FFCP PHASE1:Hg19::chr2:242312343..242312376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9855 | |EntrezGene=9855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16460 | |HGNC=16460 | ||
|TSSclassifier=strong | |||
|UniProt=C9JWM9 | |UniProt=C9JWM9 | ||
|association_with_transcript=79bp_to_ENST00000445489_5end | |association_with_transcript=79bp_to_ENST00000445489_5end | ||
|cluster_id=chr2:242312343..242312376,+ | |||
|coexpression_cluster_id=C133 | |coexpression_cluster_id=C133 | ||
|description=CAGE_peak_4_at_FARP2_5end | |description=CAGE_peak_4_at_FARP2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000575;1.37e-13;2 | |ontology_enrichment_celltype_v019=CL:0000575;1.37e-13;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.55e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.35e-09;3!UBERON:0003057;1.35e-09;3 | |ontology_enrichment_development_v019=UBERON:0006241;1.35e-09;3!UBERON:0003057;1.35e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;6.43e-14;2 | |ontology_enrichment_disease_v019=DOID:3493;6.43e-14;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,6.43e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-19!115;UBERON:0002240!2.34e-10!3;UBERON:0003076!5.46e-09!15;UBERON:0003057!5.46e-09!15;UBERON:0005743!9.18e-09!86;UBERON:0000073!2.15e-08!94;UBERON:0001016!2.15e-08!94;UBERON:0001017!2.45e-08!82;UBERON:0003075!4.47e-08!86;UBERON:0007284!4.47e-08!86;UBERON:0002346!1.61e-07!90;UBERON:0001049!2.18e-07!57;UBERON:0005068!2.18e-07!57;UBERON:0006241!2.18e-07!57;UBERON:0007135!2.18e-07!57;UBERON:0002360!7.10e-07!2;UBERON:0000094!7.10e-07!2;UBERON:0007645!7.10e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!1.12e-19!115;UBERON:0002240!2.34e-10!3;UBERON:0003076!5.46e-09!15;UBERON:0003057!5.46e-09!15;UBERON:0005743!9.18e-09!86;UBERON:0000073!2.15e-08!94;UBERON:0001016!2.15e-08!94;UBERON:0001017!2.45e-08!82;UBERON:0003075!4.47e-08!86;UBERON:0007284!4.47e-08!86;UBERON:0002346!1.61e-07!90;UBERON:0001049!2.18e-07!57;UBERON:0005068!2.18e-07!57;UBERON:0006241!2.18e-07!57;UBERON:0007135!2.18e-07!57;UBERON:0002360!7.10e-07!2;UBERON:0000094!7.10e-07!2;UBERON:0007645!7.10e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;3.15e-26;1!UBERON:0002108;7.35e-21;4!UBERON:0000160;4.45e-13;17!UBERON:0005409;2.19e-10;22!UBERON:0002114;1.14e-09;2!UBERON:0002240;1.35e-09;3!UBERON:0005174;1.35e-09;3!UBERON:0001137;1.35e-09;3!UBERON:0001896;1.67e-09;3!UBERON:0005290;1.67e-09;3!UBERON:0000014;1.44e-07;4!UBERON:0000964;1.92e-07;4!UBERON:0010409;1.92e-07;4!UBERON:0000922;8.85e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0007029;3.15e-26;1!UBERON:0002108;7.35e-21;4!UBERON:0000160;4.45e-13;17!UBERON:0005409;2.19e-10;22!UBERON:0002114;1.14e-09;2!UBERON:0002240;1.35e-09;3!UBERON:0005174;1.35e-09;3!UBERON:0001137;1.35e-09;3!UBERON:0001896;1.67e-09;3!UBERON:0005290;1.67e-09;3!UBERON:0000014;1.44e-07;4!UBERON:0000964;1.92e-07;4!UBERON:0010409;1.92e-07;4!UBERON:0000922;8.85e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.78e-26,1;UBERON:0002108,8.13e-21,4;UBERON:0000160,4.45e-13,17;UBERON:0002114,1.19e-09,2;UBERON:0002240,1.30e-09,3;UBERON:0005174,1.30e-09,3;UBERON:0001137,1.30e-09,3;UBERON:0001896,1.67e-09,3;UBERON:0005290,1.67e-09,3;UBERON:0010096,1.67e-09,3;UBERON:0005409,2.91e-09,25;UBERON:0000014,1.40e-07,4;UBERON:0003076,1.49e-07,15;UBERON:0003057,1.49e-07,15;UBERON:0000964,2.04e-07,4;UBERON:0010409,2.04e-07,4;UBERON:0004348,2.04e-07,4;UBERON:0005427,2.04e-07,4 | |||
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| ||
|short_description=p4@FARP2 | |short_description=p4@FARP2 | ||
}} | }} |
Latest revision as of 10:35, 16 September 2015
Short description: | p4@FARP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FARP2_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 79bp_to_ENST00000445489_5end |
EntrezGene: | FARP2 |
HGNC: | 16460 |
UniProt: | C9JWM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
surface | 2.78e-26 | 1 |
small intestine | 8.13e-21 | 4 |
intestine | 4.45e-13 | 17 |
duodenum | 1.19e-09 | 2 |
spinal cord | 1.30e-09 | 3 |
dorsal region element | 1.30e-09 | 3 |
dorsum | 1.30e-09 | 3 |
medulla oblongata | 1.67e-09 | 3 |
myelencephalon | 1.67e-09 | 3 |
future myelencephalon | 1.67e-09 | 3 |
gastrointestinal system | 2.91e-09 | 25 |
zone of skin | 1.40e-07 | 4 |
posterior neural tube | 1.49e-07 | 15 |
chordal neural plate | 1.49e-07 | 15 |
cornea | 2.04e-07 | 4 |
eye surface | 2.04e-07 | 4 |
optic eminence | 2.04e-07 | 4 |
corneal primordium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.43e-14 | 2 |