FFCP PHASE1:Hg19::chr7:132261659..132261676,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:132261659..132261676,- to FFCP PHASE1:Hg19::chr7:132261659..132261676,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91584 | |EntrezGene=91584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9102 | |HGNC=9102 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCM2 | |UniProt=Q9HCM2 | ||
|association_with_transcript=-336bp_to_ENST00000321063,NM_001105543,NM_020911,uc003vra.3,uc003vrc.2_5end | |||
|cluster_id=chr7:132261659..132261676,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_PLXNA4_5end | |||
|id=chr7:132261659..132261676,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;1.01e-08;1!CL:0002372;1.01e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,8.36e-09,1;CL:0002372,8.36e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.38e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.17e-56!57;UBERON:0005068!3.17e-56!57;UBERON:0006241!3.17e-56!57;UBERON:0007135!3.17e-56!57;UBERON:0001017!3.19e-51!82;UBERON:0005743!4.20e-50!86;UBERON:0002616!2.34e-48!59;UBERON:0000073!8.49e-46!94;UBERON:0001016!8.49e-46!94;UBERON:0001869!1.72e-43!32;UBERON:0002020!2.29e-43!34;UBERON:0003528!2.29e-43!34;UBERON:0000955!2.35e-43!69;UBERON:0006238!2.35e-43!69;UBERON:0001893!4.11e-43!34;UBERON:0002791!2.68e-41!33;UBERON:0003080!3.13e-41!42;UBERON:0003075!1.21e-39!86;UBERON:0007284!1.21e-39!86;UBERON:0002780!1.29e-39!41;UBERON:0001890!1.29e-39!41;UBERON:0006240!1.29e-39!41;UBERON:0000956!1.68e-38!25;UBERON:0000203!1.68e-38!25;UBERON:0002619!7.88e-38!22;UBERON:0002346!3.27e-37!90;UBERON:0001950!1.95e-34!20;UBERON:0003056!1.49e-28!61;UBERON:0007023!1.39e-25!115;UBERON:0000033!1.70e-25!123;UBERON:0000153!8.66e-25!129;UBERON:0007811!8.66e-25!129;UBERON:0004121!2.30e-21!169;UBERON:0000924!1.69e-20!173;UBERON:0006601!1.69e-20!173;UBERON:0003076!1.50e-15!15;UBERON:0003057!1.50e-15!15;UBERON:0000025!1.23e-14!194;UBERON:0004733!1.25e-13!12;UBERON:0002028!1.25e-13!12;UBERON:0007277!1.25e-13!12;UBERON:0004732!2.15e-12!13;UBERON:0000200!9.30e-12!6;UBERON:0002021!4.01e-11!5;UBERON:0001871!4.62e-11!7;UBERON:0002298!6.30e-11!8;UBERON:0001872!2.38e-10!5;UBERON:0004111!4.19e-10!241;UBERON:0000349!1.44e-09!5;UBERON:0002680!2.65e-09!9;UBERON:0001895!2.65e-09!9;UBERON:0010092!2.65e-09!9;UBERON:0000475!4.53e-08!365;UBERON:0000064!7.02e-08!219;UBERON:0000477!8.68e-08!286;UBERON:0002308!3.26e-07!9;UBERON:0000125!3.26e-07!9;UBERON:0002420!5.57e-07!9;UBERON:0007245!5.57e-07!9;UBERON:0010009!5.57e-07!9;UBERON:0010011!5.57e-07!9;UBERON:0000454!5.