FFCP PHASE1:Hg19::chr3:16555314..16555325,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23180 | |EntrezGene=23180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30278 | |HGNC=30278 | ||
|TSSclassifier=strong | |||
|UniProt=Q14699,Q8N5I0 | |UniProt=Q14699,Q8N5I0 | ||
|association_with_transcript=-92bp_to_NM_015150,uc003cay.2_5end | |association_with_transcript=-92bp_to_NM_015150,uc003cay.2_5end | ||
|cluster_id=chr3:16555314..16555325,- | |||
|coexpression_cluster_id=C4302 | |||
|description=CAGE_peak_9_at_RFTN1_5end | |description=CAGE_peak_9_at_RFTN1_5end | ||
|id=chr3:16555314..16555325,- | |id=chr3:16555314..16555325,- | ||
|ontology_enrichment_celltype=CL:0000945!9.79e-07!24;CL:0000826!9.79e-07!24 | |ontology_enrichment_celltype=CL:0000945!9.79e-07!24;CL:0000826!9.79e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002549;9.00e-12;2!CL:0002617;9.00e-12;2!CL:0000453;3.70e-11;5!CL:0000136;2.50e-10;13!CL:0000945;3.00e-10;24!CL:0000346;1.04e-08;3!CL:1000428;1.04e-08;3!CL:0002615;2.19e-08;3!CL:0002605;3.92e-08;3!CL:0002580;3.92e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,5.84e-12,2;CL:0002549,2.97e-11,2;CL:0000453,3.66e-11,5;CL:0000945,3.13e-10,24;CL:0000826,3.13e-10,24;CL:0000136,3.78e-09,15;CL:0000346,1.01e-08,3;CL:1000428,1.01e-08,3;CL:0000838,1.33e-08,52;CL:0002615,1.36e-08,3;CL:0000542,2.08e-08,53;CL:0000051,2.08e-08,53;CL:0002605,2.20e-08,3;CL:0002580,2.74e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.80e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.59e-13;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.29e-13,10;DOID:0060060,6.24e-07,1;DOID:0060061,6.24e-07,1;DOID:8691,6.24e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.99e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!2.99e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.74e-17;3!UBERON:0005629;9.00e-12;2!UBERON:0005358;9.00e-12;2!UBERON:0001886;9.00e-12;2!UBERON:0004086;9.00e-12;2!UBERON:0005282;9.00e-12;2!UBERON:0005281;9.00e-12;2!UBERON:0004177;2.79e-10;5!UBERON:0005057;2.79e-10;5!UBERON:0003688;7.88e-09;6!UBERON:0002358;7.88e-09;6!UBERON:0003684;7.88e-09;6!UBERON:0001178;7.88e-09;6!UBERON:0000310;8.33e-09;10!UBERON:0000412;1.04e-08;3!UBERON:0001992;1.04e-08;3!UBERON:0001443;5.17e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.36e-17,3;UBERON:0004854,8.36e-17,3;UBERON:0009034,8.36e-17,3;UBERON:0002095,8.36e-17,3;UBERON:0004782,8.36e-17,3;UBERON:0003281,8.36e-17,3;UBERON:0009664,8.36e-17,3;UBERON:0002296,8.36e-17,3;UBERON:0005602,8.36e-17,3;UBERON:0001179,8.36e-17,3;UBERON:0006293,8.36e-17,3;UBERON:0004457,7.93e-16,12;UBERON:0000042,7.93e-16,12;UBERON:0005629,2.97e-11,2;UBERON:0005358,2.97e-11,2;UBERON:0001886,2.97e-11,2;UBERON:0004086,2.97e-11,2;UBERON:0005282,2.97e-11,2;UBERON:0005281,2.97e-11,2;UBERON:0000310,5.75e-09,10;UBERON:0003688,8.13e-09,6;UBERON:0002358,8.13e-09,6;UBERON:0003684,8.13e-09,6;UBERON:0001178,8.13e-09,6;UBERON:0000412,1.01e-08,3;UBERON:0001992,1.01e-08,3;UBERON:0001443,3.69e-08,11;UBERON:0004177,1.76e-07,7;UBERON:0005057,1.76e-07,7;UBERON:0003887,2.04e-07,12 | |||
