FFCP PHASE1:Hg19::chr9:139781212..139781241,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr9:139781212..139781241,+ to FFCP PHASE1:Hg19::chr9:139781212..139781241,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100616480 | |EntrezGene=100616480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=41767 | |HGNC=41767 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_NR_039697_5end | |||
|cluster_id=chr9:139781212..139781241,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_1_at_MIR4479_5end | |||
|id=chr9:139781212..139781241,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.28e-28!140;CL:0000988!1.69e-23!182;CL:0000037!1.33e-21!172;CL:0000566!1.33e-21!172;CL:0002031!4.57e-20!124;CL:0002032!2.45e-19!165;CL:0000837!2.45e-19!165;CL:0002087!4.40e-18!119;CL:0000766!2.62e-15!76;CL:0000860!2.57e-14!45;CL:0000557!2.84e-14!71;CL:0002057!1.14e-12!42;CL:0000839!1.56e-12!70;CL:0002009!2.56e-12!65;CL:0000763!2.93e-12!112;CL:0000049!2.93e-12!112;CL:0002194!5.45e-11!63;CL:0000576!5.45e-11!63;CL:0000040!5.45e-11!63;CL:0000559!5.45e-11!63;CL:0000451!2.53e-08!10;CL:0000542!3.04e-07!53;CL:0000051!3.04e-07!53;CL:0000838!7.15e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000623;8.16e-23;3!CL:0000097;1.29e-14;5!CL:0000860;1.23e-09;33!CL:0002057;1.23e-09;33!CL:0000163;2.47e-08;9!CL:0000473;4.84e-08;39!CL:0000234;4.84e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,9.51e-23,3;CL:0000825,9.51e-23,3;CL:0000738,3.20e-20,136;CL:0002031,1.16e-18,120;CL:0000037,1.15e-15,168;CL:0002032,1.03e-14,161;CL:0000837,1.03e-14,161;CL:0000988,1.12e-14,177;CL:0000097,1.42e-14,5;CL:0002028,1.42e-14,5;CL:0000557,1.51e-11,67;CL:0002087,1.85e-11,115;CL:0000766,1.32e-10,72;CL:0000839,1.29e-09,66;CL:0000163,2.60e-08,9;CL:0000860,6.14e-08,42;CL:0002057,6.14e-08,42;CL:0000838,6.84e-08,52;CL:0000763,7.72e-08,108;CL:0000049,7.72e-08,108;CL:0000542,1.01e-07,53;CL:0000051,1.01e-07,53;CL:0000134,5.43e-07,354;CL:0000473,7.63e-07,48;CL:0000234,7.63e-07,48;CL:0002320,8.97e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.15e-11!80;UBERON:0002193!5.73e-11!112;UBERON:0002390!7.02e-11!102;UBERON:0003061!7.02e-11!102;UBERON:0001474!3.78e-10!86;UBERON:0002405!4.15e-08!115;UBERON:0004765!1.70e-07!101;UBERON:0001434!1.70e-07!101;UBERON:0001737!7.71e-07!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.65e-10,76;UBERON:0001474,4.08e-09,82;UBERON:0004765,3.79e-08,90;UBERON:0002405,7.92e-08,93;UBERON:0002390,2.45e-07,98;UBERON:0003061,2.45e-07,98;UBERON:0001434,3.73e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0.229240217243854,0.246301768349837,0.629686250509434,0.393364276848904,0.383829398097213,0.309632246632152,0,0.30120591877825,0,0,0.284338464974843,0,0,0.802177789880567,0.217010870715852,0,0,0,0.290796477559129,0,0.485168122375632,0.232429036905685,0,1.85823822537062,0.575384784644301,0.768482119587302,0.47296445977717,0,1.29096936716765,5.41705946377367,0.376484679085209,0.545812300115692,1.34834090667051,0.306083892370903,0.320929027076094,1.91801137739712,0,0,0,0,0.56738522469114,3.11411124497787,0.251248665256743,0,1.73751075764093,0.605399502633369,0.736555271975129,0.632924774881769,0,0.850417199860174,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,1.76171156811282,1.52909291250092,2.64342657158052,1.12101712596307,0,0.786839080455332,1.17903228824749,0.205601498999509,0,0,0,1.94826728407911,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,1.00803371612366,1.33720097891754,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,0,0,0.174129737299267,0.132957960518865,0.476981248610684,2.85997455390064,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,2.63560834872127,0,0,0,0,0.132409180813219,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0,0.723033089650446,0.772057809126758,0.435758888184812,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,9.74442143041629,2.01767934783746,11.1093341415214,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0.358121926479791,0.224170287987055,1.18218456121156,1.72502059887614,2.43851768931522,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0,0.492339221844278,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0,0.611030144933625,0.889563386041866,0.123563938946503,0.313265848516366,0,0,0,0,0,0,0,0,0,0,1.65355761355942,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0.438535902517113,0.246346371159628,0,0,0,0,0.397429223405979,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.449947783103001,4.6428117273477,0.121499113316049,0,0,0.0524545881349981,0.739202355635845,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0.358177682162975,0,0,0.176689145945881,0,0.168942440653073,0.512483037175893,0.345430341731199,0.911579868532147,0,0.389720617678777,0.398594520940089,0.163565394255844,0,0.245772908753719,0,0.39997479170986,0.213383459388282,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.576169937778896,0,0.0679697329768317,0,0,0,0.235479278551542,0,0,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0.399764623699716,0,0.352894871715692,0.0802413666891683,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,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| 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| ||
|short_description=p1@MIR4479 | |||
}} | }} |
Latest revision as of 14:02, 16 September 2015
Short description: | p1@MIR4479 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR4479_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 27bp_to_NR_039697_5end |
EntrezGene: | MIR4479 |
HGNC: | 41767 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 9.51e-23 | 3 |
pro-NK cell | 9.51e-23 | 3 |
leukocyte | 3.20e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 1.16e-18 | 120 |
hematopoietic stem cell | 1.15e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.03e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-14 | 161 |
hematopoietic cell | 1.12e-14 | 177 |
mast cell | 1.42e-14 | 5 |
basophil mast progenitor cell | 1.42e-14 | 5 |
granulocyte monocyte progenitor cell | 1.51e-11 | 67 |
nongranular leukocyte | 1.85e-11 | 115 |
myeloid leukocyte | 1.32e-10 | 72 |
myeloid lineage restricted progenitor cell | 1.29e-09 | 66 |
endocrine cell | 2.60e-08 | 9 |
classical monocyte | 6.14e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.14e-08 | 42 |
lymphoid lineage restricted progenitor cell | 6.84e-08 | 52 |
myeloid cell | 7.72e-08 | 108 |
common myeloid progenitor | 7.72e-08 | 108 |
lymphocyte | 1.01e-07 | 53 |
common lymphoid progenitor | 1.01e-07 | 53 |
mesenchymal cell | 5.43e-07 | 354 |
defensive cell | 7.63e-07 | 48 |
phagocyte | 7.63e-07 | 48 |
connective tissue cell | 8.97e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.65e-10 | 76 |
bone element | 4.08e-09 | 82 |
skeletal element | 3.79e-08 | 90 |
immune system | 7.92e-08 | 93 |
hematopoietic system | 2.45e-07 | 98 |
blood island | 2.45e-07 | 98 |
skeletal system | 3.73e-07 | 100 |