FFCP PHASE1:Hg19::chr10:11784487..11784496,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:11784487..11784496,+ to FFCP PHASE1:Hg19::chr10:11784487..11784496,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79746 | |EntrezGene=79746 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23489 | |HGNC=23489 | ||
|TSSclassifier=strong | |||
|UniProt=Q5W0J8 | |UniProt=Q5W0J8 | ||
|association_with_transcript=42bp_to_ENST00000420401_5end | |||
|cluster_id=chr10:11784487..11784496,+ | |||
|description=CAGE_peak_4_at_ECHDC3_5end | |||
|id=chr10:11784487..11784496,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.14e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.87e-20;3!CL:0000094;2.64e-13;8!CL:0000081;1.05e-09;11!CL:0000136;3.43e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.88e-20,3;CL:0000094,2.61e-13,8;CL:0000081,1.04e-09,11;CL:0000136,4.13e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0010226;8.01e-08;1!UBERON:0009143;1.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.85e-13;2!DOID:178;1.97e-07;1!DOID:326;1.97e-07;1!DOID:3978;1.97e-07;1!DOID:3394;1.97e-07;1!DOID:5844;1.97e-07;1!DOID:1287;3.71e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.35e-13,2;DOID:178,1.30e-07,1;DOID:326,1.30e-07,1;DOID:3978,1.30e-07,1;DOID:3394,1.30e-07,1;DOID:5844,1.30e-07,1;DOID:1287,3.18e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;4.42e-08;1!UBERON:0000026;4.42e-08;1!UBERON:0008784;4.42e-08;1!UBERON:0006058;4.42e-08;1!UBERON:0003663;4.42e-08;1!UBERON:0004256;4.42e-08;1!UBERON:0004708;4.42e-08;1!UBERON:0002101;4.42e-08;1!UBERON:0004709;4.42e-08;1!UBERON:0002529;4.42e-08;1!UBERON:0010538;4.42e-08;1!UBERON:0003661;4.42e-08;1!UBERON:0010890;4.42e-08;1!UBERON:0002471;4.42e-08;1!UBERON:0001383;4.42e-08;1!UBERON:0010758;4.42e-08;1!UBERON:0010707;4.42e-08;1!UBERON:0000978;4.42e-08;1!UBERON:0002103;4.42e-08;1!UBERON:0001665;4.42e-08;1!UBERON:0003823;4.42e-08;1!UBERON:0000154;4.42e-08;1!UBERON:0010709;4.42e-08;1!UBERON:0002084;8.01e-08;1!UBERON:0002082;8.01e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.57e-08,1;UBERON:0001389,4.57e-08,1;UBERON:0000026,4.57e-08,1;UBERON:0008784,4.57e-08,1;UBERON:0006058,4.57e-08,1;UBERON:0003663,4.57e-08,1;UBERON:0004256,4.57e-08,1;UBERON:0004708,4.57e-08,1;UBERON:0002101,4.57e-08,1;UBERON:0004709,4.57e-08,1;UBERON:0002529,4.57e-08,1;UBERON:0010538,4.57e-08,1;UBERON:0003661,4.57e-08,1;UBERON:0010890,4.57e-08,1;UBERON:0002471,4.57e-08,1;UBERON:0001383,4.57e-08,1;UBERON:0004357,4.57e-08,1;UBERON:0004347,4.57e-08,1;UBERON:0005420,4.57e-08,1;UBERON:0005732,4.57e-08,1;UBERON:0010758,4.57e-08,1;UBERON:0010707,4.57e-08,1;UBERON:0000978,4.57e-08,1;UBERON:0002103,4.57e-08,1;UBERON:0001665,4.57e-08,1;UBERON:0003823,4.57e-08,1;UBERON:0000154,4.57e-08,1;UBERON:0010709,4.57e-08,1;UBERON:0005733,4.57e-08,1;UBERON:0005730,4.57e-08,1;UBERON:0002084,8.84e-08,1;UBERON:0002082,8.84e-08,1;UBERON:0010226,8.84e-08,1 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0.786728553697808,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.601633342410425,0,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0.44931452458598,1.20141514273205,0.64290234678832,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.289693037921647,0,0.486634870302636,0,0,0,2.42311289670768,0.364295288292542,0,1.29818957461873,0.696518949197069,0.930705723632056,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0.357198913136319,0.44905874525234,0.225222960966644,0,0,0,2.63560834872127,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0.340296549480063,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0.982827216677626,4.72631925345123,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0.288732895522148,0.925971025153221,0.761016608938393,0,0,0.246217006087397,0.234004265139238,0,