|phase1_expression=1.63510541343501,1.2846031433459,0.281908808191942,2.00146596706261,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.369363174230364,0,0.940364164434263,1.43117993565528,0.684372125364421,1.63205431473244,1.75750833220288,1.39571002064908,1.49550484495991,0,0,0,0,0,0,0.154934401160603,0.995184627411951,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,1.05950199351452,1.15235184896,0.234321431833797,0,0,0,0,0,0,0.408308342509787,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0.37223371266318,0,0.0974370051611986,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,4.69348596989448,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.514703430895577,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0.508189248444927,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,1.53461973288062,1.40330047216537,0,1.02341449813341,0,0,0,0,0.574890092096664,0,0.116210378459959,0.483437798366489,0,0,0,0,0.524497659837696,0,0,0.784349769176855,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,1.15362711958732,0,0,0.552567831062295,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,1.35920332841153,1.14864144456001,0,0,0,1.094728735294,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0.19871461170299,0.443175571691151,0,0.160317640503067,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0.509991088181609,0,0,0.136905378891993,0,0,1.31443677139657,0,0.229160424011684,0.717873024576814,0,0.858452096273142,0.446342914883745,0.268733889946905,0,0,0,0,0,0.0984274815147488,0.254019996197353,0.795229689809303,0,0,0,0,0.674921674654501,0,0.364497339948148,0,0.0788057072991982,0.104909176269996,0.316801009558219,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.427149650270779,0.628817220398664,0.414239055347196,0,0.395223263795889,3.77557054980777,0,1.63205341010842,0.5013797880454,0,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.310525913752519,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0.179088841081487,0.617602894321944,0,0,0,0,0,0,0,0.138258436151731,5.26122833866349,3.85308036908753,6.37905037597792,0,0.245772908753719,0,1.59989916683944,0,0,0,0,0,0,0.127894371303652,1.1860729253635,0,1.09209638192014,0,0,0,0,0,0.157723490002507,0,0,0.3062454773532,0.513833800771676,0,0.159633859057151,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0.206686796501184,0.253663240775627,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.460409414939944,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.643288897589907,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0.233939463462106,0,0,0,0,0.150962843566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| |phase1_expression=1.63510541343501,1.2846031433459,0.281908808191942,2.00146596706261,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.369363174230364,0,0.940364164434263,1.43117993565528,0.684372125364421,1.63205431473244,1.75750833220288,1.39571002064908,1.49550484495991,0,0,0,0,0,0,0.154934401160603,0.995184627411951,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,1.05950199351452,1.15235184896,0.234321431833797,0,0,0,0,0,0,0.408308342509787,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0.37223371266318,0,0.0974370051611986,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,4.69348596989448,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.514703430895577,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0.508189248444927,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,1.53461973288062,1.40330047216537,0,1.02341449813341,0,0,0,0,0.574890092096664,0,0.116210378459959,0.483437798366489,0,0,0,0,0.524497659837696,0,0,0.784349769176855,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,1.15362711958732,0,0,0.552567831062295,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,1.35920332841153,1.14864144456001,0,0,0,1.094728735294,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0.19871461170299,0.443175571691151,0,0.160317640503067,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0.509991088181609,0,0,0.136905378891993,0,0,1.31443677139