 192 |
cell layer | 5.67e-11 | 309 |
epithelium | 6.22e-11 | 306 |
adult organism | 2.36e-10 | 114 |
neurectoderm | 1.42e-08 | 86 |
ectoderm-derived structure | 1.81e-08 | 171 |
ectoderm | 1.81e-08 | 171 |
presumptive ectoderm | 1.81e-08 | 171 |
epithelial tube | 2.48e-08 | 117 |
ecto-epithelium | 3.26e-08 | 104 |
structure with developmental contribution from neural crest | 2.68e-07 | 132 |
regional part of nervous system | 3.83e-07 | 53 |
regional part of brain | 3.83e-07 | 53 |
neural plate | 4.55e-07 | 82 |
presumptive neural plate | 4.55e-07 | 82 |
splanchnic layer of lateral plate mesoderm | 4.80e-07 | 83 |
neural tube | 7.32e-07 | 56 |
neural rod | 7.32e-07 | 56 |
future spinal cord | 7.32e-07 | 56 |
neural keel | 7.32e-07 | 56 |