FFCP PHASE1:Hg19::chr10:112657929..112657944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27250 | |EntrezGene=27250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8763 | |HGNC=8763 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_AL049932_5end | |association_with_transcript=11bp_to_AL049932_5end | ||
|cluster_id=chr10:112657929..112657944,+ | |||
|description=CAGE_peak_2_at_PDCD4_5end | |description=CAGE_peak_2_at_PDCD4_5end | ||
|id=chr10:112657929..112657944,+ | |id=chr10:112657929..112657944,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.18e-20!172;CL:0000566!1.18e-20!172;CL:0002032!6.89e-20!165;CL:0000837!6.89e-20!165;CL:0002087!1.30e-19!119;CL:0000738!1.81e-19!140;CL:0002031!5.17e-19!124;CL:0000988!6.80e-19!182;CL:0000542!4.74e-13!53;CL:0000051!4.74e-13!53;CL:0000838!1.62e-12!52;CL:0000766!1.98e-09!76;CL:0000763!1.71e-08!112;CL:0000049!1.71e-08!112;CL:0000839!4.17e-08!70;CL:0000860!1.15e-07!45;CL:0000557!1.87e-07!71;CL:0002057!6.85e-07!42;CL:0002194!6.90e-07!63;CL:0000576!6.90e-07!63;CL:0000040!6.90e-07!63;CL:0000559!6.90e-07!63;CL:0000945!7.85e-07!24;CL:0000826!7.85e-07!24 | |ontology_enrichment_celltype=CL:0000037!1.18e-20!172;CL:0000566!1.18e-20!172;CL:0002032!6.89e-20!165;CL:0000837!6.89e-20!165;CL:0002087!1.30e-19!119;CL:0000738!1.81e-19!140;CL:0002031!5.17e-19!124;CL:0000988!6.80e-19!182;CL:0000542!4.74e-13!53;CL:0000051!4.74e-13!53;CL:0000838!1.62e-12!52;CL:0000766!1.98e-09!76;CL:0000763!1.71e-08!112;CL:0000049!1.71e-08!112;CL:0000839!4.17e-08!70;CL:0000860!1.15e-07!45;CL:0000557!1.87e-07!71;CL:0002057!6.85e-07!42;CL:0002194!6.90e-07!63;CL:0000576!6.90e-07!63;CL:0000040!6.90e-07!63;CL:0000559!6.90e-07!63;CL:0000945!7.85e-07!24;CL:0000826!7.85e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000542;7.56e-08;53!CL:0000945;8.61e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.73e-20,168;CL:0002032,5.00e-19,161;CL:0000837,5.00e-19,161;CL:0002087,8.76e-19,115;CL:0000738,1.30e-18,136;CL:0000988,1.38e-18,177;CL:0002031,3.44e-18,120;CL:0000542,4.71e-13,53;CL:0000051,4.71e-13,53;CL:0000838,1.62e-12,52;CL:0000766,1.01e-08,72;CL:0000763,7.81e-08,108;CL:0000049,7.81e-08,108;CL:0000839,2.02e-07,66;CL:0000860,6.83e-07,42;CL:0002057,6.83e-07,42;CL:0000945,7.84e-07,24;CL:0000826,7.84e-07,24;CL:0000557,8.68e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000051;7.56e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-09!102;UBERON:0003061!1.18e-09!102;UBERON:0002193!1.13e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.72e-09,98;UBERON:0003061,5.72e-09,98;UBERON:0002193,4.92e-08,108 | |||
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| ||
|short_description=p2@PDCD4 | |short_description=p2@PDCD4 | ||
}} | }} |
Latest revision as of 09:28, 16 September 2015
Short description: | p2@PDCD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDCD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_AL049932_5end |
EntrezGene: | PDCD4 |
HGNC: | 8763 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.73e-20 | 168 |
hematopoietic oligopotent progenitor cell | 5.00e-19 | 161 |
hematopoietic multipotent progenitor cell | 5.00e-19 | 161 |
nongranular leukocyte | 8.76e-19 | 115 |
leukocyte | 1.30e-18 | 136 |
hematopoietic cell | 1.38e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 3.44e-18 | 120 |
lymphocyte | 4.71e-13 | 53 |
common lymphoid progenitor | 4.71e-13 | 53 |
lymphoid lineage restricted progenitor cell | 1.62e-12 | 52 |
myeloid leukocyte | 1.01e-08 | 72 |
myeloid cell | 7.81e-08 | 108 |
common myeloid progenitor | 7.81e-08 | 108 |
myeloid lineage restricted progenitor cell | 2.02e-07 | 66 |
classical monocyte | 6.83e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.83e-07 | 42 |
lymphocyte of B lineage | 7.84e-07 | 24 |
pro-B cell | 7.84e-07 | 24 |
granulocyte monocyte progenitor cell | 8.68e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.72e-09 | 98 |
blood island | 5.72e-09 | 98 |
hemolymphoid system | 4.92e-08 | 108 |