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.95e-61;22!UBERON:0001869;3.35e-59;32!UBERON:0001950;6.52e-58;20!UBERON:0002791;9.54e-55;32!UBERON:0001893;5.76e-54;34!UBERON:0000956;8.63e-54;25!UBERON:0000203;8.63e-54;25!UBERON:0003528;1.20e-49;34!UBERON:0002020;1.20e-49;34!UBERON:0002780;4.17e-44;41!UBERON:0001890;4.17e-44;41!UBERON:0002021;6.04e-38;5!UBERON:0000073;6.16e-29;53!UBERON:0002616;6.16e-29;53!UBERON:0001017;1.32e-24;75!UBERON:0000955;1.21e-23;68!UBERON:0000200;7.08e-20;6!UBERON:0001016;5.94e-19;83!UBERON:0000369;3.47e-17;4!UBERON:0002435;3.47e-17;4!UBERON:0000204;3.47e-17;4!UBERON:0001872;7.25e-14;5!UBERON:0005383;8.44e-11;3!UBERON:0005382;8.44e-11;3!UBERON:0001871;3.07e-10;6!UBERON:0009663;4.68e-10;7!UBERON:0002902;3.57e-09;1!UBERON:0002022;3.57e-09;1!UBERON:0009899;3.57e-09;1!UBERON:0002581;1.01e-08;1!UBERON:0001882;1.01e-08;1!UBERON:0001874;1.01e-08;1!UBERON:0007190;1.01e-08;1!UBERON:0005403;1.01e-08;1!UBERON:0002420;6.29e-08;9!UBERON:0000125;6.29e-08;9!UBERON:0007245;6.29e-08;9!UBERON:0002308;6.29e-08;9!UBERON:0010009;6.29e-08;9!UBERON:0010011;6.29e-08;9!UBERON:0000454;6.29e-08;9!UBERON:0011216;1.66e-07;132!UBERON:0000349;8.15e-07;5!UBERON:0007023;8.55e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.40e-69,32;UBERON:0001893,2.01e-65,34;UBERON:0002791,6.55e-62,32;UBERON:0002619,2.87e-61,22;UBERON:0002780,3.50e-60,41;UBERON:0001890,3.50e-60,41;UBERON:0003080,3.50e-60,41;UBERON:0006240,3.50e-60,41;UBERON:0003528,3.37e-58,34;UBERON:0002020,3.37e-58,34;UBERON:0001950,5.80e-58,20;UBERON:0000956,6.51e-54,25;UBERON:0000203,6.51e-54,25;UBERON:0001049,2.43e-48,56;UBERON:0005068,2.43e-48,56;UBERON:0006241,2.43e-48,56;UBERON:0007135,2.43e-48,56;UBERON:0001017,2.61e-47,81;UBERON:0000073,4.66e-46,53;UBERON:0002616,4.66e-46,53;UBERON:0000955,5.56e-43,68;UBERON:0006238,5.56e-43,68;UBERON:0001016,2.68e-42,89;UBERON:0003056,1.13e-39,61;UBERON:0002021,4.52e-38,5;UBERON:0003075,4.42e-32,82;UBERON:0007284,4.42e-32,82;UBERON:0002346,1.93e-30,86;UBERON:0010371,1.34e-24,104;UBERON:0004121,1.81e-20,171;UBERON:0000924,1.81e-20,171;UBERON:0006601,1.81e-20,171;UBERON:0000200,4.81e-20,6;UBERON:0010314,1.19e-18,132;UBERON:0007023,1.36e-17,114;UBERON:0000369,8.68e-17,4;UBERON:0002435,8.68e-17,4;UBERON:0000204,8.68e-17,4;UBERON:0010082,8.68e-17,4;UBERON:0011216,2.71e-16,223;UBERON:0001872,1.11e-13,5;UBERON:0000025,1.07e-11,192;UBERON:0005383,1.14e-10,3;UBERON:0005382,1.14e-10,3;UBERON:0001871,2.98e-10,6;UBERON:0009663,7.83e-10,7;UBERON:0002022,3.87e-09,1;UBERON:0002902,4.19e-09,1;UBERON:0009899,4.19e-09,1;UBERON:0002581,7.75e-09,1;UBERON:0007190,9.02e-09,1;UBERON:0004111,1.28e-08,240;UBERON:0001874,1.65e-08,1;UBERON:0001882,2.22e-08,1;UBERON:0005403,2.22e-08,1;UBERON:0002420,9.34e-08,9;UBERON:0000125,9.34e-08,9;UBERON:0007245,9.34e-08,9;UBERON:0002308,9.34e-08,9;UBERON:0010009,9.34e-08,9;UBERON:0010011,9.34e-08,9;UBERON:0000454,9.34e-08,9;UBERON:0000483,8.15e-07,306;UBERON:0000349,9.73e-07,5 | |||
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| ||
|short_description=p5@PLXNA4 | |||
}} | }} |
Latest revision as of 10:32, 16 September 2015
Short description: | p5@PLXNA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLXNA4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -336bp_to_ENST00000321063, NM_001105543, NM_020911, uc003vra.3, uc003vrc.2_5end |
EntrezGene: | PLXNA4 |
HGNC: | 9102 |
UniProt: | Q9HCM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 8.36e-09 | 1 |
myotube | 8.36e-09 | 1 |