FFCP PHASE1:Hg19::chr11:124622166..124622169,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23584 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17149 | |||
|TSSclassifier=strong | |||
|UniProt=Q96IQ7 | |||
|association_with_transcript=-32bp_to_ENST00000326621_5end | |||
|cluster_id=chr11:124622166..124622169,- | |||
|description=CAGE_peak_3_at_VSIG2_5end | |||
|id=chr11:124622166..124622169,- | |||
|ontology_enrichment_celltype=CL:0000068!1.91e-11!3;CL:0000069!1.91e-11!3;CL:0000307!1.91e-11!3;CL:0000377!1.91e-11!3;CL:0002368!4.34e-09!13;CL:0000244!7.64e-09!4;CL:0000731!7.64e-09!4;CL:0000575!3.41e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.95e-27;3!CL:0002202;7.91e-10;9!CL:0002632;7.91e-10;9!CL:0002368;4.45e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.11e-27,3;CL:0000069,3.11e-27,3;CL:0000307,3.11e-27,3;CL:0000377,3.11e-27,3;CL:0002202,9.24e-10,9;CL:0002632,9.24e-10,9;CL:0002368,4.95e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;1.95e-27;3!UBERON:0004874;5.16e-21;1!UBERON:0007123;9.55e-17;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.07e-12!169;UBERON:0000925!4.07e-12!169;UBERON:0006595!4.07e-12!169;UBERON:0001007!1.00e-08!155;UBERON:0001555!1.00e-08!155;UBERON:0007026!1.00e-08!155;UBERON:0003126!2.63e-08!7;UBERON:0001005!2.63e-08!7;UBERON:0000341!5.21e-08!2;UBERON:0004921!1.40e-07!129;UBERON:0004185!1.40e-07!129;UBERON:0000365!3.82e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;5.16e-21;1!UBERON:0008811;5.16e-21;1!UBERON:0002046;9.55e-17;5!UBERON:0003126;2.31e-12;7!UBERON:0001005;2.31e-12;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,3.45e-21,1;UBERON:0008811,3.45e-21,1;UBERON:0006258,3.45e-21,1;UBERON:0005876,3.45e-21,1;UBERON:0004874,3.45e-21,1;UBERON:0002046,1.03e-16,5;UBERON:0004117,1.03e-16,5;UBERON:0007689,1.03e-16,5;UBERON:0007123,1.03e-16,5;UBERON:0003091,1.03e-16,5;UBERON:0003126,2.82e-12,7;UBERON:0001005,2.82e-12,7;UBERON:0009722,4.04e-08,11;UBERON:0007690,4.04e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,2.01090682660736,1.08890984861323,0.188287601553558,0.43050537267123,3.36942951335251,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470958557103084,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,1.46301509978723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92134555298607,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.639701945702943,0.23806443146374,0,0,0,1.14564884900697,1.41482032270754,0,0,0.134704106029175,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@VSIG2 | |||
}} |
Latest revision as of 11:58, 16 September 2015
Short description: | p3@VSIG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VSIG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000326621_5end |
EntrezGene: | VSIG2 |
HGNC: | 17149 |
UniProt: | Q96IQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.11e-27 | 3 |
branched duct epithelial cell | 3.11e-27 | 3 |
tracheal epithelial cell | 3.11e-27 | 3 |
tracheoblast | 3.11e-27 | 3 |
epithelial cell of tracheobronchial tree | 9.24e-10 | 9 |
epithelial cell of lower respiratory tract | 9.24e-10 | 9 |
respiratory epithelial cell | 4.95e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
penis | 3.45e-21 | 1 |
intromittent organ | 3.45e-21 | 1 |
lateral plate mesenchyme | 3.45e-21 | 1 |
undifferentiated genital tubercle | 3.45e-21 | 1 |
somatopleure | 3.45e-21 | 1 |
thyroid gland | 1.03e-16 | 5 |
pharyngeal pouch | 1.03e-16 | 5 |
thyroid diverticulum | 1.03e-16 | 5 |
pharyngeal pouch 2 | 1.03e-16 | 5 |
thyroid primordium | 1.03e-16 | 5 |
trachea | 2.82e-12 | 7 |
respiratory airway | 2.82e-12 | 7 |
entire pharyngeal arch endoderm | 4.04e-08 | 11 |
early pharyngeal endoderm | 4.04e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.02e-11 | 2 |