0,0,0.425325291727159,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.352193736052904,0.414656231081544,0.720599767084807,0.37872730027914,0.063497894292169,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,5.24304916763028,8.97484377612075,3.31532410748828,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0.862856803274467,0.426910231213777,0.606255142892519,0,0,0,0,0,0,0,0,0,0.308419387605311,0.355123450626254,0,0,0.116210378459959,0.120859449591622,0.601519410909855,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,1.23649213977267,0,0,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.847294206991012,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0,0,0.260427761085233,0,0.724999575434793,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0.141353071433941,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.391969589657511,0.0870592065804026,0,0,0.0967563312890851,0.146178634172371,0,1.55182426381471,0.0882561266915003,0,0.274083849293502,0,0,0,0,0.213452994739353,0,0.144090417154106,0,1.20116498503375,0,0,0.471388069233591,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,1.59743200399193,2.14613024068285,1.11585728720936,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0.412618309791701,0,0.2249738915515,0,0,0,1.73372556058236,0.419636705079985,0,0,0,0,3.31045985182716,0.25426853765475,0,0,0,0,0.082092520749339,0,0,3.95691030930823,1.32506888912221,0,0,0,0,0.640724475406168,0.157204305099666,0,0,0,0,1.27668251554036,2.72008901684737,7.0193170326356,4.59518365145192,3.93447156851765,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0.463044948647668,0,0,0.617602894321944,0.219284049578707,0,0.192914038270915,0.168942440653073,0.512483037175893,0.345430341731199,0,0,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0.118193840883968,0,0.156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| ||
|short_description=p4@ECHDC3 | |||
}} | }} |
Latest revision as of 13:40, 16 September 2015
Short description: | p4@ECHDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ECHDC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000420401_5end |
EntrezGene: | ECHDC3 |
HGNC: | 23489 |
UniProt: | Q5W0J8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.88e-20 | 3 |
granulocyte | 2.61e-13 | 8 |
blood cell | 1.04e-09 | 11 |
fat cell | 4.13e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.57e-08 | 1 |
soleus muscle | 4.57e-08 | 1 |
appendage | 4.57e-08 | 1 |
lower limb segment | 4.57e-08 | 1 |
multi-limb segment region | 4.57e-08 | 1 |
hindlimb muscle | 4.57e-08 | 1 |
hindlimb zeugopod muscle | 4.57e-08 | 1 |
paired limb/fin | 4.57e-08 | 1 |
limb | 4.57e-08 | 1 |
pelvic appendage | 4.57e-08 | 1 |
limb segment | 4.57e-08 | 1 |
paired limb/fin segment | 4.57e-08 | 1 |
limb muscle | 4.57e-08 | 1 |
pelvic complex muscle | 4.57e-08 | 1 |
zeugopod | 4.57e-08 | 1 |
muscle of leg | 4.57e-08 | 1 |
paired limb/fin bud | 4.57e-08 | 1 |
limb bud | 4.57e-08 | 1 |
pelvic appendage bud | 4.57e-08 | 1 |
limb/fin field | 4.57e-08 | 1 |
subdivision of organism along appendicular axis | 4.57e-08 | 1 |
appendage girdle complex | 4.57e-08 | 1 |
leg | 4.57e-08 | 1 |
hindlimb | 4.57e-08 | 1 |
triceps surae | 4.57e-08 | 1 |
hindlimb zeugopod | 4.57e-08 | 1 |
posterior region of body | 4.57e-08 | 1 |
pelvic complex | 4.57e-08 | 1 |
limb field | 4.57e-08 | 1 |
hindlimb/pelvic fin field | 4.57e-08 | 1 |
heart left ventricle | 8.84e-08 | 1 |
cardiac ventricle | 8.84e-08 | 1 |
future cardiac ventricle | 8.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.35e-13 | 2 |
vascular disease | 1.30e-07 | 1 |
ischemia | 1.30e-07 | 1 |
extrinsic cardiomyopathy | 1.30e-07 | 1 |
myocardial ischemia | 1.30e-07 | 1 |
myocardial infarction | 1.30e-07 | 1 |
cardiovascular system disease | 3.18e-07 | 4 |