657,0,0.229160424011684,0.717873024576814,0,0.858452096273142,0.446342914883745,0.268733889946905,0,0,0,0,0,0.0984274815147488,0.254019996197353,0.795229689809303,0,0,0,0,0.674921674654501,0,0.364497339948148,0,0.0788057072991982,0.104909176269996,0.316801009558219,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.427149650270779,0.628817220398664,0.414239055347196,0,0.395223263795889,3.77557054980777,0,1.63205341010842,0.5013797880454,0,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.310525913752519,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0.179088841081487,0.617602894321944,0,0,0,0,0,0,0,0.138258436151731,5.26122833866349,3.85308036908753,6.37905037597792,0,0.245772908753719,0,1.59989916683944,0,0,0,0,0,0,0.127894371303652,1.1860729253635,0,1.09209638192014,0,0,0,0,0,0.157723490002507,0,0,0.3062454773532,0.513833800771676,0,0.159633859057151,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0.206686796501184,0.253663240775627,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.460409414939944,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.643288897589907,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0.233939463462106,0,0,0,0,0.150962843566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| ||
|short_description=p9@RFTN1 | |short_description=p9@RFTN1 | ||
}} | }} |
Latest revision as of 13:14, 16 September 2015
Short description: | p9@RFTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RFTN1_5end |
Coexpression cluster: | C4302_migratory_lymphoma_mycosis_immature_B_Adipocyte_Hair |
Association with transcript: | -92bp_to_NM_015150, uc003cay.2_5end |
EntrezGene: | RFTN1 |
HGNC: | 30278 |
UniProt: | Q14699Q8N5I0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 5.84e-12 | 2 |
fibroblast of choroid plexus | 2.97e-11 | 2 |
Langerhans cell | 3.66e-11 | 5 |
lymphocyte of B lineage | 3.13e-10 | 24 |
pro-B cell | 3.13e-10 | 24 |
fat cell | 3.78e-09 | 15 |
hair follicle dermal papilla cell | 1.01e-08 | 3 |
stem cell of epidermis | 1.01e-08 | 3 |
lymphoid lineage restricted progenitor cell | 1.33e-08 | 52 |
adipocyte of omentum tissue | 1.36e-08 | 3 |
lymphocyte | 2.08e-08 | 53 |
common lymphoid progenitor | 2.08e-08 | 53 |
astrocyte of the cerebral cortex | 2.20e-08 | 3 |
preadipocyte of the breast | 2.74e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.36e-17 | 3 |
gastrointestinal system mesentery | 8.36e-17 | 3 |
stomach region | 8.36e-17 | 3 |
mesentery | 8.36e-17 | 3 |
gastrointestinal system serosa | 8.36e-17 | 3 |
mesentery of stomach | 8.36e-17 | 3 |
gut mesentery | 8.36e-17 | 3 |
dorsal mesentery | 8.36e-17 | 3 |
dorsal mesogastrium | 8.36e-17 | 3 |
peritoneal cavity | 8.36e-17 | 3 |
spleen primordium | 8.36e-17 | 3 |
cavity lining | 7.93e-16 | 12 |
serous membrane | 7.93e-16 | 12 |
vascular plexus | 2.97e-11 | 2 |
ventricle of nervous system | 2.97e-11 | 2 |
choroid plexus | 2.97e-11 | 2 |
brain ventricle | 2.97e-11 | 2 |
ventricular system of brain | 2.97e-11 | 2 |
ventricular system of central nervous system | 2.97e-11 | 2 |
breast | 5.75e-09 | 10 |
omentum | 8.13e-09 | 6 |
peritoneum | 8.13e-09 | 6 |
abdominal cavity | 8.13e-09 | 6 |
visceral peritoneum | 8.13e-09 | 6 |
dermal papilla | 1.01e-08 | 3 |
papillary layer of dermis | 1.01e-08 | 3 |
chest | 3.69e-08 | 11 |
hemopoietic organ | 1.76e-07 | 7 |
immune organ | 1.76e-07 | 7 |
intraembryonic coelom | 2.04e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.29e-13 | 10 |
non-Hodgkin lymphoma | 6.24e-07 | 1 |
cutaneous T cell lymphoma | 6.24e-07 | 1 |
mycosis fungoides | 6.24e-07 | 1 |